Conservation of cofitness between ECD_03444 and ECD_00741 in Escherichia coli BL21

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03444 L-threonine dehydrogenase 1.0 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent 0.29 45
Escherichia coli ECRC62 1.00 BNILDI_03780 yiaY L-threonine dehydrogenase 0.99 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00114 Alcohol dehydrogenase 2 0.99 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 73
Escherichia coli BW25113 1.00 b3589 yiaY predicted Fe-containing alcohol dehydrogenase (NCBI) 0.99 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_07750 yiaY L-threonine dehydrogenase 0.99 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 75
Escherichia fergusonii Becca 1.00 EFB2_00220 Alcohol dehydrogenase 2 0.99 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 86
Escherichia coli ECRC102 0.99 NIAGMN_13615 yiaY L-threonine dehydrogenase 0.99 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECRC98 0.99 JDDGAC_19485 yiaY L-threonine dehydrogenase 0.99 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 86
Escherichia coli ECRC101 0.99 MCAODC_06370 yiaY L-threonine dehydrogenase 0.99 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 87
Escherichia coli ECRC99 0.99 KEDOAH_12295 yiaY L-threonine dehydrogenase 0.99 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECOR38 0.99 HEPCGN_14690 yiaY L-threonine dehydrogenase 0.99 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 87
Escherichia coli ECRC100 0.99 OKFHMN_15855 yiaY L-threonine dehydrogenase 0.99 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 80
Escherichia coli Nissle 1917 0.98 ECOLIN_RS20505 L-threonine dehydrogenase 0.99 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 55
Serratia liquefaciens MT49 0.74 IAI46_19495 L-threonine dehydrogenase 0.75 IAI46_06520 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 86
Rhodospirillum rubrum S1H 0.69 Rru_A0930 Iron-containing alcohol dehydrogenase (NCBI) 0.20 Rru_A1541 Aminotransferase class-III (NCBI) low > 58
Pseudomonas simiae WCS417 0.69 PS417_06905 alcohol dehydrogenase 0.33 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS06965 L-threonine dehydrogenase 0.34 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 109
Pseudomonas fluorescens SBW25 0.69 PFLU_RS06965 L-threonine dehydrogenase 0.34 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 109
Dickeya dianthicola ME23 0.69 DZA65_RS12440 L-threonine dehydrogenase 0.75 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_3987 Iron-containing alcohol dehydrogenase 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme low > 86
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_2802 Alcohol dehydrogenase (EC 1.1.1.1) 0.34 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 103
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_3270 Alcohol dehydrogenase (EC 1.1.1.1) 0.34 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 87
Dickeya dianthicola 67-19 0.69 HGI48_RS11990 L-threonine dehydrogenase 0.75 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 71
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_3987 Iron-containing alcohol dehydrogenase 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme low > 86
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_04765 lactaldehyde reductase 0.34 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_17425 lactaldehyde reductase 0.34 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 101
Shewanella loihica PV-4 0.68 Shew_1166 iron-containing alcohol dehydrogenase (RefSeq) 0.56 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.68 Psest_0672 Alcohol dehydrogenase, class IV 0.34 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase low > 67
Shewanella amazonensis SB2B 0.68 Sama_2455 alcohol dehydrogenase II (RefSeq) 0.51 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) — —
Shewanella sp. ANA-3 0.67 Shewana3_2938 iron-containing alcohol dehydrogenase (RefSeq) 0.56 Shewana3_2520 aminotransferase (RefSeq) — —
Dickeya dadantii 3937 0.67 DDA3937_RS11900 L-threonine dehydrogenase 0.76 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 74
Rhodopseudomonas palustris CGA009 0.66 TX73_006190 L-threonine dehydrogenase 0.32 TX73_015405 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 86
Pseudomonas sp. RS175 0.66 PFR28_00654 Alcohol dehydrogenase 2 0.34 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 88
Shewanella oneidensis MR-1 0.66 SO1490 adhB alcohol dehydrogenase II (NCBI ptt file) 0.56 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) — —
Rahnella sp. WP5 0.59 EX31_RS00895 iron-containing alcohol dehydrogenase 0.73 EX31_RS23690 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 89
Acinetobacter radioresistens SK82 0.57 MPMX26_01765 1,3-propanediol dehydrogenase 0.57 MPMX26_02454 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase — —
Desulfovibrio vulgaris Miyazaki F 0.53 DvMF_0321 iron-containing alcohol dehydrogenase (RefSeq) 0.35 DvMF_1002 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.52 DVU2405 alcohol dehydrogenase, iron-containing (TIGR) 0.30 DVU2559 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (TIGR) low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF2262 Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22) 0.88 GFF670 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 78
Klebsiella michiganensis M5al 0.41 BWI76_RS00645 lactaldehyde reductase 0.87 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 92
Marinobacter adhaerens HP15 0.37 HP15_3135 ethanol oxidation regulatory protein ercA (from data) 0.33 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase low > 73
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_3512 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 0.34 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 87
Pseudomonas putida KT2440 0.33 PP_2682 Fe-containing alcohol dehydrogenase 0.34 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.17 55
Alteromonas macleodii MIT1002 0.32 MIT1002_01447 Lactaldehyde reductase 0.63 MIT1002_01378 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 70
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS17885 alcohol dehydrogenase 0.29 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 76
Ralstonia solanacearum UW163 0.28 UW163_RS21255 alcohol dehydrogenase 0.29 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Azospirillum brasilense Sp245 0.27 AZOBR_RS28580 alcohol dehydrogenase 0.33 AZOBR_RS31120 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 97
Agrobacterium fabrum C58 0.26 Atu5138 gamma hydroxybutyrate dehydrogenase 0.30 Atu4000 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 89
Paraburkholderia graminis OAS925 0.25 ABIE53_004445 alcohol dehydrogenase 0.30 ABIE53_000580 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 113
Rhizobium sp. OAE497 0.25 ABIE40_RS12020 iron-containing alcohol dehydrogenase 0.30 ABIE40_RS21060 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 107
Acidovorax sp. GW101-3H11 0.25 Ac3H11_2497 Alcohol dehydrogenase (EC 1.1.1.1) 0.29 Ac3H11_3828 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 79
Sinorhizobium meliloti 1021 0.25 SMc01582 alcohol dehydrogenase 0.21 SMc01534 omega amino acid--pyruvate transaminase low > 103
Phaeobacter inhibens DSM 17395 0.25 PGA1_c27200 alcohol dehydrogenase, iron containing 0.50 PGA1_c09150 adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA — —
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS00730 4-hydroxybutyrate dehydrogenase 0.28 HSERO_RS12250 adenosylmethionine--8-amino-7-oxononanoate aminotransferase low > 78
Variovorax sp. SCN45 0.24 GFF25 Alcohol dehydrogenase (EC 1.1.1.1) 0.32 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.47 21
Bosea sp. OAE506 0.24 ABIE41_RS11515 iron-containing alcohol dehydrogenase 0.21 ABIE41_RS05350 aspartate aminotransferase family protein low > 77
Variovorax sp. OAS795 0.24 ABID97_RS15955 iron-containing alcohol dehydrogenase 0.29 ABID97_RS16265 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 91
Ralstonia solanacearum PSI07 0.23 RPSI07_RS04360 4-hydroxybutyrate dehydrogenase 0.30 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 81
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS05010 iron-containing alcohol dehydrogenase 0.28 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Ralstonia solanacearum GMI1000 0.23 RS_RS21875 4-hydroxybutyrate dehydrogenase 0.29 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 80
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS12525 iron-containing alcohol dehydrogenase 0.30 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 80
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS11005 4-hydroxybutyrate dehydrogenase 0.27 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF4656 Alcohol dehydrogenase (EC 1.1.1.1) 0.31 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 90
Methanococcus maripaludis S2 0.22 MMP_RS04180 iron-containing alcohol dehydrogenase 0.25 MMP_RS04500 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 25

Not shown: 0 genomes with orthologs for ECD_03444 only; 33 genomes with orthologs for ECD_00741 only