Conservation of cofitness between ECD_03274 and ECD_00333 in Escherichia coli BL21

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03274 DNA-binding transcriptional repressor 1.0 ECD_00333 pyrroline-5-carboxylate reductase, NAD(P)-binding low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00281 Glycerol-3-phosphate regulon repressor 1.00 OHPLBJKB_03288 Pyrroline-5-carboxylate reductase low > 73
Escherichia coli BW25113 0.99 b3423 glpR DNA-binding transcriptional repressor (NCBI) 1.00 b0386 proC pyrroline-5-carboxylate reductase (NCBI) low > 76
Escherichia coli ECRC62 0.99 BNILDI_02780 glpR DeoR/GlpR family transcriptional regulator 1.00 BNILDI_22950 proC pyrroline-5-carboxylate reductase low > 75
Escherichia coli ECOR38 0.99 HEPCGN_15760 glpR DeoR/GlpR family transcriptional regulator 1.00 HEPCGN_07250 proC pyrroline-5-carboxylate reductase low > 87
Escherichia coli ECOR27 0.99 NOLOHH_08735 glpR DeoR/GlpR family transcriptional regulator 1.00 NOLOHH_01535 proC pyrroline-5-carboxylate reductase low > 75
Escherichia coli ECRC99 0.99 KEDOAH_11200 glpR DeoR/GlpR family transcriptional regulator 1.00 KEDOAH_19355 proC pyrroline-5-carboxylate reductase
Escherichia coli ECRC101 0.99 MCAODC_07470 glpR DeoR/GlpR family transcriptional regulator 1.00 MCAODC_27835 proC pyrroline-5-carboxylate reductase low > 87
Escherichia coli ECRC102 0.99 NIAGMN_14710 glpR DeoR/GlpR family transcriptional regulator 1.00 NIAGMN_06665 proC pyrroline-5-carboxylate reductase
Escherichia coli ECRC98 0.99 JDDGAC_20570 glpR DeoR/GlpR family transcriptional regulator 1.00 JDDGAC_12265 proC pyrroline-5-carboxylate reductase low > 86
Escherichia coli ECRC100 0.99 OKFHMN_16940 glpR DeoR/GlpR family transcriptional regulator 1.00 OKFHMN_08610 proC pyrroline-5-carboxylate reductase low > 80
Escherichia coli Nissle 1917 0.98 ECOLIN_RS19540 DeoR/GlpR family transcriptional regulator 1.00 ECOLIN_RS02345 pyrroline-5-carboxylate reductase
Escherichia fergusonii Becca 0.98 EFB2_00406 Glycerol-3-phosphate regulon repressor 0.99 EFB2_03670 Pyrroline-5-carboxylate reductase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF590 Glycerol-3-phosphate regulon repressor, DeoR family 0.97 GFF4283 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4123 transcriptional regulator, DeoR family 0.93 EX28DRAFT_2585 pyrroline-5-carboxylate reductase low > 76
Klebsiella michiganensis M5al 0.90 BWI76_RS26175 DeoR/GlpR family transcriptional regulator 0.94 BWI76_RS06170 pyrroline-5-carboxylate reductase
Enterobacter sp. TBS_079 0.90 MPMX20_04306 Glycerol-3-phosphate regulon repressor 0.93 MPMX20_00976 Pyrroline-5-carboxylate reductase low > 85
Dickeya dadantii 3937 0.81 DDA3937_RS19670 DeoR/GlpR family transcriptional regulator 0.28 DDA3937_RS17305 pyrroline-5-carboxylate reductase low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS19800 DeoR/GlpR family transcriptional regulator 0.26 HGI48_RS17350 pyrroline-5-carboxylate reductase
Dickeya dianthicola ME23 0.81 DZA65_RS20890 DeoR/GlpR family transcriptional regulator 0.26 DZA65_RS18440 pyrroline-5-carboxylate reductase
Pectobacterium carotovorum WPP14 0.81 HER17_RS01530 DeoR/GlpR family transcriptional regulator 0.28 HER17_RS03805 pyrroline-5-carboxylate reductase
Pantoea sp. MT58 0.80 IAI47_01765 DeoR/GlpR family transcriptional regulator 0.64 IAI47_14945 pyrroline-5-carboxylate reductase low > 76
Serratia liquefaciens MT49 0.79 IAI46_23910 DeoR/GlpR family transcriptional regulator 0.26 IAI46_21415 pyrroline-5-carboxylate reductase low > 86
Rahnella sp. WP5 0.79 EX31_RS04995 DeoR/GlpR family transcriptional regulator 0.26 EX31_RS02690 pyrroline-5-carboxylate reductase low > 89
Erwinia tracheiphila SCR3 0.78 LU632_RS23005 DeoR/GlpR family transcriptional regulator 0.71 LU632_RS18995 proC pyrroline-5-carboxylate reductase low > 74
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_18830 DeoR/GlpR family transcriptional regulator 0.27 CSW01_02450 pyrroline-5-carboxylate reductase 0.70 41
Pseudomonas sp. RS175 0.57 PFR28_03369 Glycerol-3-phosphate regulon repressor 0.26 PFR28_04243 Pyrroline-5-carboxylate reductase
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_18245 DeoR family transcriptional regulator 0.24 AO356_13420 pyrroline-5-carboxylate reductase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_3906 regulatory protein, DeoR 0.25 Psyr_0476 pyrroline-5-carboxylate reductase low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_3906 regulatory protein, DeoR 0.25 Psyr_0476 pyrroline-5-carboxylate reductase
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_5573 Glycerol-3-phosphate regulon repressor, DeoR family 0.24 Pf6N2E2_4600 Pyrroline-5-carboxylate reductase (EC 1.5.1.2)
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_04185 DeoR family transcriptional regulator 0.26 AO353_08165 pyrroline-5-carboxylate reductase low > 101
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1733 Glycerol-3-phosphate regulon repressor, DeoR family 0.25 PfGW456L13_1010 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) low > 87
Pseudomonas simiae WCS417 0.56 PS417_05570 DeoR faimly transcriptional regulator 0.27 PS417_26730 pyrroline-5-carboxylate reductase low > 88
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_768 Glycerol-3-phosphate regulon repressor, DeoR family 0.25 Pf1N1B4_2341 Pyrroline-5-carboxylate reductase (EC 1.5.1.2)
Pseudomonas fluorescens SBW25 0.56 PFLU_RS05655 DeoR/GlpR family transcriptional regulator 0.26 PFLU_RS28375 pyrroline-5-carboxylate reductase
Pseudomonas putida KT2440 0.56 PP_1074 DNA-binding transcriptional repressor - GlpR-glycerol-3-phosphate 0.27 PP_5095 pyrroline-5-carboxylate reductase low > 96
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS05655 DeoR/GlpR family transcriptional regulator 0.26 PFLU_RS28375 pyrroline-5-carboxylate reductase
Pseudomonas sp. S08-1 0.54 OH686_20365 Glycerol-3-phosphate regulon repressor GlpR 0.28 OH686_10980 pyrroline-5-carboxylate reductase low > 80
Pseudomonas stutzeri RCH2 0.54 Psest_2774 Transcriptional regulators of sugar metabolism 0.28 Psest_0283 pyrroline-5-carboxylate reductase
Alteromonas macleodii MIT1002 0.52 MIT1002_00199 Glycerol-3-phosphate regulon repressor 0.28 MIT1002_03062 Pyrroline-5-carboxylate reductase low > 70
Marinobacter adhaerens HP15 0.52 HP15_2167 transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate, DeoR family protein 0.29 HP15_287 pyrroline-5-carboxylate reductase low > 73
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.472.1 Glycerol-3-phosphate regulon repressor, DeoR family 0.24 Xcc-8004.1710.1 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) low > 74
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS02250 DeoR/GlpR family DNA-binding transcription regulator 0.26 QEN71_RS26600 pyrroline-5-carboxylate reductase 0.51 29
Sinorhizobium meliloti 1021 0.47 SMc02521 glycerol-3-phosphate regulon repressor transcription regulator protein 0.23 SMc02677 pyrroline-5-carboxylate reductase low > 103
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS16470 DeoR faimly transcriptional regulator 0.27 BPHYT_RS03490 pyrroline-5-carboxylate reductase
Agrobacterium fabrum C58 0.46 Atu3898 DeoR family transcriptional regulator 0.24 Atu2209 pyrroline-5-carboxylate reductase low > 89
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04225 transcriptional regulator, DeoR family 0.27 H281DRAFT_04679 pyrroline-5-carboxylate reductase low > 103
Azospirillum sp. SherDot2 0.46 MPMX19_05965 Glycerol-3-phosphate regulon repressor 0.22 MPMX19_01399 Pyrroline-5-carboxylate reductase
Variovorax sp. SCN45 0.46 GFF2678 Glycerol-3-phosphate regulon repressor GlpR 0.26 GFF5553 Pyrroline-5-carboxylate reductase (EC 1.5.1.2)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF2808 Glycerol-3-phosphate regulon repressor, DeoR family 0.25 GFF2806 Pyrroline-5-carboxylate reductase (EC 1.5.1.2)
Paraburkholderia graminis OAS925 0.45 ABIE53_003465 DeoR family glycerol-3-phosphate regulon repressor 0.27 ABIE53_000840 pyrroline-5-carboxylate reductase low > 113
Ralstonia solanacearum PSI07 0.45 RPSI07_RS09890 DeoR/GlpR transcriptional regulator 0.26 RPSI07_RS11720 pyrroline-5-carboxylate reductase low > 81
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS13795 DeoR family transcriptional regulator 0.26 RR42_RS17360 pyrroline-5-carboxylate reductase
Ralstonia solanacearum GMI1000 0.45 RS_RS15295 DeoR/GlpR transcriptional regulator 0.25 RS_RS13440 pyrroline-5-carboxylate reductase
Ralstonia solanacearum UW163 0.45 UW163_RS06265 DeoR/GlpR transcriptional regulator 0.26 UW163_RS08045 pyrroline-5-carboxylate reductase
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS07355 DeoR/GlpR transcriptional regulator 0.26 RALBFv3_RS05580 pyrroline-5-carboxylate reductase 0.39 70
Dinoroseobacter shibae DFL-12 0.44 Dshi_0631 transcriptional regulator, DeoR family (RefSeq) 0.23 Dshi_2645 pyrroline-5-carboxylate reductase (RefSeq)
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS03015 DeoR/GlpR family DNA-binding transcription regulator 0.26 ABZR87_RS01230 pyrroline-5-carboxylate reductase
Variovorax sp. OAS795 0.44 ABID97_RS19960 DeoR/GlpR family DNA-binding transcription regulator 0.24 ABID97_RS01555 pyrroline-5-carboxylate reductase
Rhizobium sp. OAE497 0.43 ABIE40_RS17880 DeoR/GlpR family DNA-binding transcription regulator 0.23 ABIE40_RS13005 pyrroline-5-carboxylate reductase low > 107
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS04835 DeoR faimly transcriptional regulator 0.25 HSERO_RS18990 pyrroline-5-carboxylate reductase
Azospirillum brasilense Sp245 0.43 AZOBR_RS25600 DeoR faimly transcriptional regulator 0.22 AZOBR_RS06245 pyrroline-5-carboxylate reductase
Rhodopseudomonas palustris CGA009 0.41 TX73_022865 DeoR/GlpR family DNA-binding transcription regulator 0.22 TX73_022630 pyrroline-5-carboxylate reductase
Phaeobacter inhibens DSM 17395 0.32 PGA1_c08250 putative glycerol-3-phosphate regulon repressor glpR 0.24 PGA1_c24700 pyrroline-5-carboxylate reductase ProC low > 62
Rhodanobacter denitrificans MT42 0.25 LRK55_RS01610 DeoR/GlpR family DNA-binding transcription regulator 0.27 LRK55_RS04030 pyrroline-5-carboxylate reductase
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS01820 DeoR/GlpR family DNA-binding transcription regulator 0.27 LRK54_RS04260 pyrroline-5-carboxylate reductase low > 59

Not shown: 1 genomes with orthologs for ECD_03274 only; 34 genomes with orthologs for ECD_00333 only