Conservation of cofitness between CSW01_07470 and CSW01_18235 in Vibrio cholerae E7946 ATCC 55056

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07470 ABC transporter ATP-binding protein 1.0 CSW01_18235 arginine decarboxylase 0.60 11
Dickeya dianthicola ME23 0.64 DZA65_RS13370 ABC transporter ATP-binding protein 0.52 DZA65_RS19595 biosynthetic arginine decarboxylase low > 75
Dickeya dianthicola 67-19 0.64 HGI48_RS12905 ABC transporter ATP-binding protein 0.52 HGI48_RS18460 biosynthetic arginine decarboxylase low > 71
Rahnella sp. WP5 0.64 EX31_RS18075 ABC transporter ATP-binding protein 0.51 EX31_RS21355 biosynthetic arginine decarboxylase low > 89
Dickeya dadantii 3937 0.63 DDA3937_RS12835 ABC transporter ATP-binding protein 0.52 DDA3937_RS18535 biosynthetic arginine decarboxylase low > 74
Escherichia coli ECOR38 0.63 HEPCGN_23245 uup ABC transporter ATP-binding protein 0.52 HEPCGN_18610 speA biosynthetic arginine decarboxylase 0.82 11
Enterobacter asburiae PDN3 0.63 EX28DRAFT_1994 ATPase components of ABC transporters with duplicated ATPase domains 0.52 EX28DRAFT_2978 arginine decarboxylase (EC 4.1.1.19) low > 76
Escherichia coli Nissle 1917 0.62 ECOLIN_RS04985 ABC transporter ATP-binding protein 0.52 ECOLIN_RS16350 biosynthetic arginine decarboxylase low > 55
Escherichia fergusonii Becca 0.62 EFB2_03122 ABC transporter ATP-binding protein uup 0.52 EFB2_00962 Biosynthetic arginine decarboxylase low > 86
Escherichia coli ECRC98 0.62 JDDGAC_08885 uup ABC transporter ATP-binding protein 0.52 JDDGAC_22935 speA biosynthetic arginine decarboxylase low > 87
Escherichia coli ECRC101 0.62 MCAODC_24665 uup ABC transporter ATP-binding protein 0.52 MCAODC_09825 speA biosynthetic arginine decarboxylase 0.30 67
Escherichia coli ECRC100 0.62 OKFHMN_05275 uup ABC transporter ATP-binding protein 0.52 OKFHMN_19305 speA biosynthetic arginine decarboxylase low > 79
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF3240 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.52 GFF3040 Biosynthetic arginine decarboxylase (EC 4.1.1.19) 0.54 54
Escherichia coli ECRC99 0.62 KEDOAH_22460 uup ABC transporter ATP-binding protein 0.52 KEDOAH_08835 speA biosynthetic arginine decarboxylase — —
Escherichia coli ECRC102 0.62 NIAGMN_02995 uup ABC transporter ATP-binding protein 0.52 NIAGMN_17070 speA biosynthetic arginine decarboxylase low > 80
Erwinia amylovora T8 0.62 OLJFJH_15970 ABC transporter ATP-binding protein 0.51 OLJFJH_08600 biosynthetic arginine decarboxylase 0.24 48
Serratia liquefaciens MT49 0.62 IAI46_08825 ABC transporter ATP-binding protein 0.52 IAI46_21140 biosynthetic arginine decarboxylase low > 87
Klebsiella michiganensis M5al 0.62 BWI76_RS09930 ABC transporter ATPase 0.52 BWI76_RS24030 arginine decarboxylase low > 92
Klebsiella pneumoniae MRSN742743 0.61 GJGHJB_03269 uup ABC transporter ATP-binding protein 0.52 GJGHJB_00746 speA biosynthetic arginine decarboxylase low > 83
Klebsiella pneumoniae MKP103 0.61 KDGMDA_18165 ABC transporter ATP-binding protein 0.52 KDGMDA_04560 biosynthetic arginine decarboxylase low > 94
Escherichia coli BL21 0.61 ECD_00953 replication regulatory ABC-F family DNA-binding ATPase 0.52 ECD_02768 biosynthetic arginine decarboxylase, PLP-binding 0.50 25
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_02717 ABC transporter ATP-binding protein uup 0.52 OHPLBJKB_00778 Biosynthetic arginine decarboxylase low > 74
Enterobacter sp. TBS_079 0.61 MPMX20_01600 ABC transporter ATP-binding protein uup 0.52 MPMX20_03799 Biosynthetic arginine decarboxylase low > 85
Pectobacterium carotovorum WPP14 0.61 HER17_RS11985 ABC transporter ATP-binding protein 0.50 HER17_RS02665 biosynthetic arginine decarboxylase low > 75
Escherichia coli ECOR27 0.61 NOLOHH_21830 uup ABC transporter ATP-binding protein 0.52 NOLOHH_11175 speA biosynthetic arginine decarboxylase 0.29 73
Escherichia coli BW25113 0.61 b0949 uup fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) 0.52 b2938 speA arginine decarboxylase (NCBI) low > 76
Escherichia coli ECRC62 0.61 BNILDI_19995 uup ABC transporter ATP-binding protein 0.52 BNILDI_09755 speA biosynthetic arginine decarboxylase low > 75
Pantoea agglomerans CFBP13505 P0401 0.61 PagCFBP13516_RS12770 ABC transporter ATP-binding protein 0.52 PagCFBP13516_RS03890 speA biosynthetic arginine decarboxylase low > 80
Erwinia tracheiphila HP pepo 2.2 0.61 IJEDHG_20485 ABC transporter ATP-binding protein 0.51 IJEDHG_03400 speA biosynthetic arginine decarboxylase low > 61
Pantoea sp. MT58 0.61 IAI47_12685 ABC transporter ATP-binding protein 0.52 IAI47_03660 biosynthetic arginine decarboxylase low > 76
Erwinia tracheiphila SCR3 0.61 LU632_RS09970 ABC transporter ATP-binding protein 0.51 LU632_RS05510 speA biosynthetic arginine decarboxylase low > 73
Alteromonas macleodii MIT1002 0.58 MIT1002_02038 ABC transporter ATP-binding protein uup 0.33 MIT1002_03905 Biosynthetic arginine decarboxylase low > 70
Shewanella sp. ANA-3 0.57 Shewana3_1603 ABC transporter ATPase component (RefSeq) 0.68 Shewana3_1624 arginine decarboxylase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.56 SO1853 ABC transporter, ATP-binding protein (NCBI ptt file) 0.67 SO1870 speA biosynthetic arginine decarboxylase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.56 Sama_1602 ABC transporter ATPase component (RefSeq) 0.67 Sama_1963 arginine decarboxylase (RefSeq) low > 62
Shewanella loihica PV-4 0.55 Shew_1814 ABC transporter ATPase component (RefSeq) 0.66 Shew_1619 arginine decarboxylase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_1925 ATPase components of ABC transporters with duplicated ATPase domains 0.50 B158DRAFT_1811 arginine decarboxylase (EC 4.1.1.19) 0.34 14
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS11545 ATP-binding cassette domain-containing protein 0.42 ABZR86_RS15580 biosynthetic arginine decarboxylase — —
Rhodanobacter sp000427505 FW510-R12 0.48 LRK53_RS16475 ATP-binding cassette domain-containing protein 0.42 LRK53_RS17950 arginine decarboxylase — —
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_11805 ccmA heme ABC exporter ATP-binding protein CcmA 0.43 OKGIIK_15625 speA biosynthetic arginine decarboxylase — —
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS12125 ATP-binding cassette domain-containing protein 0.43 LRK54_RS09140 arginine decarboxylase — —
Rhodanobacter denitrificans MT42 0.47 LRK55_RS11860 ATP-binding cassette domain-containing protein 0.43 LRK55_RS08900 arginine decarboxylase low > 63
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_3899 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.43 Pf1N1B4_1296 Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) low > 87
Pseudomonas segetis P6 0.46 ACVTMO_RS14860 ATP-binding cassette domain-containing protein 0.42 ACVTMO_RS20305 speA arginine decarboxylase 0.40 47
Pseudomonas protegens RBAN4 0.46 FABNJH_10140 uup ATPase components of ABC transporters with duplicated ATPase domains 0.43 FABNJH_03520 speA arginine decarboxylase — —
Pseudomonas stutzeri RCH2 0.46 Psest_1845 ATPase components of ABC transporters with duplicated ATPase domains 0.43 Psest_3366 Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) low > 67
Pseudomonas putida KT2440 0.46 PP_2131 DNA-binding ATPase involved in replication 0.42 PP_0567 Biosynthetic arginine decarboxylase low > 96
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_00525 ABC transporter ATP-binding protein 0.43 AO353_13720 arginine decarboxylase low > 101
Pseudomonas lactucae CFBP13502 0.45 GEMAOFIL_01644 ABC transporter ATP-binding protein uup 0.43 GEMAOFIL_00833 Biosynthetic arginine decarboxylase low > 96
Pseudomonas sp. BP01 0.45 JOY50_RS25020 ATP-binding cassette domain-containing protein 0.42 JOY50_RS23170 speA arginine decarboxylase low > 84
Pseudomonas sp. SVBP6 0.45 COO64_RS09375 ATP-binding cassette domain-containing protein 0.42 COO64_RS18405 speA arginine decarboxylase low > 91
Pseudomonas orientalis W4I3 0.45 QF045_RS10200 ATP-binding cassette domain-containing protein 0.43 QF045_RS06040 arginine decarboxylase low > 93
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS07635 ATP-binding cassette domain-containing protein 0.43 PFLU_RS03080 arginine decarboxylase low > 109
Pseudomonas sp. RS175 0.45 PFR28_01107 ABC transporter ATP-binding protein uup 0.43 PFR28_05228 Biosynthetic arginine decarboxylase low > 88
Pseudomonas fluorescens SBW25 0.45 PFLU_RS07635 ATP-binding cassette domain-containing protein 0.43 PFLU_RS03080 arginine decarboxylase low > 109
Pseudomonas sp. FW215-L2 0.45 GFF1228 ABC transporter ATP-binding protein uup 0.43 GFF1710 Biosynthetic arginine decarboxylase low > 111
Lysobacter sp. OAE881 0.44 ABIE51_RS12240 ribosomal protection-like ABC-F family protein 0.43 ABIE51_RS00125 arginine decarboxylase — —
Pseudomonas sp. S08-1 0.44 OH686_21905 Bis-ABC ATPase Uup 0.43 OH686_07545 arginine decarboxylase low > 80
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_4044 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.43 PfGW456L13_43 Biosynthetic arginine decarboxylase (EC 4.1.1.19) low > 87
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3294 ABC transporter 0.42 Psyr_4381 arginine decarboxylase low > 86
Pseudomonas simiae WCS417 0.44 PS417_07555 ABC transporter ATPase 0.43 PS417_03005 arginine decarboxylase 0.24 14
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3294 ABC transporter 0.42 Psyr_4381 arginine decarboxylase low > 86
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_2293 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.43 Pf6N2E2_3504 Biosynthetic arginine decarboxylase (EC 4.1.1.19) low > 103
Pseudomonas sp. DMC3 0.43 GFF1268 ABC transporter ATP-binding protein uup 0.43 GFF3322 Biosynthetic arginine decarboxylase low > 89
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_02345 ABC transporter ATP-binding protein 0.43 AO356_08155 arginine decarboxylase low > 104
Marinobacter adhaerens HP15 0.43 HP15_1508 ABC transporter ATPase component 0.53 HP15_272 biosynthetic arginine decarboxylase low > 73
Pseudomonas aeruginosa PA14 0.43 IKLFDK_15360 heme ABC exporter ATP-binding protein CcmA 0.42 IKLFDK_29370 arginine decarboxylase low > 98
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.2276.1 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.43 Xcc-8004.4909.1 Biosynthetic arginine decarboxylase (EC 4.1.1.19) — —
Pseudomonas aeruginosa MRSN321 0.43 PFGADD_01949 abc-f ribosomal protection-like ABC-F family protein 0.42 PFGADD_05071 speA arginine decarboxylase low > 99
Pseudomonas aeruginosa PUPa3 0.43 NPBIFN_01988 abc-f ribosomal protection-like ABC-F family protein 0.42 NPBIFN_05147 speA arginine decarboxylase low > 101
Desulfovibrio vulgaris Miyazaki F 0.38 DvMF_3061 ABC transporter related (RefSeq) 0.34 DvMF_1536 arginine decarboxylase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU1979 ABC transporter, ATP-binding protein (TIGR) 0.33 DVU0417 speA arginine decarboxylase (TIGR) 0.23 31
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_1381 ATPase 0.35 Synpcc7942_1037 speA arginine decarboxylase — —
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS13505 ABC-F family ATP-binding cassette domain-containing protein 0.39 HMPREF1078_RS15005 biosynthetic arginine decarboxylase low > 61

Not shown: 37 genomes with orthologs for CSW01_07470 only; 6 genomes with orthologs for CSW01_18235 only