Conservation of cofitness between CSW01_00290 and CSW01_13810 in Vibrio cholerae E7946 ATCC 55056

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00290 gamma carbonic anhydrase family protein 1.0 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.81 9
Shewanella amazonensis SB2B 0.70 Sama_0054 carbonic anhydrase (RefSeq) 0.38 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) low > 62
Shewanella oneidensis MR-1 0.70 SO0042 carbonic anhydrase, family 3 (NCBI ptt file) 0.36 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.69 Shewana3_0045 carbonic anhydrase (RefSeq) 0.36 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) low > 73
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS22570 gamma carbonic anhydrase family protein 0.77 PagCFBP13505_RS18350 phosphoenolpyruvate carboxykinase (ATP) low > 74
Alteromonas macleodii MIT1002 0.68 MIT1002_00030 carnitine operon protein CaiE 0.36 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] low > 70
Pseudomonas sp. RS175 0.68 PFR28_04700 Protein YrdA 0.34 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) low > 88
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4090 carbonic anhydrase, family 3 0.32 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 103
Shewanella loihica PV-4 0.67 Shew_3725 carbonic anhydrase (RefSeq) 0.37 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_11115 anhydrase 0.32 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] low > 104
Pseudomonas segetis P6 0.67 MPMX49_00360 Protein YrdA 0.32 MPMX49_00777 Phosphoenolpyruvate carboxykinase (ATP) low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF2399 carbonic anhydrase, family 3 0.81 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 78
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_10770 anhydrase 0.33 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] low > 101
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS00235 gamma carbonic anhydrase family protein 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas aeruginosa PA14 0.67 IKLFDK_25220 gamma carbonic anhydrase family protein 0.34 IKLFDK_27515 phosphoenolpyruvate carboxykinase low > 98
Pseudomonas aeruginosa PUPa3 0.67 DQ20_RS31165 gamma carbonic anhydrase family protein 0.34 DQ20_RS50285 phosphoenolpyruvate carboxykinase low > 101
Pseudomonas fluorescens SBW25 0.67 PFLU_RS00235 gamma carbonic anhydrase family protein 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Klebsiella michiganensis M5al 0.67 BWI76_RS25635 gamma carbonic anhydrase family protein 0.79 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) low > 92
Pseudomonas aeruginosa MRSN321 0.67 DY961_RS26595 gamma carbonic anhydrase family protein 0.34 DY961_RS11825 phosphoenolpyruvate carboxykinase
Enterobacter sp. TBS_079 0.66 MPMX20_04187 Protein YrdA 0.79 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Pseudomonas simiae WCS417 0.66 PS417_00240 anhydrase 0.34 PS417_01210 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_1843 carbonic anhydrase, family 3 0.34 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Serratia liquefaciens MT49 0.66 IAI46_23235 gamma carbonic anhydrase family protein 0.81 IAI46_23770 phosphoenolpyruvate carboxykinase (ATP) low > 87
Pseudomonas sp. DMC3 0.66 GFF664 Protein YrdA 0.33 GFF4175 Phosphoenolpyruvate carboxykinase (ATP) low > 89
Pseudomonas lactucae CFBP13502 0.66 GEMAOFIL_00253 Protein YrdA 0.35 GEMAOFIL_00469 Phosphoenolpyruvate carboxykinase (ATP) low > 96
Rahnella sp. WP5 0.66 EX31_RS15945 gamma carbonic anhydrase family protein 0.79 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Pseudomonas sp. S08-1 0.66 OH686_12365 Protein YrdA 0.32 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) low > 80
Pseudomonas sp. SVBP6 0.66 COO64_RS02330 gamma carbonic anhydrase family protein 0.33 COO64_RS00660 phosphoenolpyruvate carboxykinase low > 93
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_00424 Protein YrdA 0.81 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) low > 74
Escherichia coli ECRC101 0.65 MCAODC_08095 yrdA Protein YrdA 0.81 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia coli ECRC99 0.65 KEDOAH_10575 yrdA Protein YrdA 0.81 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP)
Escherichia coli ECRC62 0.65 BNILDI_02155 yrdA Protein YrdA 0.81 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) low > 75
Escherichia coli ECRC100 0.65 OKFHMN_17575 yrdA Protein YrdA 0.81 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) low > 79
Escherichia coli ECRC98 0.65 JDDGAC_21195 yrdA Protein YrdA 0.81 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Pseudomonas orientalis W4I3 0.65 QF045_RS03185 gamma carbonic anhydrase family protein 0.35 QF045_RS04340 phosphoenolpyruvate carboxykinase low > 93
Escherichia coli ECOR38 0.65 HEPCGN_16395 yrdA Protein YrdA 0.81 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) low > 88
Escherichia coli ECOR27 0.65 NOLOHH_09365 yrdA Protein YrdA 0.81 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) low > 76
Escherichia coli ECRC102 0.65 NIAGMN_15335 yrdA Protein YrdA 0.81 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) low > 80
Escherichia coli BW25113 0.65 b3279 yrdA putative transferase (VIMSS) 0.81 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) low > 76
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_625 carbonic anhydrase, family 3 0.33 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 87
Enterobacter asburiae PDN3 0.65 EX28DRAFT_0048 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 0.79 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Pseudomonas stutzeri RCH2 0.65 Psest_4319 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 0.33 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) low > 67
Pseudomonas sp. BP01 0.65 JOY50_RS21250 gamma carbonic anhydrase family protein 0.33 JOY50_RS18315 phosphoenolpyruvate carboxykinase low > 84
Escherichia coli BL21 0.65 ECD_03130 bacterial transferase hexapeptide domain protein 0.81 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] low > 61
Escherichia coli Nissle 1917 0.65 ECOLIN_RS18830 gamma carbonic anhydrase family protein 0.81 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) low > 55
Escherichia fergusonii Becca 0.65 EFB2_00544 Protein YrdA 0.81 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Dickeya dadantii 3937 0.64 DDA3937_RS19090 gamma carbonic anhydrase family protein 0.81 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) low > 74
Pantoea sp. MT58 0.64 IAI47_02325 gamma carbonic anhydrase family protein 0.77 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) low > 76
Klebsiella pneumoniae MKP103 0.64 KDGMDA_06505 gamma carbonic anhydrase family protein 0.81 KDGMDA_06970 phosphoenolpyruvate carboxykinase (ATP) low > 95
Erwinia tracheiphila HP pepo 2.2 0.64 IJEDHG_12515 Gamma carbonic anhydrase family protein 0.78 IJEDHG_11970 pckA phosphoenolpyruvate carboxykinase (ATP) low > 61
Erwinia tracheiphila SCR3 0.64 LU632_RS22435 gamma carbonic anhydrase family protein 0.78 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) low > 73
Erwinia amylovora T8 0.63 OLJFJH_03675 gamma carbonic anhydrase family protein 0.78 OLJFJH_04150 phosphoenolpyruvate carboxykinase (ATP) low > 58
Dickeya dianthicola 67-19 0.63 HGI48_RS19180 gamma carbonic anhydrase family protein 0.81 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) low > 71
Dickeya dianthicola ME23 0.63 DZA65_RS20305 gamma carbonic anhydrase family protein 0.81 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) low > 75
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_0044 transferase hexapeptide repeat protein 0.33 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Pectobacterium carotovorum WPP14 0.63 HER17_RS02260 gamma carbonic anhydrase family protein 0.80 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_0044 transferase hexapeptide repeat protein 0.33 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP)
Marinobacter adhaerens HP15 0.58 HP15_3758 transferase hexapeptide repeat protein 0.36 HP15_3498 phosphoenolpyruvate carboxykinase (ATP)
Kangiella aquimarina DSM 16071 0.55 B158DRAFT_0464 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 0.76 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP)
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_14360 gamma carbonic anhydrase family protein 0.44 CA264_05270 phosphoenolpyruvate carboxykinase (ATP)
Sphingobium sp. HT1-2 0.39 GFF1600 Carbonic anhydrase, gamma class (EC 4.2.1.1) 0.40 GFF3825 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 95
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS21190 gamma carbonic anhydrase family protein 0.41 CA265_RS23490 phosphoenolpyruvate carboxykinase (ATP) low > 88
Cellulophaga baltica 18 0.38 M666_RS07850 gamma carbonic anhydrase family protein 0.43 M666_RS03005 phosphoenolpyruvate carboxykinase (ATP) low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.36 Echvi_2335 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 0.42 Echvi_2957 phosphoenolpyruvate carboxykinase (ATP)
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS03850 gamma carbonic anhydrase family protein 0.72 ABI39_RS06685 phosphoenolpyruvate carboxykinase (ATP)
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_0268 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 0.39 Ga0059261_0913 phosphoenolpyruvate carboxykinase (ATP) low > 68
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS09460 gamma carbonic anhydrase family protein 0.72 HMPREF1058_RS10065 phosphoenolpyruvate carboxykinase (ATP)
Bacteroides thetaiotaomicron VPI-5482 0.35 BT2744 acetyltransferase (NCBI ptt file) 0.73 BT2790 phosphoenolpyruvate carboxykinase [ATP] (NCBI ptt file)
Bacteroides ovatus ATCC 8483 0.34 BACOVA_01053 hexapeptide transferase family protein 0.72 BACOVA_02011 phosphoenolpyruvate carboxykinase (ATP)
Bacteroides stercoris CC31F 0.34 HMPREF1181_RS00640 gamma carbonic anhydrase family protein 0.72 HMPREF1181_RS01170 phosphoenolpyruvate carboxykinase (ATP)
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS13110 gamma carbonic anhydrase family protein 0.72 HMPREF1078_RS07235 phosphoenolpyruvate carboxykinase (ATP)
Rhizobium sp. OAE497 0.34 ABIE40_RS10925 gamma carbonic anhydrase family protein 0.40 ABIE40_RS19415 phosphoenolpyruvate carboxykinase low > 107
Sinorhizobium meliloti 1021 0.33 SMc04241 acetyltransferase 0.41 SMc02562 phosphoenolpyruvate carboxykinase low > 103
Rhodopseudomonas palustris CGA009 0.32 TX73_017715 gamma carbonic anhydrase family protein 0.42 TX73_001865 phosphoenolpyruvate carboxykinase
Phaeobacter inhibens DSM 17395 0.32 PGA1_c15820 putative phenylacetic acid degradation protein 0.39 PGA1_c01140 phosphoenolpyruvate carboxykinase low > 62
Dinoroseobacter shibae DFL-12 0.32 Dshi_1530 transferase hexapeptide repeat containing protein (RefSeq) 0.39 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) low > 64
Xanthobacter sp. DMC5 0.31 GFF4616 Protein YrdA 0.40 GFF4136 Phosphoenolpyruvate carboxykinase (ATP)
Agrobacterium fabrum C58 0.29 Atu1517 hypothetical protein 0.42 Atu0035 phosphoenolpyruvate carboxykinase low > 89
Bosea sp. OAE506 0.27 ABIE41_RS14005 gamma carbonic anhydrase family protein 0.40 ABIE41_RS02665 phosphoenolpyruvate carboxykinase

Not shown: 39 genomes with orthologs for CSW01_00290 only; 1 genomes with orthologs for CSW01_13810 only