Conservation of cofitness between CSW01_06215 and CSW01_13445 in Vibrio cholerae E7946 ATCC 55056

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06215 phosphoribosylglycinamide formyltransferase 2 1.0 CSW01_13445 elongation factor P 0.73 7
Shewanella amazonensis SB2B 0.71 Sama_2807 purT phosphoribosylglycinamide formyltransferase 2 (RefSeq) 0.26 Sama_1699 elongation factor P (RefSeq) — —
Escherichia coli BL21 0.71 ECD_01820 phosphoribosylglycinamide formyltransferase 2 0.78 ECD_04017 polyproline-specific translation elongation factor EF-P — —
Escherichia fergusonii Becca 0.71 EFB2_02094 Formate-dependent phosphoribosylglycinamide formyltransferase 0.78 EFB2_04388 Elongation factor P — —
Escherichia coli ECRC62 0.71 BNILDI_15655 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.78 BNILDI_06840 Elongation factor P — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_01880 Formate-dependent phosphoribosylglycinamide formyltransferase 0.78 OHPLBJKB_03895 Elongation factor P — —
Escherichia coli BW25113 0.70 b1849 purT phosphoribosylglycinamide formyltransferase 2 (NCBI) 0.78 b4147 efp elongation factor P (NCBI) — —
Escherichia coli ECOR27 0.70 NOLOHH_16860 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.78 NOLOHH_04650 Elongation factor P — —
Escherichia coli ECOR38 0.70 HEPCGN_04755 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.78 HEPCGN_10615 Elongation factor P — —
Escherichia coli ECRC102 0.70 NIAGMN_01710 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.78 NIAGMN_10235 Elongation factor P — —
Escherichia coli ECRC99 0.70 KEDOAH_01755 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.78 KEDOAH_15775 Elongation factor P — —
Escherichia coli ECRC100 0.70 OKFHMN_26350 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.78 OKFHMN_12390 Elongation factor P — —
Escherichia coli ECRC98 0.70 JDDGAC_00925 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.78 JDDGAC_16025 Elongation factor P — —
Escherichia coli ECRC101 0.70 MCAODC_19055 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.78 MCAODC_02900 Elongation factor P — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF1628 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) 0.78 GFF2005 Translation elongation factor P — —
Erwinia amylovora T8 0.70 OLJFJH_12905 formate-dependent phosphoribosylglycinamide formyltransferase 0.74 OLJFJH_02585 elongation factor P — —
Dickeya dianthicola ME23 0.69 DZA65_RS10590 formate-dependent phosphoribosylglycinamide formyltransferase 0.74 DZA65_RS20205 elongation factor P — —
Erwinia tracheiphila SCR3 0.69 LU632_RS13350 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.74 LU632_RS01885 efp elongation factor P — —
Klebsiella michiganensis M5al 0.69 BWI76_RS18090 phosphoribosylglycinamide formyltransferase 2 0.79 BWI76_RS02415 elongation factor P — —
Shewanella sp. ANA-3 0.69 Shewana3_3197 purT phosphoribosylglycinamide formyltransferase 2 (RefSeq) 0.24 Shewana3_2141 elongation factor P (RefSeq) — —
Dickeya dadantii 3937 0.69 DDA3937_RS10145 formate-dependent phosphoribosylglycinamide formyltransferase 0.73 DDA3937_RS18995 elongation factor P — —
Dickeya dianthicola 67-19 0.69 HGI48_RS10175 formate-dependent phosphoribosylglycinamide formyltransferase 0.74 HGI48_RS19085 elongation factor P — —
Pectobacterium carotovorum WPP14 0.68 HER17_RS11770 formate-dependent phosphoribosylglycinamide formyltransferase 0.72 HER17_RS02355 elongation factor P — —
Serratia liquefaciens MT49 0.68 IAI46_14770 formate-dependent phosphoribosylglycinamide formyltransferase 0.72 IAI46_01510 elongation factor P — —
Shewanella oneidensis MR-1 0.68 SO3613 purT phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) 0.24 SO2328 efp translation elongation factor P (NCBI ptt file) — —
Pantoea sp. MT58 0.68 IAI47_08505 formate-dependent phosphoribosylglycinamide formyltransferase 0.71 IAI47_17290 elongation factor P — —
Rahnella sp. WP5 0.67 EX31_RS24735 formate-dependent phosphoribosylglycinamide formyltransferase 0.70 EX31_RS08935 elongation factor P — —
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_2254 formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-) 0.67 B158DRAFT_0985 translation elongation factor P low > 40
Enterobacter sp. TBS_079 0.67 MPMX20_02754 Formate-dependent phosphoribosylglycinamide formyltransferase 0.77 MPMX20_00426 Elongation factor P — —
Marinobacter adhaerens HP15 0.66 HP15_1245 phosphoribosylglycinamide formyltransferase 2 0.66 HP15_2513 translation elongation factor P — —
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0707 formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-) 0.78 EX28DRAFT_3343 translation elongation factor P — —
Pseudomonas aeruginosa PA14 0.65 IKLFDK_19150 formate-dependent phosphoribosylglycinamide formyltransferase 0.24 IKLFDK_14480 elongation factor P — —
Pseudomonas stutzeri RCH2 0.64 Psest_3137 phosphoribosylglycinamide formyltransferase 2 0.24 Psest_1799 translation elongation factor P — —
Rhodanobacter sp000427505 FW510-R12 0.64 LRK53_RS14035 formate-dependent phosphoribosylglycinamide formyltransferase 0.64 LRK53_RS07465 elongation factor P — —
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_03390 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.63 OKGIIK_09535 Elongation factor P — —
Desulfovibrio vulgaris Hildenborough JW710 0.63 DVU0723 purT phosphoribosylglycinamide formyltransferase 2 (TIGR) 0.39 DVU1666 efp translation elongation factor P (TIGR) low > 55
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS14545 formate-dependent phosphoribosylglycinamide formyltransferase 0.63 LRK54_RS02480 elongation factor P — —
Rhodanobacter denitrificans MT42 0.63 LRK55_RS14260 formate-dependent phosphoribosylglycinamide formyltransferase 0.63 LRK55_RS02235 elongation factor P — —
Desulfovibrio vulgaris Miyazaki F 0.62 DvMF_2756 purT phosphoribosylglycinamide formyltransferase 2 (RefSeq) 0.39 DvMF_0372 translation elongation factor P (RefSeq) low > 51
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.3846.1 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) 0.60 Xcc-8004.2286.1 Translation elongation factor P — —
Parabacteroides merdae CL09T00C40 0.61 HMPREF1078_RS10980 formate-dependent phosphoribosylglycinamide formyltransferase 0.27 HMPREF1078_RS04925 elongation factor P low > 61
Lysobacter sp. OAE881 0.61 ABIE51_RS14525 formate-dependent phosphoribosylglycinamide formyltransferase 0.67 ABIE51_RS13500 elongation factor P — —
Dechlorosoma suillum PS 0.58 Dsui_1003 phosphoribosylglycinamide formyltransferase 2 0.30 Dsui_2467 translation elongation factor P — —
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS00765 formate-dependent phosphoribosylglycinamide formyltransferase 0.29 A4249_RS08830 elongation factor P — —
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS06125 phosphoribosylglycinamide formyltransferase 0.25 BPHYT_RS14330 elongation factor P — —
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_00303 formate-dependent phosphoribosylglycinamide formyltransferase 0.26 H281DRAFT_04370 translation elongation factor P (EF-P) — —
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS24510 formate-dependent phosphoribosylglycinamide formyltransferase 0.26 QEN71_RS04655 elongation factor P — —
Paraburkholderia graminis OAS925 0.57 ABIE53_001433 phosphoribosylglycinamide formyltransferase 2 0.26 ABIE53_003027 elongation factor P — —
Methylophilus sp. DMC18 0.55 GFF1278 Formate-dependent phosphoribosylglycinamide formyltransferase 0.27 GFF374 Elongation factor P — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF363 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) 0.28 GFF3844 Translation elongation factor P — —
Acinetobacter radioresistens SK82 0.54 MPMX26_01866 Formate-dependent phosphoribosylglycinamide formyltransferase 0.68 MPMX26_01067 Elongation factor P — —
Variovorax sp. SCN45 0.53 GFF3604 Formate-dependent phosphoribosylglycinamide formyltransferase 0.27 GFF2861 Translation elongation factor P — —
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS22745 phosphoribosylglycinamide formyltransferase 0.25 RR42_RS14010 elongation factor P — —
Acidovorax sp. GW101-3H11 0.53 Ac3H11_4666 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) 0.28 Ac3H11_366 Translation elongation factor P — —
Variovorax sp. OAS795 0.52 ABID97_RS00805 formate-dependent phosphoribosylglycinamide formyltransferase 0.27 ABID97_RS10625 elongation factor P — —
Synechocystis sp000284455 PCC 6803 0.49 SGL_RS08220 phosphoribosylglycinamide formyltransferase 2 0.41 SGL_RS13730 elongation factor P — —
Synechococcus elongatus PCC 7942 0.49 Synpcc7942_0588 purT phosphoribosylglycinamide formyltransferase 2 0.41 Synpcc7942_2565 efp elongation factor P — —
Bacteroides ovatus ATCC 8483 0.44 BACOVA_02411 phosphoribosylglycinamide formyltransferase 2 0.31 BACOVA_03523 translation elongation factor P low > 94
Bacteroides thetaiotaomicron VPI-5482 0.44 BT0704 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) 0.31 BT3709 elongation factor P (NCBI ptt file) — —
Bifidobacterium breve UCC2003 0.44 BBR_RS13455 formate-dependent phosphoribosylglycinamide formyltransferase 0.38 BBR_RS13620 elongation factor P — —
Bacteroides stercoris CC31F 0.44 HMPREF1181_RS16250 formate-dependent phosphoribosylglycinamide formyltransferase 0.31 HMPREF1181_RS03235 elongation factor P low > 56
Phocaeicola dorei CL03T12C01 0.43 ABI39_RS14185 formate-dependent phosphoribosylglycinamide formyltransferase 0.30 ABI39_RS02760 elongation factor P — —
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS17920 formate-dependent phosphoribosylglycinamide formyltransferase 0.30 HMPREF1058_RS08535 elongation factor P low > 67
Mycobacterium tuberculosis H37Rv 0.29 Rv0389 Probable phosphoribosylglycinamide formyltransferase 2 PurT (GART 2) (gar transformylase 2) (5'-phosphoribosylglycinamide transformylase 2) (formate-dependent gar transformylase) 0.41 Rv2534c Probable elongation factor P Efp — —

Not shown: 22 genomes with orthologs for CSW01_06215 only; 28 genomes with orthologs for CSW01_13445 only