Conservation of cofitness between CSW01_08800 and CSW01_11345 in Vibrio cholerae E7946 ATCC 55056

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08800 paraquat-inducible protein B 1.0 CSW01_11345 uracil phosphoribosyltransferase 0.54 6
Shewanella sp. ANA-3 0.50 Shewana3_1920 hypothetical protein (RefSeq) 0.90 Shewana3_2544 upp uracil phosphoribosyltransferase (RefSeq) low > 73
Escherichia coli BW25113 0.44 b0951 pqiB paraquat-inducible protein B (NCBI) 0.89 b2498 upp uracil phosphoribosyltransferase (VIMSS) low > 76
Escherichia coli ECRC101 0.44 MCAODC_24655 pqiB intermembrane transport protein PqiB 0.89 MCAODC_12345 upp uracil phosphoribosyltransferase low > 87
Escherichia coli ECRC99 0.44 KEDOAH_22470 pqiB intermembrane transport protein PqiB 0.89 KEDOAH_06405 upp uracil phosphoribosyltransferase — —
Escherichia coli BL21 0.44 ECD_00955 paraquat-inducible, SoxRS-regulated MCE domain protein 0.89 ECD_02390 uracil phosphoribosyltransferase low > 61
Escherichia coli ECRC98 0.44 JDDGAC_08875 pqiB intermembrane transport protein PqiB 0.89 JDDGAC_25760 upp uracil phosphoribosyltransferase low > 87
Escherichia coli ECOR38 0.44 HEPCGN_23255 pqiB intermembrane transport protein PqiB 0.89 HEPCGN_20980 upp uracil phosphoribosyltransferase low > 88
Escherichia coli ECRC100 0.44 OKFHMN_05265 pqiB intermembrane transport protein PqiB 0.89 OKFHMN_21815 upp uracil phosphoribosyltransferase low > 79
Escherichia coli ECOR27 0.44 NOLOHH_21820 pqiB intermembrane transport protein PqiB 0.89 NOLOHH_13465 upp uracil phosphoribosyltransferase low > 76
Escherichia coli ECRC62 0.44 BNILDI_19985 pqiB intermembrane transport protein PqiB 0.89 BNILDI_12275 upp uracil phosphoribosyltransferase low > 75
Escherichia coli ECRC102 0.44 NIAGMN_02985 pqiB intermembrane transport protein PqiB 0.89 NIAGMN_19585 upp uracil phosphoribosyltransferase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_02715 Paraquat-inducible protein B 0.89 OHPLBJKB_01228 Uracil phosphoribosyltransferase low > 74
Escherichia fergusonii Becca 0.44 EFB2_03120 Intermembrane transport protein PqiB 0.89 EFB2_01400 Uracil phosphoribosyltransferase low > 86
Escherichia coli Nissle 1917 0.44 ECOLIN_RS04995 intermembrane transport protein PqiB 0.89 ECOLIN_RS14185 uracil phosphoribosyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF3242 Paraquat-inducible protein B 0.89 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 78
Enterobacter asburiae PDN3 0.43 EX28DRAFT_1992 Paraquat-inducible protein B 0.91 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) low > 76
Dickeya dadantii 3937 0.43 DDA3937_RS12825 intermembrane transport protein PqiB 0.88 DDA3937_RS06030 uracil phosphoribosyltransferase low > 74
Klebsiella pneumoniae MKP103 0.42 KDGMDA_18175 intermembrane transport protein PqiB 0.89 KDGMDA_27790 uracil phosphoribosyltransferase low > 95
Dickeya dianthicola 67-19 0.42 HGI48_RS12895 intermembrane transport protein PqiB 0.87 HGI48_RS06075 uracil phosphoribosyltransferase low > 71
Enterobacter sp. TBS_079 0.42 MPMX20_01602 Intermembrane transport protein PqiB 0.90 MPMX20_03352 Uracil phosphoribosyltransferase low > 85
Klebsiella michiganensis M5al 0.42 BWI76_RS09940 paraquat-inducible protein B 0.89 BWI76_RS20945 uracil phosphoribosyltransferase low > 92
Serratia liquefaciens MT49 0.42 IAI46_08835 intermembrane transport protein PqiB 0.90 IAI46_18880 uracil phosphoribosyltransferase low > 87
Dickeya dianthicola ME23 0.42 DZA65_RS13360 intermembrane transport protein PqiB 0.88 DZA65_RS06425 uracil phosphoribosyltransferase low > 75
Pectobacterium carotovorum WPP14 0.41 HER17_RS11975 intermembrane transport protein PqiB 0.89 HER17_RS15460 uracil phosphoribosyltransferase low > 75
Rahnella sp. WP5 0.41 EX31_RS18065 intermembrane transport protein PqiB 0.90 EX31_RS22700 uracil phosphoribosyltransferase low > 89
Pantoea agglomerans CFBP13505 P0401 0.41 PagCFBP13505_RS04655 intermembrane transport protein PqiB 0.90 PagCFBP13505_RS15075 uracil phosphoribosyltransferase low > 74
Pantoea sp. MT58 0.41 IAI47_12675 intermembrane transport protein PqiB 0.90 IAI47_05185 uracil phosphoribosyltransferase low > 76
Erwinia tracheiphila SCR3 0.40 LU632_RS09980 pqiB intermembrane transport protein PqiB 0.88 LU632_RS08280 upp uracil phosphoribosyltransferase low > 73
Erwinia tracheiphila HP pepo 2.2 0.40 IJEDHG_20495 pqiB intermembrane transport protein PqiB 0.88 IJEDHG_18370 upp uracil phosphoribosyltransferase low > 61
Erwinia amylovora T8 0.39 OLJFJH_15960 intermembrane transport protein PqiB 0.90 OLJFJH_10595 uracil phosphoribosyltransferase low > 58
Desulfovibrio vulgaris Hildenborough JW710 0.27 DVU3127 pqiB paraquat-inducible protein B (TIGR) 0.70 DVU1025 upp uracil phosphoribosyltransferase (TIGR) — —
Alteromonas macleodii MIT1002 0.27 MIT1002_01368 Paraquat-inducible protein B 0.71 MIT1002_02893 Uracil phosphoribosyltransferase low > 70
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS09195 MlaD family protein 0.47 QEN71_RS24390 uracil phosphoribosyltransferase low > 153
Azospirillum brasilense Sp245 0.26 AZOBR_RS21170 hypothetical protein 0.43 AZOBR_RS03150 uracil phosphoribosyltransferase low > 97
Paraburkholderia graminis OAS925 0.26 ABIE53_005791 paraquat-inducible protein B 0.46 ABIE53_001547 uracil phosphoribosyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_01874 paraquat-inducible protein B 0.45 H281DRAFT_04523 uracil phosphoribosyltransferase low > 103
Variovorax sp. OAS795 0.26 ABID97_RS15885 MlaD family protein 0.51 ABID97_RS16850 uracil phosphoribosyltransferase low > 91
Variovorax sp. SCN45 0.25 GFF1389 Paraquat-inducible protein B 0.49 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 127
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS17170 mammalian cell entry protein 0.47 HSERO_RS03500 uracil phosphoribosyltransferase low > 78
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS03885 mammalian cell entry protein 0.54 RR42_RS30815 uracil phosphoribosyltransferase low > 128
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS02790 MlaD family protein 0.72 LRK54_RS03170 uracil phosphoribosyltransferase low > 59
Rhodanobacter denitrificans MT42 0.24 LRK55_RS02545 MlaD family protein 0.72 LRK55_RS02920 uracil phosphoribosyltransferase low > 63
Rhodanobacter sp000427505 FW510-R12 0.24 LRK53_RS07160 MlaD family protein 0.72 LRK53_RS06810 uracil phosphoribosyltransferase low > 59
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_09825 Mammalian cell entry protein 0.70 OKGIIK_10040 upp uracil phosphoribosyltransferase low > 53
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS09120 MlaD family protein 0.72 ABZR86_RS09615 uracil phosphoribosyltransferase low > 74
Pseudomonas sp. DMC3 0.23 GFF2730 Intermembrane transport protein PqiB 0.70 GFF4471 Uracil phosphoribosyltransferase low > 89
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_4821 Paraquat-inducible protein B 0.71 Pf1N1B4_2934 Uracil phosphoribosyltransferase (EC 2.4.2.9) — —
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_3045 PqiB family protein 0.72 Psyr_0969 uracil phosphoribosyltransferase low > 86
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS03460 mammalian cell entry protein 0.46 BPHYT_RS06415 uracil phosphoribosyltransferase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_3045 PqiB family protein 0.72 Psyr_0969 uracil phosphoribosyltransferase low > 86
Acinetobacter baumannii LAC-4 0.23 RR41_RS06540 MlaD family protein 0.67 RR41_RS15445 uracil phosphoribosyltransferase low > 55
Pseudomonas orientalis W4I3 0.23 QF045_RS07535 MlaD family protein 0.71 QF045_RS07420 uracil phosphoribosyltransferase low > 93
Pseudomonas fluorescens SBW25 0.23 PFLU_RS04610 MCE family protein 0.71 PFLU_RS04485 uracil phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS04610 MCE family protein 0.71 PFLU_RS04485 uracil phosphoribosyltransferase low > 109
Pseudomonas sp. BP01 0.23 JOY50_RS12060 intermembrane transport protein PqiB 0.70 JOY50_RS19525 upp uracil phosphoribosyltransferase low > 84
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS12320 MCE family protein 0.48 RALBFv3_RS03530 uracil phosphoribosyltransferase low > 76
Dechlorosoma suillum PS 0.23 Dsui_2289 qaraquat-inducible protein B 0.74 Dsui_2333 uracil phosphoribosyltransferase low > 51
Ralstonia solanacearum UW163 0.23 UW163_RS01285 MCE family protein 0.48 UW163_RS10140 uracil phosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_3226 Paraquat-inducible protein B 0.71 PfGW456L13_1597 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 87
Ralstonia solanacearum PSI07 0.22 RPSI07_RS20990 MCE family protein 0.48 RPSI07_RS13695 uracil phosphoribosyltransferase low > 81
Azospirillum sp. SherDot2 0.22 MPMX19_05102 Intermembrane transport protein PqiB 0.45 MPMX19_02205 Uracil phosphoribosyltransferase low > 112
Pseudomonas putida KT2440 0.22 PP_2577 putative paraquat-inducible protein B (pqiB like) 0.70 PP_0746 Uracil phosphoribosyltransferase low > 96
Ralstonia solanacearum GMI1000 0.22 RS_RS03005 MCE family protein 0.48 RS_RS10980 uracil phosphoribosyltransferase low > 80
Pseudomonas sp. SVBP6 0.22 COO64_RS20940 intermembrane transport protein PqiB 0.72 COO64_RS03295 upp uracil phosphoribosyltransferase low > 93
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS08260 intermembrane transport protein PqiB 0.46 ABZR87_RS15395 uracil phosphoribosyltransferase low > 80
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2141 Paraquat-inducible protein B 0.70 Pf6N2E2_5235 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 103
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_29375 mammalian cell entry protein 0.72 AO353_14855 uracil phosphoribosyltransferase low > 101
Pseudomonas sp. RS175 0.21 PFR28_01295 Intermembrane transport protein PqiB 0.70 PFR28_03641 Uracil phosphoribosyltransferase low > 88
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_01345 mammalian cell entry protein 0.70 AO356_16565 uracil phosphoribosyltransferase low > 104
Castellaniella sp019104865 MT123 0.20 ABCV34_RS05295 MlaD family protein 0.68 ABCV34_RS15380 uracil phosphoribosyltransferase low > 48

Not shown: 2 genomes with orthologs for CSW01_08800 only; 45 genomes with orthologs for CSW01_11345 only