Conservation of cofitness between CSW01_03150 and CSW01_11235 in Vibrio cholerae E7946 ATCC 55056

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03150 tRNA glutamyl-Q(34) synthetase GluQRS 1.0 CSW01_11235 chemotaxis protein CheV 0.66 8
Pectobacterium carotovorum WPP14 0.53 HER17_RS05575 tRNA glutamyl-Q(34) synthetase GluQRS 0.31 HER17_RS13880 chemotaxis protein low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS16055 tRNA glutamyl-Q(34) synthetase GluQRS 0.28 HGI48_RS07815 chemotaxis protein CheW low > 71
Dickeya dianthicola ME23 0.52 DZA65_RS17140 tRNA glutamyl-Q(34) synthetase GluQRS 0.28 DZA65_RS08410 chemotaxis protein CheV low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF88 glutamyl-Q-tRNA synthetase 0.29 GFF1876 Chemotaxis protein CheV (EC 2.7.3.-) low > 78
Dickeya dadantii 3937 0.52 DDA3937_RS15940 tRNA glutamyl-Q(34) synthetase GluQRS 0.29 DDA3937_RS08090 chemotaxis protein CheV low > 74
Rahnella sp. WP5 0.50 EX31_RS03255 tRNA glutamyl-Q(34) synthetase GluQRS 0.30 EX31_RS11205 chemotaxis protein CheV low > 89
Enterobacter sp. TBS_079 0.50 MPMX20_00830 Glutamyl-Q tRNA(Asp) synthetase 0.31 MPMX20_03205 Chemotaxis protein CheV low > 85
Shewanella loihica PV-4 0.50 Shew_3130 glutamate--tRNA ligase (RefSeq) 0.64 Shew_1343 response regulator receiver modulated CheW protein (RefSeq) low > 60
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3733 glutamyl-queuosine tRNA(Asp) synthetase 0.31 EX28DRAFT_0335 Chemotaxis signal transduction protein low > 76
Erwinia amylovora T8 0.48 OLJFJH_00770 tRNA glutamyl-Q(34) synthetase GluQRS 0.28 OLJFJH_15340 chemotaxis protein CheV low > 58
Shewanella amazonensis SB2B 0.48 Sama_0779 glutamyl-tRNA synthetase domain-containing protein (RefSeq) 0.62 Sama_2320 chemotaxis protein CheV (RefSeq) 0.29 17
Pantoea agglomerans CFBP13505 P0401 0.47 PagCFBP13505_RS13360 tRNA glutamyl-Q(34) synthetase GluQRS 0.30 PagCFBP13505_RS10095 chemotaxis protein CheV low > 74
Shewanella sp. ANA-3 0.47 Shewana3_3405 glutamyl-tRNA synthetase, class Ic (RefSeq) 0.63 Shewana3_1319 response regulator receiver modulated CheW protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.47 SO0873 glutamyl-tRNA synthetase domain protein (NCBI ptt file) 0.63 SO3252 cheV-3 chemotaxis protein CheV (NCBI ptt file) low > 76
Erwinia tracheiphila SCR3 0.47 LU632_RS20085 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.27 LU632_RS16610 chemotaxis protein low > 73
Erwinia tracheiphila HP pepo 2.2 0.47 IJEDHG_15055 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.27 IJEDHG_26420 chemotaxis protein CheV low > 61
Alteromonas macleodii MIT1002 0.44 MIT1002_03691 Glutamyl-Q tRNA(Asp) synthetase 0.64 MIT1002_01037 Chemotaxis protein CheV low > 70
Pseudomonas lactucae CFBP13502 0.42 GEMAOFIL_04927 Glutamyl-Q tRNA(Asp) synthetase 0.57 GEMAOFIL_04459 Chemotaxis protein CheV low > 96
Pseudomonas sp. DMC3 0.41 GFF4033 Glutamyl-Q tRNA(Asp) synthetase 0.57 GFF4852 Chemotaxis protein CheV low > 89
Pseudomonas aeruginosa PA14 0.41 IKLFDK_29995 tRNA glutamyl-Q(34) synthetase GluQRS 0.58 IKLFDK_17170 chemotaxis protein low > 98
Pseudomonas aeruginosa PUPa3 0.41 DQ20_RS52675 gluQRS;go_function=aminoacyl-tRNA tRNA glutamyl-Q(34) synthetase GluQRS 0.58 DQ20_RS40895 chemotaxis protein CheV 0.26 84
Pseudomonas aeruginosa MRSN321 0.41 DY961_RS09355 gluQRS;go_function=aminoacyl-tRNA tRNA glutamyl-Q(34) synthetase GluQRS 0.58 DY961_RS00115 chemotaxis protein CheV low > 100
Pseudomonas sp. S08-1 0.40 OH686_17275 glutamyl-queuosine tRNA(Asp) synthetase 0.61 OH686_02985 Chemotaxis protein CheV low > 80
Pseudomonas simiae WCS417 0.40 PS417_23880 glutamyl-Q tRNA(Asp) ligase 0.57 PS417_21580 chemotaxis protein CheW low > 88
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS25720 tRNA glutamyl-Q(34) synthetase GluQRS 0.57 PFLU_RS23190 chemotaxis protein CheV low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS25720 tRNA glutamyl-Q(34) synthetase GluQRS 0.57 PFLU_RS23190 chemotaxis protein CheV low > 109
Pseudomonas segetis P6 0.40 MPMX49_01256 Glutamyl-Q tRNA(Asp) synthetase 0.56 MPMX49_03170 Chemotaxis protein CheV low > 75
Pseudomonas orientalis W4I3 0.39 QF045_RS26140 tRNA glutamyl-Q(34) synthetase GluQRS 0.56 QF045_RS23665 chemotaxis protein CheV low > 93
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_5159 glutamyl-Q-tRNA synthetase 0.56 Pf6N2E2_5692 Chemotaxis protein CheV (EC 2.7.3.-) low > 103
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2861 glutamyl-Q-tRNA synthetase 0.57 Pf1N1B4_3470 Chemotaxis protein CheV (EC 2.7.3.-) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_0834 Glutamyl-tRNA synthetase, class Ic 0.59 Psyr_3486 Response regulator receiver:CheW-like protein low > 86
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_16090 glutamyl-Q tRNA(Asp) ligase 0.56 AO356_18905 chemotaxis protein CheW low > 104
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_0834 Glutamyl-tRNA synthetase, class Ic 0.59 Psyr_3486 Response regulator receiver:CheW-like protein low > 86
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_1527 glutamyl-Q-tRNA synthetase 0.57 PfGW456L13_1999 Chemotaxis protein CheV (EC 2.7.3.-) low > 87
Pseudomonas sp. RS175 0.39 PFR28_03715 Glutamyl-Q tRNA(Asp) synthetase 0.56 PFR28_03256 Chemotaxis protein CheV low > 88
Pseudomonas stutzeri RCH2 0.39 Psest_1002 glutamyl-queuosine tRNA(Asp) synthetase 0.55 Psest_2970 Chemotaxis signal transduction protein low > 67
Pseudomonas sp. SVBP6 0.38 COO64_RS15075 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.57 COO64_RS21410 chemotaxis protein CheV low > 93
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_14415 glutamyl-Q tRNA(Asp) ligase 0.56 AO353_02870 chemotaxis protein CheW low > 101
Pseudomonas putida KT2440 0.37 PP_4694 Glutamyl-Q tRNA(Asp) synthetase 0.56 PP_4393 putative chemotaxis protein low > 96
Dechlorosoma suillum PS 0.37 Dsui_1040 glutamyl-queuosine tRNA(Asp) synthetase 0.32 Dsui_1717 chemotaxis signal transduction protein low > 51
Pseudomonas sp. BP01 0.37 JOY50_RS27690 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.56 JOY50_RS00805 chemotaxis protein CheV low > 84
Marinobacter adhaerens HP15 0.36 HP15_331 glutamyl-Q tRNA(Asp) synthetase 0.54 HP15_1547 response regulator receiver modulated CheW protein low > 73
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.2261.1 glutamyl-Q-tRNA synthetase 0.46 Xcc-8004.2777.1 Chemotaxis protein CheV (EC 2.7.3.-) low > 74
Lysobacter sp. OAE881 0.34 ABIE51_RS13520 tRNA glutamyl-Q(34) synthetase GluQRS 0.43 ABIE51_RS16665 chemotaxis protein low > 62
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS06160 glutamyl-Q tRNA(Asp) ligase 0.31 BPHYT_RS07045 chemotaxis protein CheV low > 109
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_03640 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.41 OKGIIK_02645 Chemotaxis protein low > 53
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_00309 glutamyl-Q tRNA(Asp) synthetase 0.32 H281DRAFT_04914 CheW protein — —
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS24480 tRNA glutamyl-Q(34) synthetase GluQRS 0.32 QEN71_RS38230 chemotaxis protein low > 153
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS14820 tRNA glutamyl-Q(34) synthetase GluQRS 0.39 LRK54_RS13400 chemotaxis protein low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS14535 tRNA glutamyl-Q(34) synthetase GluQRS 0.39 LRK55_RS13140 chemotaxis protein low > 63
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS17850 glutamyl-Q tRNA(Asp) ligase 0.31 HSERO_RS09765 chemotaxis protein CheV low > 78
Rhodanobacter sp000427505 FW510-R12 0.32 LRK53_RS13775 tRNA glutamyl-Q(34) synthetase GluQRS 0.39 LRK53_RS15180 chemotaxis protein low > 59
Castellaniella sp019104865 MT123 0.32 ABCV34_RS12295 glutamyl-Q tRNA(Asp) synthetase 0.29 ABCV34_RS04825 chemotaxis protein low > 48
Paraburkholderia graminis OAS925 0.32 ABIE53_001439 glutamyl-Q tRNA(Asp) synthetase 0.32 ABIE53_001701 two-component system chemotaxis response regulator CheV low > 113
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS15535 tRNA glutamyl-Q(34) synthetase GluQRS 0.32 ABZR87_RS21330 chemotaxis protein low > 80
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS14805 glutamyl-Q tRNA(Asp) ligase 0.31 RR42_RS27090 chemotaxis protein CheV low > 128

Not shown: 32 genomes with orthologs for CSW01_03150 only; 0 genomes with orthologs for CSW01_11235 only