| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_12260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 1.0 | CSW01_11225 | | flagellar basal body rod protein FlgB | 0.49 | 15 |
| Escherichia coli ECOR38 | 0.62 | HEPCGN_08505 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | HEPCGN_23815 | flgB | flagellar basal body rod protein FlgB | low | > 88 |
| Escherichia coli Nissle 1917 | 0.62 | ECOLIN_RS00590 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | ECOLIN_RS06215 | | flagellar basal body rod protein FlgB | low | > 55 |
| Escherichia fergusonii Becca | 0.62 | EFB2_03939 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | EFB2_02901 | | Flagellar basal body rod protein FlgB | low | > 86 |
| Enterobacter sp. TBS_079 | 0.62 | MPMX20_00801 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.37 | MPMX20_01752 | | Flagellar basal body rod protein FlgB | 0.23 | 53 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.61 | GFF129 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | 0.36 | GFF3354 | | Flagellar basal-body rod protein FlgB | low | > 78 |
| Enterobacter asburiae PDN3 | 0.61 | EX28DRAFT_3703 | | N-acetylmuramoyl-L-alanine amidase | 0.37 | EX28DRAFT_1859 | | flagellar basal-body rod protein FlgB | — | — |
| Escherichia coli ECRC99 | 0.61 | KEDOAH_17630 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | KEDOAH_24080 | flgB | flagellar basal body rod protein FlgB | — | — |
| Escherichia coli ECRC100 | 0.61 | OKFHMN_10525 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | OKFHMN_03675 | flgB | flagellar basal body rod protein FlgB | low | > 79 |
| Escherichia coli ECRC101 | 0.61 | MCAODC_01040 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | MCAODC_23035 | flgB | flagellar basal body rod protein FlgB | low | > 87 |
| Escherichia coli ECRC98 | 0.61 | JDDGAC_14120 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | JDDGAC_07335 | flgB | flagellar basal body rod protein FlgB | — | — |
| Escherichia coli ECRC102 | 0.61 | NIAGMN_08375 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | NIAGMN_24155 | flgB | flagellar basal body rod protein FlgB | — | — |
| Erwinia amylovora T8 | 0.61 | OLJFJH_01045 | | 1 6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.37 | OLJFJH_15625 | | flagellar basal body rod protein FlgB | low | > 58 |
| Escherichia coli ECRC62 | 0.61 | BNILDI_08740 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | BNILDI_19365 | flgB | flagellar basal body rod protein FlgB | low | > 75 |
| Escherichia coli ECOR27 | 0.61 | NOLOHH_02870 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | NOLOHH_21205 | flgB | flagellar basal body rod protein FlgB | low | > 76 |
| Escherichia coli BL21 | 0.61 | ECD_00109 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase | 0.34 | ECD_01069 | | flagellar component of cell-proximal portion of basal-body rod | low | > 61 |
| Escherichia coli BW25113 | 0.61 | b0110 | ampD | N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) | 0.34 | b1073 | flgB | flagellar basal-body rod protein B (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.61 | OHPLBJKB_03551 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | OHPLBJKB_02592 | | Flagellar basal body rod protein FlgB | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.61 | MIT1002_03006 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.48 | MIT1002_01039 | | Putative proximal rod protein | — | — |
| Rahnella sp. WP5 | 0.59 | EX31_RS03510 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.39 | EX31_RS11315 | | flagellar basal body rod protein FlgB | low | > 89 |
| Herbaspirillum seropedicae SmR1 | 0.59 | HSERO_RS01880 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.29 | HSERO_RS10180 | | flagellar biosynthesis protein FlgB | low | > 78 |
| Pantoea sp. MT58 | 0.58 | IAI47_15840 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.35 | IAI47_12165 | | flagellar basal body rod protein FlgB | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.58 | PagCFBP13505_RS13160 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.35 | PagCFBP13505_RS05170 | | flagellar basal body rod protein FlgB | low | > 74 |
| Serratia liquefaciens MT49 | 0.57 | IAI46_03535 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.35 | IAI46_15960 | | flagellar basal body rod protein FlgB | low | > 87 |
| Pseudomonas segetis P6 | 0.56 | MPMX49_03899 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.42 | MPMX49_03167 | | Flagellar basal body rod protein FlgB | low | > 75 |
| Dickeya dianthicola ME23 | 0.56 | DZA65_RS19020 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.40 | DZA65_RS14010 | | flagellar basal body rod protein FlgB | low | > 75 |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS17875 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.40 | HGI48_RS13525 | | flagellar basal body rod protein FlgB | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.56 | HER17_RS03260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.36 | HER17_RS08165 | | flagellar basal body rod protein FlgB | low | > 75 |
| Pseudomonas sp. SVBP6 | 0.56 | COO64_RS03530 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.43 | COO64_RS21400 | flgB | flagellar basal body rod protein FlgB | — | — |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS17945 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.40 | DDA3937_RS13480 | | flagellar basal body rod protein FlgB | low | > 74 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_0423 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | 0.47 | Shewana3_1321 | flgB | flagellar basal body rod protein FlgB (RefSeq) | — | — |
| Pseudomonas aeruginosa PA14 | 0.55 | IKLFDK_01470 | | beta-lactamase expression regulator AmpD | 0.41 | IKLFDK_04945 | | flagellar basal body rod protein FlgB | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.55 | DQ20_RS56325 | ampD;go_function=N-acetylmuramoyl-L-alanine | 1 6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.41 | DQ20_RS45720 | flgB;go_component=bacterial-type | flagellar basal body rod protein FlgB | low | > 101 |
| Shewanella oneidensis MR-1 | 0.53 | SO0421 | ampD | AmpD protein (NCBI ptt file) | 0.48 | SO3250 | flgB | flagellar basal-body rod protein FlgB (NCBI ptt file) | low | > 76 |
| Pseudomonas lactucae CFBP13502 | 0.53 | GEMAOFIL_00991 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.44 | GEMAOFIL_04457 | | Flagellar basal body rod protein FlgB | low | > 96 |
| Pseudomonas simiae WCS417 | 0.53 | PS417_03935 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.44 | PS417_21570 | | flagellar basal body rod protein FlgB | low | > 88 |
| Marinobacter adhaerens HP15 | 0.53 | HP15_1307 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.48 | HP15_1467 | | fFlagellar basal-body rod protein FlgB | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.53 | Pf1N1B4_1151 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | 0.43 | Pf1N1B4_3472 | | Flagellar basal-body rod protein FlgB | — | — |
| Pseudomonas sp. RS175 | 0.53 | PFR28_00100 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.43 | PFR28_03254 | | Flagellar basal body rod protein FlgB | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.53 | PFLU_RS03980 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.44 | PFLU_RS23180 | | flagellar basal body rod protein FlgB | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.53 | PFLU_RS03980 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.44 | PFLU_RS23180 | | flagellar basal body rod protein FlgB | low | > 109 |
| Pseudomonas sp. S08-1 | 0.53 | OH686_16530 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | 0.34 | OH686_02975 | | flagellar basal-body rod protein FlgB | low | > 80 |
| Shewanella loihica PV-4 | 0.53 | Shew_3434 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | 0.56 | Shew_1345 | flgB | flagellar basal body rod protein FlgB (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.53 | Sama_0372 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | 0.49 | Sama_2318 | flgB | flagellar basal body rod protein FlgB (RefSeq) | low | > 62 |
| Pseudomonas sp. DMC3 | 0.53 | GFF4998 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.44 | GFF4850 | | Flagellar basal body rod protein FlgB | low | > 89 |
| Pseudomonas stutzeri RCH2 | 0.52 | Psest_0725 | | Negative regulator of beta-lactamase expression | 0.40 | Psest_2968 | | flagellar basal-body rod protein FlgB | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.52 | PfGW456L13_5081 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | 0.44 | PfGW456L13_2001 | | Flagellar basal-body rod protein FlgB | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.52 | Psyr_0817 | | N-acetylmuramoyl-L-alanine amidase, family 2 | 0.40 | Psyr_3481 | | Flagellar basal-body rod protein FlgB | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.52 | Pf6N2E2_3344 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | 0.42 | Pf6N2E2_5694 | | Flagellar basal-body rod protein FlgB | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.52 | AO356_07360 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.42 | AO356_18915 | | flagellar biosynthesis protein FlgB | 0.51 | 24 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.52 | Psyr_0817 | | N-acetylmuramoyl-L-alanine amidase, family 2 | 0.40 | Psyr_3481 | | Flagellar basal-body rod protein FlgB | low | > 86 |
| Pseudomonas putida KT2440 | 0.51 | PP_0789 | | N-acetyl-anhydromuramyl-L-alanine-amidase | 0.44 | PP_4391 | | flagellar basal-body rod protein FlgB | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_05510 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.45 | AO353_02860 | | flagellar biosynthesis protein FlgB | 0.41 | 28 |
| Pseudomonas sp. BP01 | 0.51 | JOY50_RS19335 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.42 | JOY50_RS00795 | flgB | flagellar basal body rod protein FlgB | low | > 84 |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS09025 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.35 | ABCV34_RS05770 | | flagellar basal body rod protein FlgB | low | > 48 |
| Burkholderia phytofirmans PsJN | 0.48 | BPHYT_RS17065 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.27 | BPHYT_RS18895 | | flagellar basal body rod protein FlgB | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.48 | RR42_RS17865 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.30 | RR42_RS35725 | | flagellar biosynthesis protein FlgB | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.47 | H281DRAFT_06273 | | AmpD protein | 0.27 | H281DRAFT_05762 | | flagellar basal-body rod protein FlgB | low | > 103 |
| Dechlorosoma suillum PS | 0.47 | Dsui_0134 | | negative regulator of beta-lactamase expression | 0.38 | Dsui_1732 | | flagellar basal-body rod protein FlgB | low | > 51 |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS27225 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.24 | QEN71_RS28920 | | flagellar basal body rod protein FlgB | low | > 153 |
| Methylophilus sp. DMC18 | 0.47 | GFF2302 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | GFF563 | | Flagellar basal body rod protein FlgB | — | — |
| Paraburkholderia graminis OAS925 | 0.47 | ABIE53_003579 | | AmpD protein | 0.26 | ABIE53_000102 | | flagellar basal-body rod protein FlgB | low | > 113 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF594 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | 0.32 | GFF4072 | | Flagellar basal-body rod protein FlgB | — | — |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS14030 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.31 | RS_RS18795 | | flagellar basal body rod protein FlgB | — | — |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS11160 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.31 | RPSI07_RS01390 | | flagellar basal body rod protein FlgB | — | — |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS07545 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.30 | UW163_RS17445 | | flagellar basal body rod protein FlgB | — | — |
| Variovorax sp. SCN45 | 0.45 | GFF4433 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | 0.31 | GFF5715 | | Flagellar basal-body rod protein FlgB | low | > 127 |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS06080 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.30 | RALBFv3_RS21740 | | flagellar basal body rod protein FlgB | — | — |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS01745 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.30 | ABZR87_RS22290 | | flagellar basal body rod protein FlgB | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.37 | Ac3H11_4020 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | 0.27 | Ac3H11_1377 | | Flagellar basal-body rod protein FlgB | — | — |
Not shown: 6 genomes with orthologs for CSW01_12260 only; 12 genomes with orthologs for CSW01_11225 only