| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_10260 | | thiol:disulfide interchange protein DsbE | 1.0 | CSW01_10265 | | c-type cytochrome biogenesis protein CcmF | 0.83 | 15 |
| Escherichia coli ECRC99 | 0.69 | KEDOAH_04875 | dsbE | thiol:disulfide interchange protein DsbE | 0.60 | KEDOAH_04880 | ccmF | cytochrome c-type biogenesis heme lyase CcmF | — | — |
| Escherichia coli BW25113 | 0.69 | b2195 | ccmG | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | 0.60 | b2196 | ccmF | heme lyase, CcmF subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.69 | NIAGMN_21075 | dsbE | thiol:disulfide interchange protein DsbE | 0.60 | NIAGMN_21070 | ccmF | cytochrome c-type biogenesis heme lyase CcmF | low | > 80 |
| Escherichia coli ECRC100 | 0.69 | OKFHMN_23310 | dsbE | thiol:disulfide interchange protein DsbE | 0.60 | OKFHMN_23305 | ccmF | cytochrome c-type biogenesis heme lyase CcmF | low | > 79 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.69 | OHPLBJKB_01516 | | Thiol:disulfide interchange protein DsbE | 0.60 | OHPLBJKB_01515 | | Cytochrome c-type biogenesis protein CcmF | low | > 74 |
| Escherichia coli ECRC62 | 0.69 | BNILDI_13805 | dsbE | thiol:disulfide interchange protein DsbE | 0.60 | BNILDI_13800 | ccmF | cytochrome c-type biogenesis heme lyase CcmF | low | > 75 |
| Escherichia coli ECOR27 | 0.69 | NOLOHH_14885 | dsbE | thiol:disulfide interchange protein DsbE | 0.60 | NOLOHH_14880 | ccmF | cytochrome c-type biogenesis heme lyase CcmF | low | > 75 |
| Escherichia coli ECRC101 | 0.69 | MCAODC_14360 | dsbE | thiol:disulfide interchange protein DsbE | 0.60 | MCAODC_14355 | ccmF | cytochrome c-type biogenesis heme lyase CcmF | low | > 87 |
| Escherichia fergusonii Becca | 0.69 | EFB2_01661 | | Thiol:disulfide interchange protein DsbE | 0.60 | EFB2_01660 | | Cytochrome c-type biogenesis protein CcmF | low | > 86 |
| Escherichia coli ECRC98 | 0.69 | JDDGAC_27270 | dsbE | thiol:disulfide interchange protein DsbE | 0.60 | JDDGAC_27265 | ccmF | cytochrome c-type biogenesis heme lyase CcmF | low | > 87 |
| Escherichia coli BL21 | 0.69 | ECD_02122 | | periplasmic thioredoxin of cytochrome c-type biogenesis | 0.60 | ECD_02123 | | heme lyase, CcmF subunit | low | > 61 |
| Escherichia coli Nissle 1917 | 0.69 | ECOLIN_RS12830 | | thiol:disulfide interchange protein DsbE | 0.60 | ECOLIN_RS12835 | | cytochrome c-type biogenesis heme lyase CcmF | — | — |
| Escherichia coli ECOR38 | 0.68 | HEPCGN_22575 | dsbE | thiol:disulfide interchange protein DsbE | 0.60 | HEPCGN_22570 | ccmF | cytochrome c-type biogenesis heme lyase CcmF | low | > 88 |
| Pantoea sp. MT58 | 0.67 | IAI47_06095 | | DsbE family thiol:disulfide interchange protein | 0.65 | IAI47_06090 | | heme lyase CcmF/NrfE family subunit | 0.54 | 1 |
| Pantoea agglomerans CFBP13505 P0401 | 0.66 | PagCFBP13516_RS06285 | | DsbE family thiol:disulfide interchange protein | 0.65 | PagCFBP13516_RS06280 | | heme lyase CcmF/NrfE family subunit | low | > 80 |
| Klebsiella pneumoniae MRSN742743 | 0.65 | GJGHJB_02105 | trxA | Thiol:disulfide interchange protein DsbE | 0.62 | GJGHJB_02104 | ccmE | cytochrome c maturation protein CcmE | low | > 83 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_18080 | | DsbE family thiol:disulfide interchange protein | 0.65 | IAI46_18085 | | heme lyase CcmF/NrfE family subunit | low | > 87 |
| Klebsiella pneumoniae MKP103 | 0.65 | KDGMDA_23840 | | DsbE family thiol:disulfide interchange protein | 0.62 | KDGMDA_23845 | | cytochrome c maturation protein CcmE | low | > 94 |
| Erwinia amylovora T8 | 0.63 | OLJFJH_11105 | | DsbE family thiol:disulfide interchange protein | 0.63 | OLJFJH_11100 | | heme lyase NrfEFG subunit NrfE | low | > 58 |
| Pectobacterium carotovorum WPP14 | 0.63 | HER17_RS09060 | | DsbE family thiol:disulfide interchange protein | 0.63 | HER17_RS09055 | | heme lyase CcmF/NrfE family subunit | low | > 75 |
| Rahnella sp. WP5 | 0.62 | EX31_RS19740 | | DsbE family thiol:disulfide interchange protein | 0.67 | EX31_RS19745 | | heme lyase CcmF/NrfE family subunit | low | > 89 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.61 | GFF4876 | | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase | 0.58 | GFF4877 | | Cytochrome c heme lyase subunit CcmF | — | — |
| Marinobacter adhaerens HP15 | 0.49 | HP15_2280 | | periplasmic protein thiol: disulfide oxidoreductase DsbE | 0.51 | HP15_2281 | | cytochrome c assembly protein | — | — |
| Pseudomonas aeruginosa PA14 | 0.49 | IKLFDK_07045 | | thiol:disulfide interchange protein DsbE | 0.49 | IKLFDK_07040 | | Cytochrome c-type biogenesis protein CcmF | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.49 | PFGADD_03746 | dsbE | thiol:disulfide interchange protein DsbE | 0.49 | PFGADD_03747 | ccmF | Cytochrome c-type biogenesis protein CcmF | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.48 | NPBIFN_03787 | dsbE | thiol:disulfide interchange protein DsbE | 0.49 | NPBIFN_03788 | ccmF | Cytochrome c-type biogenesis protein CcmF | — | — |
| Pseudomonas putida KT2440 | 0.48 | PP_4321 | | holocytochrome c synthetase subunit | 0.50 | PP_4322 | | holocytochrome c synthetase | — | — |
| Pseudomonas sp. SVBP6 | 0.48 | COO64_RS25720 | | DsbE family thiol:disulfide interchange protein | 0.50 | COO64_RS25715 | | heme lyase CcmF/NrfE family subunit | — | — |
| Pseudomonas sp. BP01 | 0.47 | JOY50_RS00475 | | DsbE family thiol:disulfide interchange protein | 0.49 | JOY50_RS00480 | | heme lyase CcmF/NrfE family subunit | — | — |
| Shewanella amazonensis SB2B | 0.47 | Sama_0249 | | thiol:disulfide interchange protein DsbE (RefSeq) | 0.51 | Sama_0248 | | cytochrome c-type biogenesis protein CcmF (RefSeq) | 0.96 | 1 |
| Shewanella oneidensis MR-1 | 0.46 | SO0267 | dsbE | thiol:disulfide interchange protein DsbE (NCBI ptt file) | 0.49 | SO0266 | ccmF-1 | cytochrome c-type biogenesis protein CcmF (NCBI ptt file) | 0.91 | 1 |
| Shewanella loihica PV-4 | 0.45 | Shew_0194 | | periplasmic protein thiol--disulphide oxidoreductase DsbE (RefSeq) | 0.51 | Shew_0193 | | cytochrome c-type biogenesis protein CcmF (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.45 | Shewana3_0235 | | periplasmic protein thiol--disulphide oxidoreductase DsbE (RefSeq) | 0.50 | Shewana3_0234 | | cytochrome c-type biogenesis protein CcmF (RefSeq) | 0.97 | 1 |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_1760 | | periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily | 0.51 | Psest_1759 | | c-type cytochrome biogenesis protein CcmF | — | — |
| Kangiella aquimarina DSM 16071 | 0.44 | B158DRAFT_1329 | | periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily | 0.54 | B158DRAFT_1328 | | c-type cytochrome biogenesis protein CcmF | 0.98 | 1 |
| Pseudomonas segetis P6 | 0.43 | ACVTMO_RS15390 | | DsbE family thiol:disulfide interchange protein | 0.55 | ACVTMO_RS15395 | | heme lyase CcmF/NrfE family subunit | — | — |
| Pseudomonas sp. S08-1 | 0.42 | OH686_02630 | | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase | 0.51 | OH686_02635 | | cytochrome c-type biogenesis protein CcmF | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_3387 | | Periplasmic protein thiol:disulfide oxidoreductase DsbE | 0.52 | Psyr_3388 | | Cytochrome c-type biogenesis protein CcmF | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_3387 | | Periplasmic protein thiol:disulfide oxidoreductase DsbE | 0.52 | Psyr_3388 | | Cytochrome c-type biogenesis protein CcmF | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_18880 | | thiol:disulfide interchange protein | 0.51 | AO353_18875 | | cytochrome C biogenesis protein CcmF | — | — |
| Pseudomonas orientalis W4I3 | 0.41 | QF045_RS11435 | | DsbE family thiol:disulfide interchange protein | 0.51 | QF045_RS11430 | | heme lyase CcmF/NrfE family subunit | — | — |
| Pseudomonas protegens RBAN4 | 0.41 | FABNJH_08755 | | Thioredoxin domain-containing protein | 0.52 | FABNJH_08750 | ccmE | cytochrome c maturation protein CcmE | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_2554 | | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase | 0.51 | Pf6N2E2_2555 | | Cytochrome c heme lyase subunit CcmF | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_03630 | | thiol:disulfide interchange protein | 0.52 | AO356_03635 | | cytochrome C biogenesis protein CcmF | — | — |
| Pseudomonas lactucae CFBP13502 | 0.40 | GEMAOFIL_01876 | | Thiol:disulfide interchange protein DsbE | 0.51 | GEMAOFIL_01875 | | Cytochrome c-type biogenesis protein CcmF | — | — |
| Pseudomonas sp. DMC3 | 0.40 | GFF2491 | | Thiol:disulfide interchange protein DsbE | 0.51 | GFF2490 | | Cytochrome c-type biogenesis protein CcmF | — | — |
| Pseudomonas simiae WCS417 | 0.40 | PS417_08720 | | thiol:disulfide interchange protein | 0.52 | PS417_08715 | | cytochrome C biogenesis protein CcmF | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.40 | PfGW456L13_4310 | | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase | 0.53 | PfGW456L13_4311 | | Cytochrome c heme lyase subunit CcmF | — | — |
| Pseudomonas fluorescens SBW25 | 0.40 | PFLU_RS08675 | | DsbE family thiol:disulfide interchange protein | 0.51 | PFLU_RS08670 | | heme lyase CcmF/NrfE family subunit | 0.78 | 1 |
| Pseudomonas fluorescens SBW25-INTG | 0.40 | PFLU_RS08675 | | DsbE family thiol:disulfide interchange protein | 0.51 | PFLU_RS08670 | | heme lyase CcmF/NrfE family subunit | 0.91 | 1 |
| Pseudomonas fluorescens FW300-N1B4 | 0.40 | Pf1N1B4_3645 | | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase | 0.51 | Pf1N1B4_3644 | | Cytochrome c heme lyase subunit CcmF | — | — |
| Pseudomonas sp. RS175 | 0.38 | PFR28_00871 | | Thiol:disulfide interchange protein DsbE | 0.52 | PFR28_00870 | | Cytochrome c-type biogenesis protein CcmF | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.38 | LRK53_RS12735 | | DsbE family thiol:disulfide interchange protein | 0.45 | LRK53_RS12730 | | heme lyase CcmF/NrfE family subunit | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.37 | LRK54_RS16060 | | DsbE family thiol:disulfide interchange protein | 0.48 | LRK54_RS16065 | | heme lyase CcmF/NrfE family subunit | — | — |
| Rhodanobacter denitrificans MT42 | 0.37 | LRK55_RS15810 | | DsbE family thiol:disulfide interchange protein | 0.48 | LRK55_RS15815 | | heme lyase CcmF/NrfE family subunit | — | — |
| Rhodanobacter sp. FW510-T8 | 0.36 | OKGIIK_08590 | bcp | DsbE family thiol:disulfide interchange protein | 0.46 | OKGIIK_08585 | ccmF | c-type cytochrome biogenesis protein CcmF | — | — |
| Alteromonas macleodii MIT1002 | 0.36 | MIT1002_00966 | | Cytochrome c biogenesis protein CcmG | 0.56 | MIT1002_00965 | | Cytochrome c-type biogenesis protein CcmF | — | — |
| Lysobacter sp. OAE881 | 0.36 | ABIE51_RS08695 | | DsbE family thiol:disulfide interchange protein | 0.48 | ABIE51_RS08700 | | heme lyase CcmF/NrfE family subunit | 0.96 | 1 |
| Dyella japonica UNC79MFTsu3.2 | 0.35 | ABZR86_RS06450 | | DsbE family thiol:disulfide interchange protein | 0.48 | ABZR86_RS06445 | | heme lyase CcmF/NrfE family subunit | — | — |
| Dechlorosoma suillum PS | 0.34 | Dsui_1173 | | thiol-disulfide isomerase-like thioredoxin | 0.53 | Dsui_1172 | | c-type cytochrome biogenesis protein CcmF | — | — |
| Phaeobacter inhibens DSM 17395 | 0.33 | PGA1_c18860 | | thiol:disulfide interchange protein CcmG | 0.41 | PGA1_c17010 | | cytochrome c-type biogenesis protein CcmF | — | — |
| Rhodospirillum rubrum S1H | 0.33 | Rru_A0034 | | Periplasmic protein thiol-disulfide oxidoreductase DsbE (NCBI) | 0.43 | Rru_A0035 | | Cytochrome c-type biogenesis protein CcmF (NCBI) | — | — |
| Sinorhizobium meliloti 1021 | 0.33 | SMc03851 | | thiol:disulfide interchange protein (cytochrome C biogenesis protein) | 0.42 | SMc02363 | | cytochrome C-type biogenesis transmembrane protein | — | — |
| Azospirillum brasilense Sp245 | 0.32 | AZOBR_RS00745 | | thiol oxidoreductase DsbE | 0.45 | AZOBR_RS00740 | | heme lyase subunit CcmF | — | — |
| Xanthobacter sp. DMC5 | 0.31 | GFF973 | | Thiol:disulfide interchange protein CycY | 0.41 | GFF1779 | | Cytochrome c-type biogenesis protein CcmF | — | — |
| Rhizobium sp. OAE497 | 0.30 | ABIE40_RS18300 | | DsbE family thiol:disulfide interchange protein | 0.43 | ABIE40_RS05685 | | heme lyase CcmF/NrfE family subunit | 0.95 | 1 |
| Magnetospirillum magneticum AMB-1 | 0.29 | AMB_RS21255 | | DsbE family thiol:disulfide interchange protein | 0.47 | AMB_RS21250 | | heme lyase CcmF/NrfE family subunit | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.28 | CCNA_03788 | | thiol:disulfide interchange protein tlpA | 0.38 | CCNA_02848 | | heme chaperone-apocytochrome heme-lyase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.28 | CCNA_03788 | | thiol:disulfide interchange protein tlpA | 0.38 | CCNA_02848 | | heme chaperone-apocytochrome heme-lyase | 0.85 | 4 |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_001070 | | DsbE family thiol:disulfide interchange protein | 0.44 | TX73_009900 | | heme lyase CcmF/NrfE family subunit | — | — |
| Sphingobium sp. HT1-2 | 0.27 | GFF84 | | Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase | 0.36 | GFF83 | | Cytochrome c heme lyase subunit CcmF | — | — |
| Bosea sp. OAE506 | 0.26 | ABIE41_RS04995 | | DsbE family thiol:disulfide interchange protein | 0.41 | ABIE41_RS21455 | | heme lyase CcmF/NrfE family subunit | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.26 | Ga0059261_0171 | | Thiol-disulfide isomerase and thioredoxins | 0.30 | Ga0059261_0172 | | Cytochrome c biogenesis factor | 0.76 | 2 |
Not shown: 1 genomes with orthologs for CSW01_10260 only; 4 genomes with orthologs for CSW01_10265 only