Conservation of cofitness between CSW01_13410 and CSW01_01350 in Vibrio cholerae E7946 ATCC 55056

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13410 protein-export protein SecB 1.0 CSW01_01350 polysaccharide biosynthesis protein 0.80 11
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3860 protein-export chaperone SecB 0.49 EX28DRAFT_0519 Predicted nucleoside-diphosphate sugar epimerases
Dickeya dadantii 3937 0.70 DDA3937_RS20410 protein-export chaperone SecB 0.77 DDA3937_RS03410 polysaccharide biosynthesis protein low > 74
Dickeya dianthicola ME23 0.69 DZA65_RS00845 protein-export chaperone SecB 0.77 DZA65_RS03625 polysaccharide biosynthesis protein 0.36 75
Dickeya dianthicola 67-19 0.69 HGI48_RS00790 protein-export chaperone SecB 0.77 HGI48_RS03510 polysaccharide biosynthesis protein low > 71
Shewanella amazonensis SB2B 0.68 Sama_0062 preprotein translocase subunit SecB (RefSeq) 0.51 Sama_2244 polysaccharide biosynthesis protein (RefSeq)
Shewanella oneidensis MR-1 0.65 SO0052 secB protein-export protein SecB (NCBI ptt file) 0.49 SO3171 polysaccharide biosynthesis protein (NCBI ptt file)
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS01670 protein-export chaperone SecB 0.42 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Pseudomonas fluorescens SBW25 0.60 PFLU_RS01670 protein-export chaperone SecB 0.42 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Pseudomonas simiae WCS417 0.60 PS417_01620 preprotein translocase subunit SecB 0.41 PS417_08190 membrane protein low > 88
Pseudomonas lactucae CFBP13502 0.60 GEMAOFIL_00544 Protein-export protein SecB 0.44 GEMAOFIL_01779 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 93
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_3829 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) 0.42 Pf6N2E2_2506 nucleotide sugar epimerase/dehydratase WbpM low > 103
Pseudomonas sp. DMC3 0.59 GFF4086 Protein-export protein SecB 0.43 GFF4653 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 89
Pseudomonas segetis P6 0.59 MPMX49_04291 Protein-export protein SecB 0.41 MPMX49_02884 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 75
Pseudomonas sp. RS175 0.59 PFR28_04941 Protein-export protein SecB 0.42 PFR28_00932 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase 0.42 13
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_09755 preprotein translocase subunit SecB 0.42 AO356_03345 hypothetical protein low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_4882 protein translocase subunit secB 0.41 Psyr_3636 Polysaccharide biosynthesis protein CapD 0.34 69
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_4882 protein translocase subunit secB 0.41 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Pseudomonas sp. S08-1 0.57 OH686_14670 protein-export chaperone SecB 0.45 OH686_20915 nucleotide sugar epimerase/dehydratase WbpM 0.70 77
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_350 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) 0.42 PfGW456L13_2191 nucleotide sugar epimerase/dehydratase WbpM low > 87
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_12130 preprotein translocase subunit SecB 0.42 AO353_01970 hypothetical protein low > 101
Pseudomonas stutzeri RCH2 0.56 Psest_0165 protein-export chaperone SecB 0.42 Psest_1825 Predicted nucleoside-diphosphate sugar epimerases low > 67
Pseudomonas aeruginosa PA14 0.56 IKLFDK_27865 protein-export chaperone SecB 0.43 IKLFDK_16005 nucleotide sugar epimerase/dehydratase WbpM low > 100
Pseudomonas sp. BP01 0.56 JOY50_RS09435 secB protein-export chaperone SecB 0.43 JOY50_RS16050 nucleoside-diphosphate sugar epimerase/dehydratase
Pseudomonas sp. SVBP6 0.56 COO64_RS13310 secB protein-export chaperone SecB 0.40 COO64_RS06660 nucleoside-diphosphate sugar epimerase/dehydratase low > 93
Pseudomonas putida KT2440 0.55 PP_5053 Protein-export protein SecB 0.42 PP_1805 Polysaccharide biosynthesis protein 0.26 90
Marinobacter adhaerens HP15 0.52 HP15_3003 protein-export protein SecB 0.47 HP15_2383 nucleotide sugar epimerase/dehydratase low > 73
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS13255 protein-export chaperone SecB 0.29 ABZR86_RS05540 nucleoside-diphosphate sugar epimerase/dehydratase
Rhodanobacter denitrificans MT42 0.44 LRK55_RS10545 protein-export chaperone SecB 0.29 LRK55_RS17915 nucleoside-diphosphate sugar epimerase/dehydratase
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS10855 protein-export chaperone SecB 0.29 LRK54_RS18060 polysaccharide biosynthesis protein low > 59
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_13020 secB protein-export chaperone SecB 0.29 OKGIIK_07240 flaA1 polysaccharide biosynthesis protein
Rhodanobacter sp000427505 FW510-R12 0.44 LRK53_RS03645 protein-export chaperone SecB 0.30 LRK53_RS11300 polysaccharide biosynthesis protein
Acinetobacter radioresistens SK82 0.44 MPMX26_02634 Protein-export protein SecB 0.36 MPMX26_00062 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 36
Lysobacter sp. OAE881 0.40 ABIE51_RS00490 protein-export chaperone SecB 0.26 ABIE51_RS09370 nucleoside-diphosphate sugar epimerase/dehydratase low > 62
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS00805 preprotein translocase subunit SecB 0.40 HSERO_RS21110 dTDP-glucose 4,6-dehydratase low > 78
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.270.1 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) 0.28 Xcc-8004.2386.1 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) low > 74
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_02001 protein translocase subunit secB 0.28 H281DRAFT_04851 NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC low > 103
Paraburkholderia graminis OAS925 0.38 ABIE53_000666 preprotein translocase subunit SecB 0.28 ABIE53_001163 FlaA1/EpsC-like NDP-sugar epimerase low > 113
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS02605 protein-export protein SecB 0.30 BPHYT_RS04385 nucleoside-diphosphate sugar oxidoreductase
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS01460 protein-export chaperone SecB 0.29 QEN71_RS25590 nucleoside-diphosphate sugar epimerase/dehydratase low > 153
Dechlorosoma suillum PS 0.37 Dsui_1275 protein-export chaperone SecB 0.33 Dsui_0400 putative nucleoside-diphosphate sugar epimerase low > 51
Methylophilus sp. DMC18 0.37 GFF1796 Protein-export protein SecB 0.29 GFF568 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS06765 protein-export chaperone SecB 0.40 ABZR87_RS08730 nucleoside-diphosphate sugar epimerase/dehydratase
Ralstonia solanacearum GMI1000 0.35 RS_RS01755 protein-export protein SecB 0.35 RS_RS21965 polysaccharide biosynthesis protein low > 80
Castellaniella sp019104865 MT123 0.35 ABCV34_RS14255 protein-export chaperone SecB 0.27 ABCV34_RS13035 nucleoside-diphosphate sugar epimerase/dehydratase 0.60 3
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF1223 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) 0.42 GFF1865 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) low > 90
Variovorax sp. OAS795 0.33 ABID97_RS07400 protein-export chaperone SecB 0.36 ABID97_RS02200 nucleoside-diphosphate sugar epimerase/dehydratase low > 91
Acidovorax sp. GW101-3H11 0.32 Ac3H11_3859 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) 0.27 Ac3H11_1539 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) low > 79
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS01840 preprotein translocase subunit SecB 0.44 RR42_RS15825 capsular biosynthesis protein
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_0802 protein-export chaperone SecB 0.22 Ga0059261_4092 Predicted nucleoside-diphosphate sugar epimerases low > 68
Rhodopseudomonas palustris CGA009 0.25 TX73_001570 protein-export chaperone SecB 0.20 TX73_020640 nucleoside-diphosphate sugar epimerase/dehydratase low > 86
Phaeobacter inhibens DSM 17395 0.25 PGA1_c35180 protein-export protein SecB 0.31 PGA1_65p00170 putative capsular polysaccharide biosynthesis protein
Bosea sp. OAE506 0.23 ABIE41_RS04630 protein-export chaperone SecB 0.17 ABIE41_RS03855 nucleoside-diphosphate sugar epimerase/dehydratase
Azospirillum sp. SherDot2 0.23 MPMX19_02553 Protein-export protein SecB 0.26 MPMX19_01807 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
Magnetospirillum magneticum AMB-1 0.21 AMB_RS22995 protein-export protein SecB 0.26 AMB_RS00500 polysaccharide biosynthesis protein

Not shown: 40 genomes with orthologs for CSW01_13410 only; 12 genomes with orthologs for CSW01_01350 only