Conservation of cofitness between CSW01_07160 and CSW01_01015 in Vibrio cholerae E7946 ATCC 55056

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07160 spermidine/putrescine ABC transporter ATP-binding protein 1.0 CSW01_01015 DNA helicase II 0.51 8
Escherichia coli BW25113 0.75 b1126 potA putrescine/spermidine ABC transporter ATPase protein (NCBI) 0.71 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) low > 76
Escherichia coli ECRC101 0.75 MCAODC_22460 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.71 MCAODC_04915 uvrD DNA helicase II low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_02542 Spermidine/putrescine import ATP-binding protein PotA 0.71 OHPLBJKB_04237 DNA helicase II low > 74
Escherichia coli ECRC98 0.75 JDDGAC_06740 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.71 JDDGAC_18035 uvrD DNA helicase II low > 87
Escherichia fergusonii Becca 0.75 EFB2_02849 Spermidine/putrescine import ATP-binding protein PotA 0.71 EFB2_04824 DNA helicase II low > 86
Escherichia coli ECOR38 0.75 HEPCGN_24075 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.71 HEPCGN_13115 uvrD DNA helicase II low > 88
Escherichia coli ECRC102 0.75 NIAGMN_24750 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.71 NIAGMN_12165 uvrD DNA helicase II low > 80
Escherichia coli ECOR27 0.75 NOLOHH_20935 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.71 NOLOHH_06540 uvrD DNA helicase II low > 76
Escherichia coli ECRC62 0.75 BNILDI_19100 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.71 BNILDI_04995 uvrD DNA helicase II low > 75
Escherichia coli ECRC100 0.75 OKFHMN_00625 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.71 OKFHMN_14410 uvrD DNA helicase II low > 79
Escherichia coli ECRC99 0.75 KEDOAH_24710 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.71 KEDOAH_13740 uvrD DNA helicase II — —
Escherichia coli BL21 0.75 ECD_01124 spermidine/putrescine ABC transporter ATPase 0.71 ECD_03689 DNA-dependent ATPase I and helicase II — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3410 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 0.71 GFF241 ATP-dependent DNA helicase UvrD/PcrA low > 78
Escherichia coli Nissle 1917 0.75 ECOLIN_RS06485 spermidine/putrescine ABC transporter ATP-binding protein PotA 0.71 ECOLIN_RS21885 DNA helicase II low > 55
Klebsiella pneumoniae MKP103 0.74 KDGMDA_18860 spermidine/putrescine ABC transporter ATP-binding protein PotA 0.71 KDGMDA_09710 DNA helicase II 0.28 20
Klebsiella michiganensis M5al 0.74 BWI76_RS11255 putrescine/spermidine ABC transporter ATP-binding protein 0.71 BWI76_RS01220 DNA-dependent helicase II low > 92
Enterobacter sp. TBS_079 0.72 MPMX20_01807 Spermidine/putrescine import ATP-binding protein PotA 0.70 MPMX20_04463 DNA helicase II low > 85
Enterobacter asburiae PDN3 0.72 EX28DRAFT_1804 spermidine/putrescine ABC transporter ATP-binding subunit 0.70 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) low > 76
Pectobacterium carotovorum WPP14 0.72 HER17_RS11660 spermidine/putrescine ABC transporter ATP-binding protein PotA 0.70 HER17_RS01360 DNA helicase II low > 75
Marinobacter adhaerens HP15 0.55 HP15_4062 spermidine/putrescine ABC transporter, ATP-binding protein 0.56 HP15_3403 UvrD/REP helicase low > 73
Desulfovibrio vulgaris Hildenborough JW710 0.55 DVU0098 potA polyamine ABC transporter, ATP-binding protein (TIGR) 0.19 DVU0156 pcrA ATP-dependent DNA helicase, UvrD/REP family (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.52 DvMF_1960 potA putrescine/spermidine ABC transporter ATPase protein (RefSeq) 0.17 DvMF_1967 UvrD/REP helicase (RefSeq) low > 51
Fusobacterium nucleatum SB010 0.41 HUW76_00750 ABC transporter ATP-binding protein 0.29 HUW76_07175 UvrD-helicase domain-containing protein low > 35
Pseudomonas aeruginosa PUPa3 0.41 DQ20_RS42185 ABC transporter ATP-binding protein 0.60 DQ20_RS57955 uvrD;go_function=DNA DNA helicase II low > 101
Pseudomonas aeruginosa MRSN321 0.41 DY961_RS14945 ABC transporter ATP-binding protein 0.60 DY961_RS25505 uvrD;go_function=DNA DNA helicase II low > 100
Pseudomonas aeruginosa PA14 0.40 IKLFDK_18415 Spermidine/putrescine import ATP-binding protein PotA 0.60 IKLFDK_26200 DNA helicase II low > 98
Rhizobium sp. OAE497 0.40 ABIE40_RS12075 ABC transporter ATP-binding protein 0.33 ABIE40_RS11670 UvrD-helicase domain-containing protein low > 107
Sinorhizobium meliloti 1021 0.39 SM_b20281 spermidine/putrescine ABC transporter ATP-binding protein 0.31 SMc01461 DNA helicase II protein low > 103
Rhodospirillum rubrum S1H 0.39 Rru_A1017 Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) 0.32 Rru_A1536 UvrD/REP helicase (NCBI) low > 58
Serratia liquefaciens MT49 0.38 IAI46_08375 putrescine ABC transporter ATP-binding subunit PotG 0.71 IAI46_00735 DNA helicase II low > 87
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS36445 ABC transporter ATP-binding protein 0.44 QEN71_RS05110 3'-5' exonuclease — —
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_04275 polyamine ABC transporter ATP-binding protein 0.59 AO353_10055 DNA helicase II low > 101
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_4763 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 0.59 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA low > 87
Pseudomonas sp. S08-1 0.38 OH686_06910 ABC transporter ATP-binding protein YdcT 0.59 OH686_13045 ATP-dependent DNA helicase UvrD/PcrA low > 80
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_3027 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 0.59 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA low > 87
Rahnella sp. WP5 0.38 EX31_RS09625 putrescine ABC transporter ATP-binding subunit PotG 0.68 EX31_RS15175 DNA helicase II low > 89
Pseudomonas segetis P6 0.38 ACVTMO_RS19685 ABC transporter ATP-binding protein 0.58 ACVTMO_RS00885 uvrD DNA helicase II low > 75
Pseudomonas fluorescens SBW25 0.38 PFLU_RS05995 ABC transporter ATP-binding protein 0.59 PFLU_RS29900 DNA helicase II low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS05995 ABC transporter ATP-binding protein 0.59 PFLU_RS29900 DNA helicase II low > 109
Bosea sp. OAE506 0.38 ABIE41_RS02370 ABC transporter ATP-binding protein 0.35 ABIE41_RS12730 UvrD-helicase domain-containing protein low > 77
Pseudomonas sp. SVBP6 0.38 COO64_RS05020 ABC transporter ATP-binding protein 0.60 COO64_RS01845 uvrD DNA helicase II 0.55 43
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS22460 ABC transporter ATP-binding protein 0.43 ABZR87_RS15705 UvrD-helicase domain-containing protein low > 80
Azospirillum brasilense Sp245 0.37 AZOBR_RS08840 ABC transporter ATP-binding protein 0.35 AZOBR_RS12445 DNA helicase II low > 97
Castellaniella sp019104865 MT123 0.37 ABCV34_RS02365 polyamine ABC transporter ATP-binding protein 0.42 ABCV34_RS05210 UvrD-helicase domain-containing protein low > 48
Azospirillum sp. SherDot2 0.37 MPMX19_04509 Spermidine/putrescine import ATP-binding protein PotA 0.34 MPMX19_01610 ATP-dependent DNA helicase PcrA low > 112
Magnetospirillum magneticum AMB-1 0.37 AMB_RS13205 polyamine ABC transporter ATP-binding protein 0.34 AMB_RS03725 DNA helicase II low > 64
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_01356 Spermidine/putrescine import ATP-binding protein PotA 0.59 GEMAOFIL_00116 DNA helicase II low > 96
Pseudomonas sp. RS175 0.37 PFR28_00346 Spermidine/putrescine import ATP-binding protein PotA 0.59 PFR28_04523 DNA helicase II low > 88
Pseudomonas sp. BP01 0.37 JOY50_RS11770 ABC transporter ATP-binding protein 0.60 JOY50_RS08735 uvrD DNA helicase II low > 84
Pseudomonas putida KT2440 0.37 PP_1484 predicted polyamine ABC transporter, ATP-binding protein 0.60 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex low > 96
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_06300 polyamine ABC transporter ATP-binding protein 0.59 AO356_11990 DNA helicase II low > 104
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_4615 Spermidine/putrescine ABC transporter ATP-binding subunit 0.58 Psyr_5065 ATP-dependent DNA helicase UvrD low > 86
Shewanella loihica PV-4 0.37 Shew_0974 spermidine/putrescine ABC transporter ATPase subunit (RefSeq) 0.66 Shew_3385 uvrD DNA-dependent helicase II (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_4615 Spermidine/putrescine ABC transporter ATP-binding subunit 0.58 Psyr_5065 ATP-dependent DNA helicase UvrD low > 86
Erwinia amylovora T8 0.37 OLJFJH_16305 putrescine ABC transporter ATP-binding subunit PotG 0.68 OLJFJH_06425 DNA helicase II low > 58
Pantoea agglomerans CFBP13505 P0401 0.36 PagCFBP13505_RS04290 putrescine ABC transporter ATP-binding subunit PotG 0.68 PagCFBP13505_RS15370 DNA helicase II low > 74
Pantoea sp. MT58 0.36 IAI47_13040 putrescine ABC transporter ATP-binding subunit PotG 0.69 IAI47_18390 DNA helicase II low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF282 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 0.42 GFF5598 ATP-dependent DNA helicase UvrD/PcrA — —
Dickeya dadantii 3937 0.36 DDA3937_RS09465 putrescine ABC transporter ATP-binding subunit PotG 0.70 DDA3937_RS19880 DNA helicase II low > 74
Shewanella sp. ANA-3 0.36 Shewana3_3096 spermidine/putrescine ABC transporter ATPase subunit (RefSeq) 0.67 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) low > 73
Pseudomonas sp. DMC3 0.36 GFF285 Spermidine/putrescine import ATP-binding protein PotA 0.59 GFF512 DNA helicase II low > 89
Shewanella oneidensis MR-1 0.36 SO1271 polyamine ABC transporter, ATP-binding protein (NCBI ptt file) 0.67 SO0467 uvrD DNA helicase II (NCBI ptt file) low > 76
Acidovorax sp. GW101-3H11 0.36 Ac3H11_4180 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 0.44 Ac3H11_1660 ATP-dependent DNA helicase UvrD/PcrA low > 79
Variovorax sp. SCN45 0.36 GFF5594 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 0.43 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) low > 127
Pseudomonas stutzeri RCH2 0.36 Psest_4282 spermidine/putrescine ABC transporter ATP-binding subunit 0.59 Psest_4098 Superfamily I DNA and RNA helicases low > 67
Dickeya dianthicola ME23 0.36 DZA65_RS09795 putrescine ABC transporter ATP-binding subunit PotG 0.70 DZA65_RS21080 DNA helicase II low > 75
Dickeya dianthicola 67-19 0.36 HGI48_RS09485 putrescine ABC transporter ATP-binding subunit PotG 0.70 HGI48_RS20035 DNA helicase II low > 71
Pseudomonas orientalis W4I3 0.36 QF045_RS01490 polyamine ABC transporter ATP-binding protein 0.59 QF045_RS02600 DNA helicase II low > 93
Phaeobacter inhibens DSM 17395 0.35 PGA1_c34430 putrescine transport ATP-binding protein PotG 0.34 PGA1_c09450 DNA helicase II UvrD low > 62
Shewanella amazonensis SB2B 0.35 Sama_2641 polyamine ABC transporter, ATP-binding protein (RefSeq) 0.66 Sama_0419 uvrD DNA-dependent helicase II (RefSeq) low > 62
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS03005 ABC transporter ATP-binding protein 0.43 HSERO_RS02160 DNA-dependent helicase low > 78
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS01235 ABC transporter ATP-binding protein 0.42 RALBFv3_RS03775 DNA-dependent helicase — —
Ralstonia solanacearum UW163 0.33 UW163_RS14545 ABC transporter ATP-binding protein 0.42 UW163_RS09895 DNA-dependent helicase — —

Not shown: 8 genomes with orthologs for CSW01_07160 only; 39 genomes with orthologs for CSW01_01015 only