| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_00480 | | MATE family efflux transporter | 1.0 | CSW01_00205 | | hemolysin III family protein | 0.47 | 6 |
| Shewanella amazonensis SB2B | 0.42 | Sama_3501 | | DNA-damage-inducible protein F (RefSeq) | 0.44 | Sama_1862 | | hemolysin III family channel protein (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.41 | SO4617 | dinF | DNA-damage-inducible protein F (NCBI ptt file) | 0.48 | SO2447 | | channel protein, hemolysin III family subfamily (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.41 | Shew_0107 | | MATE efflux family protein (RefSeq) | 0.48 | Shew_2098 | | hemolysin III family channel protein (RefSeq) | low | > 60 |
| Serratia liquefaciens MT49 | 0.40 | IAI46_23000 | | MATE family efflux transporter DinF | 0.72 | IAI46_20775 | | hemolysin III family protein | low | > 87 |
| Shewanella sp. ANA-3 | 0.39 | Shewana3_4001 | | MATE efflux family protein (RefSeq) | 0.46 | Shewana3_1934 | | hemolysin III family channel protein (RefSeq) | low | > 73 |
| Enterobacter asburiae PDN3 | 0.39 | EX28DRAFT_4268 | | putative efflux protein, MATE family | 0.76 | EX28DRAFT_2950 | | channel protein, hemolysin III family | low | > 76 |
| Escherichia coli BW25113 | 0.39 | b4044 | dinF | DNA-damage-inducible SOS response protein (NCBI) | 0.73 | b2899 | yqfA | predicted oxidoreductase, inner membrane subunit (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.39 | NOLOHH_05215 | dinF | MATE family efflux transporter DinF | 0.73 | NOLOHH_11465 | yqfA | hemolysin III family protein | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.39 | GFF1413 | | DNA-damage-inducible protein F | 0.74 | GFF2997 | | COG1272: Predicted membrane protein hemolysin III homolog | low | > 78 |
| Escherichia coli BL21 | 0.39 | ECD_03916 | | oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein | 0.73 | ECD_02731 | | hemolysin III family HylIII inner membrane protein | low | > 61 |
| Escherichia coli ECRC62 | 0.39 | BNILDI_06305 | dinF | MATE family efflux transporter DinF | 0.73 | BNILDI_10000 | yqfA | hemolysin III family protein | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_03999 | | DNA damage-inducible protein F | 0.73 | OHPLBJKB_00816 | | hypothetical protein | low | > 74 |
| Pantoea sp. MT58 | 0.38 | IAI47_17885 | | MATE family efflux transporter DinF | 0.67 | IAI47_03795 | | hemolysin III family protein | low | > 76 |
| Escherichia coli ECRC101 | 0.38 | MCAODC_03560 | dinF | MATE family efflux transporter DinF | 0.73 | MCAODC_10065 | yqfA | hemolysin III family protein | low | > 87 |
| Escherichia coli ECRC98 | 0.38 | JDDGAC_16685 | dinF | MATE family efflux transporter DinF | 0.73 | JDDGAC_23185 | yqfA | hemolysin III family protein | low | > 87 |
| Enterobacter sp. TBS_079 | 0.38 | MPMX20_00260 | | DNA damage-inducible protein F | 0.76 | MPMX20_03758 | | hypothetical protein | low | > 85 |
| Escherichia coli ECRC102 | 0.38 | NIAGMN_10810 | dinF | MATE family efflux transporter DinF | 0.73 | NIAGMN_17310 | yqfA | hemolysin III family protein | 0.46 | 35 |
| Escherichia coli ECRC100 | 0.38 | OKFHMN_13060 | dinF | MATE family efflux transporter DinF | 0.73 | OKFHMN_19545 | yqfA | hemolysin III family protein | low | > 79 |
| Escherichia coli ECRC99 | 0.38 | KEDOAH_15100 | dinF | MATE family efflux transporter DinF | 0.73 | KEDOAH_08595 | yqfA | hemolysin III family protein | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.38 | PagCFBP13505_RS21210 | | MATE family efflux transporter DinF | 0.69 | PagCFBP13505_RS15905 | | hemolysin III family protein | low | > 74 |
| Rahnella sp. WP5 | 0.38 | EX31_RS11850 | | MATE family efflux transporter DinF | 0.69 | EX31_RS21610 | | hemolysin III family protein | low | > 89 |
| Klebsiella michiganensis M5al | 0.38 | BWI76_RS01880 | | MATE family efflux transporter | 0.76 | BWI76_RS23840 | | hemolysin III family protein | low | > 92 |
| Escherichia fergusonii Becca | 0.38 | EFB2_04559 | | DNA damage-inducible protein F | 0.73 | EFB2_01002 | | hypothetical protein | low | > 86 |
| Escherichia coli Nissle 1917 | 0.38 | ECOLIN_RS23340 | | MATE family efflux transporter DinF | 0.73 | ECOLIN_RS16150 | | hemolysin III family protein | low | > 55 |
| Klebsiella pneumoniae MKP103 | 0.38 | KDGMDA_10335 | | MATE family efflux transporter DinF | 0.76 | KDGMDA_04325 | | hemolysin III family protein | low | > 95 |
| Escherichia coli ECOR38 | 0.37 | HEPCGN_11580 | dinF | MATE family efflux transporter DinF | 0.73 | HEPCGN_18835 | yqfA | hemolysin III family protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.37 | Pf6N2E2_3500 | | DNA-damage-inducible protein F | 0.35 | Pf6N2E2_4629 | | COG1272: Predicted membrane protein hemolysin III homolog | low | > 103 |
| Pseudomonas sp. DMC3 | 0.37 | GFF3325 | | DNA damage-inducible protein F | 0.34 | GFF181 | | hypothetical protein | low | > 89 |
| Marinobacter adhaerens HP15 | 0.37 | HP15_3770 | | MATE efflux family protein | 0.44 | HP15_2974 | | channel protein, hemolysin III family | low | > 73 |
| Pseudomonas fluorescens FW300-N1B4 | 0.37 | Pf1N1B4_1292 | | DNA-damage-inducible protein F | 0.34 | Pf1N1B4_2371 | | COG1272: Predicted membrane protein hemolysin III homolog | low | > 87 |
| Kangiella aquimarina DSM 16071 | 0.36 | B158DRAFT_0674 | | putative efflux protein, MATE family | 0.47 | B158DRAFT_1582 | | channel protein, hemolysin III family | low | > 40 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.36 | Psyr_4384 | | Multi antimicrobial extrusion protein MatE | 0.35 | Psyr_0452 | | HylII | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.36 | Psyr_4384 | | Multi antimicrobial extrusion protein MatE | 0.35 | Psyr_0452 | | HylII | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.36 | PfGW456L13_40 | | DNA-damage-inducible protein F | 0.34 | PfGW456L13_1038 | | COG1272: Predicted membrane protein hemolysin III homolog | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.36 | AO353_13735 | | MATE family efflux transporter | 0.33 | AO353_08075 | | hemolysin III | low | > 101 |
| Bacteroides stercoris CC31F | 0.35 | HMPREF1181_RS09420 | | MATE family efflux transporter | 0.24 | HMPREF1181_RS16820 | | hemolysin III family protein | low | > 56 |
| Phocaeicola vulgatus CL09T03C04 | 0.35 | HMPREF1058_RS13880 | | MATE family efflux transporter | 0.24 | HMPREF1058_RS00565 | | hemolysin III family protein | low | > 67 |
| Bacteroides ovatus ATCC 8483 | 0.35 | BACOVA_03104 | | MATE efflux family protein | 0.28 | BACOVA_00687 | | hypothetical protein | low | > 96 |
| Pseudomonas fluorescens FW300-N2C3 | 0.35 | AO356_08140 | | MATE family efflux transporter | 0.35 | AO356_13560 | | hemolysin III | low | > 104 |
| Erwinia amylovora T8 | 0.35 | OLJFJH_03575 | | MATE family efflux transporter DinF | 0.64 | OLJFJH_08800 | | hemolysin III family protein | low | > 58 |
| Phocaeicola dorei CL03T12C01 | 0.35 | ABI39_RS09485 | | MATE family efflux transporter | 0.24 | ABI39_RS08185 | | hemolysin III family protein | low | > 72 |
| Pseudomonas stutzeri RCH2 | 0.34 | Psest_3364 | | putative efflux protein, MATE family | 0.32 | Psest_3779 | | channel protein, hemolysin III family | low | > 67 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.34 | BT2241 | | DNA-damage-inducible protein F (NCBI ptt file) | 0.27 | BT1983 | | hemolysin III (NCBI ptt file) | low | > 81 |
| Pseudomonas simiae WCS417 | 0.34 | PS417_03010 | | XRE family transcriptional regulator | 0.34 | PS417_26570 | | hemolysin III | low | > 88 |
| Pseudomonas orientalis W4I3 | 0.34 | QF045_RS06045 | | MATE family efflux transporter | 0.34 | QF045_RS00960 | | hemolysin III family protein | low | > 93 |
| Ralstonia sp. UNC404CL21Col | 0.34 | ABZR87_RS22695 | | MATE family efflux transporter | 0.32 | ABZR87_RS02015 | | hemolysin III family protein | low | > 80 |
| Alteromonas macleodii MIT1002 | 0.34 | MIT1002_04023 | | DNA-damage-inducible protein F | 0.52 | MIT1002_00886 | | hemolysin | low | > 70 |
| Pseudomonas putida KT2440 | 0.34 | PP_0569 | | MATE efflux family protein | 0.37 | PP_4986 | | Channel protein, hemolysin III family | low | > 96 |
| Pseudomonas lactucae CFBP13502 | 0.34 | GEMAOFIL_00834 | | DNA damage-inducible protein F | 0.35 | GEMAOFIL_05445 | | hypothetical protein | low | > 96 |
| Pseudomonas sp. BP01 | 0.33 | JOY50_RS23180 | | MATE family efflux transporter | 0.35 | JOY50_RS09760 | | hemolysin III family protein | low | > 84 |
| Pseudomonas sp. RS175 | 0.33 | PFR28_05231 | | DNA damage-inducible protein F | 0.35 | PFR28_04213 | | hypothetical protein | low | > 88 |
| Paraburkholderia sabiae LMG 24235 | 0.33 | QEN71_RS04895 | | MATE family efflux transporter | 0.38 | QEN71_RS02270 | | hemolysin III family protein | low | > 153 |
| Dyella japonica UNC79MFTsu3.2 | 0.33 | ABZR86_RS00490 | | MATE family efflux transporter | 0.44 | ABZR86_RS18160 | | hemolysin III family protein | low | > 74 |
| Burkholderia phytofirmans PsJN | 0.33 | BPHYT_RS14080 | | multidrug transporter MatE | 0.38 | BPHYT_RS16440 | | hemolysin D | low | > 109 |
| Pseudomonas aeruginosa PA14 | 0.32 | IKLFDK_29470 | | DNA-damage-inducible protein F | 0.33 | IKLFDK_29400 | | hemolysin III | low | > 98 |
| Pseudomonas fluorescens SBW25 | 0.32 | PFLU_RS03090 | | MATE family efflux transporter | 0.34 | PFLU_RS28225 | | hemolysin III family protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.32 | PFLU_RS03090 | | MATE family efflux transporter | 0.34 | PFLU_RS28225 | | hemolysin III family protein | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.32 | H281DRAFT_04426 | | multidrug resistance protein, MATE family | 0.37 | H281DRAFT_04221 | | hemolysin III | low | > 103 |
| Dinoroseobacter shibae DFL-12 | 0.32 | Dshi_0845 | | MATE efflux family protein (RefSeq) | 0.24 | Dshi_2910 | | Hly-III family protein (RefSeq) | low | > 64 |
| Parabacteroides merdae CL09T00C40 | 0.31 | HMPREF1078_RS15090 | | MATE family efflux transporter | 0.34 | HMPREF1078_RS01905 | | hemolysin III family protein | low | > 61 |
| Pseudomonas sp. SVBP6 | 0.31 | COO64_RS18420 | | MATE family efflux transporter | 0.35 | COO64_RS13640 | | hemolysin III family protein | low | > 93 |
| Pseudomonas aeruginosa PUPa3 | 0.31 | DQ20_RS52175 | | MATE family efflux transporter | 0.33 | DQ20_RS52110 | | hemolysin III family protein | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.30 | DY961_RS09875 | | MATE family efflux transporter | 0.33 | DY961_RS09940 | | hemolysin III family protein | low | > 100 |
| Rhodopseudomonas palustris CGA009 | 0.27 | TX73_004125 | | MATE family efflux transporter | 0.30 | TX73_008140 | | hemolysin III family protein | low | > 86 |
| Pseudomonas sp. S08-1 | 0.27 | OH686_07530 | | MATE efflux family protein | 0.34 | OH686_06045 | | Predicted membrane protein, hemolysin III-related | low | > 80 |
| Agrobacterium fabrum C58 | 0.25 | Atu5428 | | DNA-damage-inducible protein F | 0.34 | Atu0906 | | Hemolysin III | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.25 | SMc02244 | | transmembrane protein | 0.34 | SMc00455 | | hypothetical protein | low | > 103 |
| Rhizobium sp. OAE497 | 0.23 | ABIE40_RS02425 | | MATE family efflux transporter | 0.32 | ABIE40_RS04960 | | hemolysin III family protein | low | > 107 |
| Cellulophaga baltica 18 | 0.16 | M666_RS04275 | | MATE family efflux transporter | 0.36 | M666_RS10220 | | hemolysin III family protein | low | > 67 |
Not shown: 9 genomes with orthologs for CSW01_00480 only; 24 genomes with orthologs for CSW01_00205 only