| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Caulobacter crescentus NA1000 Δfur | 1.0 | CCNA_03517 | | cytochrome c oxidase polypeptide I coxA | 1.0 | CCNA_02489 | | acetate/3-ketoacid CoA transferase, subunit B | 0.63 | 12 |
| Caulobacter crescentus NA1000 | 1.00 | CCNA_03517 | | cytochrome c oxidase polypeptide I coxA | 1.00 | CCNA_02489 | | acetate/3-ketoacid CoA transferase, subunit B | low | > 66 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.82 | A4249_RS00110 | | cytochrome c oxidase subunit I | 0.69 | A4249_RS02955 | | 3-oxoacid CoA-transferase subunit B | low | > 48 |
| Agrobacterium fabrum C58 | 0.72 | Atu0768 | | cytochrome-c oxidase chain I | 0.44 | Atu4548 | | 3-oxoadipate CoA-transferase subunit B | low | > 89 |
| Rhodopseudomonas palustris CGA009 | 0.71 | TX73_004290 | | cytochrome c oxidase subunit I | 0.70 | TX73_021540 | | 3-oxoacid CoA-transferase subunit B | low | > 86 |
| Rhizobium sp. OAE497 | 0.70 | ABIE40_RS04065 | | cytochrome c oxidase subunit I | 0.43 | ABIE40_RS19555 | | CoA transferase subunit B | low | > 107 |
| Sphingomonas koreensis DSMZ 15582 | 0.68 | Ga0059261_2008 | | cytochrome c oxidase, subunit I | 0.73 | Ga0059261_0263 | | 3-oxoacid CoA-transferase, B subunit | low | > 68 |
| Bosea sp. OAE506 | 0.66 | ABIE41_RS22950 | | cytochrome c oxidase subunit I | 0.72 | ABIE41_RS01845 | | 3-oxoacid CoA-transferase subunit B | low | > 77 |
| Azospirillum sp. SherDot2 | 0.66 | MPMX19_00885 | | Cytochrome c oxidase subunit 1 | 0.48 | MPMX19_03463 | | Butyrate--acetoacetate CoA-transferase subunit B | — | — |
| Dinoroseobacter shibae DFL-12 | 0.61 | Dshi_2383 | | Cytochrome c oxidase subunit I type (RefSeq) | 0.69 | Dshi_1134 | | 3-oxoacid CoA-transferase, B subunit (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.60 | PGA1_c06710 | | cytochrome c oxidase subunit 1-beta | 0.64 | PGA1_c06200 | | probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B | — | — |
| Ralstonia solanacearum PSI07 | 0.53 | RPSI07_RS22360 | | cytochrome c oxidase subunit I | 0.68 | RPSI07_RS15665 | | CoA transferase subunit B | — | — |
| Ralstonia solanacearum UW163 | 0.53 | UW163_RS02630 | | cytochrome c oxidase subunit I | 0.67 | UW163_RS15135 | | CoA transferase subunit B | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.53 | RALBFv3_RS10950 | | cytochrome c oxidase subunit I | 0.67 | RALBFv3_RS01825 | | CoA transferase subunit B | — | — |
| Ralstonia solanacearum GMI1000 | 0.53 | RS_RS01790 | | cytochrome c oxidase subunit I | 0.66 | RS_RS07910 | | CoA transferase subunit B | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.53 | LRK54_RS07120 | | cytochrome c oxidase subunit I | 0.63 | LRK54_RS04080 | | 3-oxoacid CoA-transferase subunit B | low | > 59 |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS06800 | | cytochrome c oxidase subunit I | 0.63 | ABZR87_RS13765 | | CoA transferase subunit B | — | — |
| Rhodanobacter denitrificans MT42 | 0.53 | LRK55_RS06860 | | cytochrome c oxidase subunit I | 0.63 | LRK55_RS03850 | | 3-oxoacid CoA-transferase subunit B | low | > 63 |
| Variovorax sp. OAS795 | 0.53 | ABID97_RS12000 | | cytochrome c oxidase subunit I | 0.61 | ABID97_RS19435 | | 3-oxoacid CoA-transferase subunit B | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.52 | GFF689 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.57 | GFF5196 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) | — | — |
| Castellaniella sp019104865 MT123 | 0.52 | ABCV34_RS13270 | | cytochrome c oxidase subunit I | 0.64 | ABCV34_RS00775 | | 3-oxoacid CoA-transferase subunit B | low | > 48 |
| Variovorax sp. SCN45 | 0.52 | GFF2298 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.61 | GFF7372 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.51 | Ac3H11_3891 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.61 | Ac3H11_131 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.51 | HSERO_RS20785 | | cytochrome oxidase subunit I | 0.60 | HSERO_RS23185 | | succinyl-CoA:3-ketoacid-CoA transferase | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS01880 | | cytochrome oxidase subunit I | 0.64 | RR42_RS06560 | | succinyl-CoA:3-ketoacid-CoA transferase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.51 | Xcc-8004.4845.1 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.66 | Xcc-8004.4477.1 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) | low | > 74 |
| Paraburkholderia graminis OAS925 | 0.51 | ABIE53_000674 | | cytochrome c oxidase subunit 1 | 0.69 | ABIE53_002908 | | 3-oxoacid CoA-transferase subunit B | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.51 | QEN71_RS01500 | | cytochrome c oxidase subunit I | 0.68 | QEN71_RS05250 | | CoA transferase subunit B | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.51 | H281DRAFT_01993 | | cytochrome c oxidase subunit 1 | 0.69 | H281DRAFT_04496 | | 3-oxoacid CoA-transferase subunit B | — | — |
| Burkholderia phytofirmans PsJN | 0.51 | BPHYT_RS02645 | | cytochrome oxidase subunit I | 0.68 | BPHYT_RS13670 | | succinyl-CoA:3-ketoacid-CoA transferase | — | — |
| Kangiella aquimarina DSM 16071 | 0.50 | B158DRAFT_0136 | | cytochrome c oxidase, subunit I | 0.64 | B158DRAFT_2504 | | 3-oxoacid CoA-transferase, B subunit | low | > 40 |
| Lysobacter sp. OAE881 | 0.50 | ABIE51_RS19205 | | cytochrome c oxidase subunit I | 0.65 | ABIE51_RS04385 | | CoA transferase subunit B | low | > 62 |
| Shewanella amazonensis SB2B | 0.50 | Sama_3484 | | cytochrome-c oxidase (RefSeq) | 0.62 | Sama_0519 | | 3-oxoacid CoA-transferase (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.50 | SO4607 | | cytochrome c oxidase, subunit I (NCBI ptt file) | 0.62 | SO1891 | | 3-oxoadipate CoA-succinyl transferase, beta subunit (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.50 | MIT1002_04034 | | Cytochrome c oxidase subunit 1 | 0.56 | MIT1002_02000 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B | low | > 70 |
| Shewanella sp. ANA-3 | 0.50 | Shewana3_3992 | | cytochrome c oxidase, subunit I (RefSeq) | 0.61 | Shewana3_1666 | | butyryl-CoA:acetate CoA transferase (RefSeq) | low | > 73 |
| Pseudomonas simiae WCS417 | 0.50 | PS417_00305 | | cytochrome oxidase subunit I | 0.62 | PS417_10520 | | succinyl-CoA:3-ketoacid-CoA transferase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.50 | PFLU_RS00295 | | cytochrome c oxidase subunit I | 0.62 | PFLU_RS10580 | | CoA transferase subunit B | 0.41 | 82 |
| Pseudomonas fluorescens SBW25-INTG | 0.50 | PFLU_RS00295 | | cytochrome c oxidase subunit I | 0.62 | PFLU_RS10580 | | CoA transferase subunit B | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.49 | AO353_10835 | | cytochrome oxidase subunit I | 0.61 | AO353_27940 | | succinyl-CoA--3-ketoacid-CoA transferase | low | > 101 |
| Shewanella loihica PV-4 | 0.49 | Shew_0124 | | cytochrome-c oxidase (RefSeq) | 0.61 | Shew_2576 | | 3-oxoacid CoA-transferase, B subunit (RefSeq) | low | > 60 |
| Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_4099 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.62 | Pf6N2E2_2112 | | Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit B (from data) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.49 | AO356_11165 | | cytochrome oxidase subunit I | 0.62 | AO356_21645 | | succinyl-CoA--3-ketoacid-CoA transferase | low | > 104 |
| Pseudomonas sp. RS175 | 0.49 | PFR28_04690 | | Cytochrome c oxidase subunit 1 | 0.62 | PFR28_01324 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.49 | Psest_4327 | | cytochrome c oxidase, subunit I | 0.67 | Psest_1077 | | acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) (from data) | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.49 | PfGW456L13_614 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.15 | PfGW456L13_4591 | | 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) (from data) | low | > 87 |
| Pseudomonas putida KT2440 | 0.49 | PP_0104 | | Cytochrome c oxidase subunit 1 | 0.60 | PP_3123 | | acetoacetyl CoA-transferase (subunit B) | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.49 | Pf1N1B4_1854 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.62 | Pf1N1B4_5834 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) | low | > 87 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.38 | CA264_13925 | | cytochrome c oxidase subunit I | 0.62 | CA264_04620 | | succinyl-CoA--3-ketoacid-CoA transferase | low | > 74 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.37 | Echvi_2103 | | Heme/copper-type cytochrome/quinol oxidases, subunit 1 | 0.63 | Echvi_3271 | | 3-oxoacid CoA-transferase, B subunit | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.37 | ABZR88_RS03660 | | cbb3-type cytochrome c oxidase subunit I | 0.60 | ABZR88_RS05195 | | 3-oxoacid CoA-transferase subunit B | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.36 | CA265_RS17815 | | cytochrome c oxidase subunit I | 0.64 | CA265_RS06310 | | succinyl-CoA--3-ketoacid-CoA transferase | — | — |
Not shown: 10 genomes with orthologs for CCNA_03517 only; 18 genomes with orthologs for CCNA_02489 only