Conservation of cofitness between BPHYT_RS30235 and BPHYT_RS17520 in Burkholderia phytofirmans PsJN

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS30235 tartrate dehydrogenase 1.0 BPHYT_RS17520 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.24 9
Paraburkholderia graminis OAS925 0.98 ABIE53_005023 tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase 0.81 ABIE53_003664 release factor glutamine methyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_06345 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase 0.85 H281DRAFT_05691 [protein release factor]-glutamine N5-methyltransferase
Paraburkholderia sabiae LMG 24235 0.88 QEN71_RS32005 tartrate dehydrogenase 0.71 QEN71_RS27675 peptide chain release factor N(5)-glutamine methyltransferase low > 153
Ralstonia solanacearum PSI07 0.80 RPSI07_RS07555 tartrate dehydrogenase 0.47 RPSI07_RS10635 peptide chain release factor N(5)-glutamine methyltransferase
Ralstonia solanacearum GMI1000 0.79 RS_RS24845 tartrate dehydrogenase 0.49 RS_RS14545 peptide chain release factor N(5)-glutamine methyltransferase
Ralstonia solanacearum UW163 0.78 UW163_RS16880 tartrate dehydrogenase 0.47 UW163_RS07030 peptide chain release factor N(5)-glutamine methyltransferase
Ralstonia solanacearum IBSBF1503 0.78 RALBFv3_RS16145 tartrate dehydrogenase 0.47 RALBFv3_RS06595 peptide chain release factor N(5)-glutamine methyltransferase low > 76
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS21505 tartrate dehydrogenase 0.48 ABZR87_RS02260 peptide chain release factor N(5)-glutamine methyltransferase
Serratia liquefaciens MT49 0.76 IAI46_21025 tartrate dehydrogenase 0.35 IAI46_10285 peptide chain release factor N(5)-glutamine methyltransferase low > 86
Acidovorax sp. GW101-3H11 0.75 Ac3H11_3259 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.41 Ac3H11_4779 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_28225 tartrate dehydrogenase 0.38 AO353_14790 protein-(glutamine-N5) methyltransferase, release factor-specific
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_4932 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.39 Pf1N1B4_2920 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS07390 tartrate dehydrogenase 0.48 HSERO_RS21375 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase low > 78
Variovorax sp. OAS795 0.75 ABID97_RS25885 tartrate dehydrogenase 0.39 ABID97_RS07185 peptide chain release factor N(5)-glutamine methyltransferase
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_26735 tartrate dehydrogenase 0.40 AO356_16500 protein-(glutamine-N5) methyltransferase, release factor-specific
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_369 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.39 Pf6N2E2_5222 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2
Klebsiella michiganensis M5al 0.74 BWI76_RS10680 tartrate dehydrogenase 0.37 BWI76_RS17430 protein-(glutamine-N5) methyltransferase, release factor-specific
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_2396 Tartrate dehydrogenase 0.37 Psyr_0950 [protein release factor]-glutamine N5-methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_2396 Tartrate dehydrogenase 0.37 Psyr_0950 [protein release factor]-glutamine N5-methyltransferase
Escherichia coli ECOR38 0.73 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.35 HEPCGN_24920 prmC peptide chain release factor N(5)-glutamine methyltransferase low > 87
Escherichia coli ECOR27 0.73 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.35 NOLOHH_20605 prmC peptide chain release factor N(5)-glutamine methyltransferase
Escherichia coli ECRC98 0.72 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.35 JDDGAC_06120 prmC peptide chain release factor N(5)-glutamine methyltransferase low > 86
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS19735 tartrate dehydrogenase 0.34 PFLU_RS03660 peptide chain release factor N(5)-glutamine methyltransferase
Pseudomonas fluorescens SBW25 0.72 PFLU_RS19735 tartrate dehydrogenase 0.34 PFLU_RS03660 peptide chain release factor N(5)-glutamine methyltransferase
Escherichia coli ECRC62 0.72 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.35 BNILDI_18760 prmC peptide chain release factor N(5)-glutamine methyltransferase low > 75
Escherichia coli ECRC99 0.72 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.35 KEDOAH_25450 prmC peptide chain release factor N(5)-glutamine methyltransferase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] 0.35 OHPLBJKB_02475 Release factor glutamine methyltransferase low > 73
Escherichia coli BW25113 0.72 b1800 yeaU predicted dehydrogenase (NCBI) 0.35 b1212 prmC N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (NCBI)
Escherichia coli ECRC101 0.72 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.35 MCAODC_21805 prmC peptide chain release factor N(5)-glutamine methyltransferase
Escherichia coli ECRC100 0.72 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.35 OKFHMN_28455 prmC peptide chain release factor N(5)-glutamine methyltransferase
Escherichia coli ECRC102 0.72 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.35 NIAGMN_27780 prmC peptide chain release factor N(5)-glutamine methyltransferase
Escherichia coli BL21 0.72 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 0.36 ECD_01187 RF-1 and RF-2 N5-glutamine methyltransferase
Castellaniella sp019104865 MT123 0.72 ABCV34_RS14695 tartrate dehydrogenase 0.47 ABCV34_RS14060 peptide chain release factor N(5)-glutamine methyltransferase
Rhodopseudomonas palustris CGA009 0.67 TX73_008960 tartrate dehydrogenase 0.27 TX73_003140 peptide chain release factor N(5)-glutamine methyltransferase
Variovorax sp. SCN45 0.66 GFF6198 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) 0.38 GFF2523 Peptide chain release factor N(5)-glutamine methyltransferase (EC 2.1.1.297) 0.82 110
Bosea sp. OAE506 0.66 ABIE41_RS22540 tartrate dehydrogenase 0.21 ABIE41_RS23805 peptide chain release factor N(5)-glutamine methyltransferase low > 77
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS02600 tartrate dehydrogenase 0.46 RR42_RS18480 SAM-dependent methyltransferase
Dickeya dadantii 3937 0.66 DDA3937_RS04645 tartrate dehydrogenase 0.35 DDA3937_RS10985 peptide chain release factor N(5)-glutamine methyltransferase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF3852 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.35 GFF1267 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 low > 90
Dickeya dianthicola ME23 0.66 DZA65_RS04525 tartrate dehydrogenase 0.36 DZA65_RS11395 peptide chain release factor N(5)-glutamine methyltransferase low > 75
Pantoea sp. MT58 0.65 IAI47_17525 tartrate dehydrogenase 0.32 IAI47_11265 peptide chain release factor N(5)-glutamine methyltransferase
Dickeya dianthicola 67-19 0.65 HGI48_RS04605 tartrate dehydrogenase 0.37 HGI48_RS10935 peptide chain release factor N(5)-glutamine methyltransferase
Phaeobacter inhibens DSM 17395 0.52 PGA1_c17990 D-malate dehydrogenase 0.27 PGA1_c19880 methyltransferase, HemK family
Marinobacter adhaerens HP15 0.38 HP15_817 3-isopropylmalate dehydrogenase 0.35 HP15_713 modification methylase, HemK family
Lysobacter sp. OAE881 0.31 ABIE51_RS14200 isocitrate dehydrogenase 0.37 ABIE51_RS05490 peptide chain release factor N(5)-glutamine methyltransferase
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.4057.1 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) 0.35 Xcc-8004.4220.1 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2
Shewanella loihica PV-4 0.30 Shew_2760 isocitrate dehydrogenase (RefSeq) 0.33 Shew_2911 HemK family modification methylase (RefSeq)
Shewanella sp. ANA-3 0.30 Shewana3_2890 isocitrate dehydrogenase (RefSeq) 0.33 Shewana3_0770 HemK family modification methylase (RefSeq)
Alteromonas macleodii MIT1002 0.30 MIT1002_00983 Isocitrate dehydrogenase [NADP] 0.36 MIT1002_01515 Release factor glutamine methyltransferase low > 70
Shewanella amazonensis SB2B 0.29 Sama_2423 isocitrate dehydrogenase (RefSeq) 0.33 Sama_2565 hemK family protein (RefSeq)
Shewanella oneidensis MR-1 0.29 SO1538 isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) 0.33 SO3832 hemK family protein (NCBI ptt file)
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS00740 isocitrate dehydrogenase 0.40 ABZR86_RS19370 peptide chain release factor N(5)-glutamine methyltransferase
Rhodanobacter denitrificans MT42 0.28 LRK55_RS14765 isocitrate dehydrogenase 0.35 LRK55_RS12145 peptide chain release factor N(5)-glutamine methyltransferase
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS15050 isocitrate dehydrogenase 0.35 LRK54_RS12410 peptide chain release factor N(5)-glutamine methyltransferase
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_03810 leuB isocitrate dehydrogenase 0.40 OKGIIK_02015 Release factor glutamine methyltransferase
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_17775 isocitrate dehydrogenase 0.21 CA264_17895 protein-(glutamine-N5) methyltransferase, release factor-specific

Not shown: 4 genomes with orthologs for BPHYT_RS30235 only; 35 genomes with orthologs for BPHYT_RS17520 only