Conservation of cofitness between BPHYT_RS16490 and BPHYT_RS14910 in Burkholderia phytofirmans PsJN

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16490 glycerol-3-phosphate dehydrogenase 1.0 BPHYT_RS14910 chorismate mutase 0.29 19
Paraburkholderia bryophila 376MFSha3.1 0.91 H281DRAFT_04228 homodimeric glycerol 3-phosphate dehydrogenase (quinone) 0.93 H281DRAFT_03925 chorismate mutase low > 103
Paraburkholderia graminis OAS925 0.90 ABIE53_003468 glycerol-3-phosphate dehydrogenase 0.93 ABIE53_003157 chorismate mutase/prephenate dehydratase low > 113
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS02235 glycerol-3-phosphate dehydrogenase 0.89 QEN71_RS04070 prephenate dehydratase — —
Variovorax sp. SCN45 0.60 GFF2677 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.50 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 127
Variovorax sp. OAS795 0.58 ABID97_RS19955 glycerol-3-phosphate dehydrogenase 0.50 ABID97_RS09515 prephenate dehydratase — —
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS04840 glycerol-3-phosphate dehydrogenase 0.61 HSERO_RS18430 chorismate mutase — —
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS03020 glycerol-3-phosphate dehydrogenase 0.62 ABZR87_RS09450 prephenate dehydratase low > 80
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS20025 glycerol-3-phosphate dehydrogenase 0.44 ABZR86_RS02225 prephenate dehydratase low > 74
Ralstonia solanacearum PSI07 0.55 RPSI07_RS09885 glycerol-3-phosphate dehydrogenase 0.61 RPSI07_RS19710 prephenate dehydratase low > 81
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.471.1 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.43 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 74
Ralstonia solanacearum GMI1000 0.54 RS_RS15300 glycerol-3-phosphate dehydrogenase 0.62 RS_RS04495 prephenate dehydratase low > 80
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS07360 glycerol-3-phosphate dehydrogenase 0.60 RALBFv3_RS13760 chorismate mutase low > 76
Ralstonia solanacearum UW163 0.54 UW163_RS06260 glycerol-3-phosphate dehydrogenase 0.60 UW163_RS16050 chorismate mutase — —
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_3907 homodimeric glycerol 3-phosphate dehydrogenase (quinone) 0.46 Psyr_3645 prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_3907 homodimeric glycerol 3-phosphate dehydrogenase (quinone) 0.46 Psyr_3645 prephenate dehydratase — —
Pseudomonas sp. RS175 0.49 PFR28_03370 Aerobic glycerol-3-phosphate dehydrogenase 0.46 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_18235 glycerol-3-phosphate dehydrogenase 0.46 AO356_03465 prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_04190 glycerol-3-phosphate dehydrogenase 0.46 AO353_02070 prephenate dehydratase low > 101
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_769 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.46 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 87
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_5572 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.46 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas simiae WCS417 0.48 PS417_05565 glycerol-3-phosphate dehydrogenase 0.46 PS417_08125 prephenate dehydratase — —
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_1732 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.46 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS05650 glycerol-3-phosphate dehydrogenase 0.46 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas fluorescens SBW25 0.48 PFLU_RS05650 glycerol-3-phosphate dehydrogenase 0.46 PFLU_RS08095 prephenate dehydratase — —
Marinobacter adhaerens HP15 0.48 HP15_2168 FAD dependent oxidoreductase 0.46 HP15_1362 chorismate mutase / prephenate dehydratase — —
Pseudomonas sp. S08-1 0.48 OH686_20360 Aerobic glycerol-3-phosphate dehydrogenase 0.45 OH686_20870 Chorismate mutase I / Prephenate dehydratase — —
Pseudomonas putida KT2440 0.48 PP_1073 glycerol-3-phosphate dehydrogenase (aerobic) 0.47 PP_1769 chorismate mutase/Prephenate dehydratase — —
Pseudomonas stutzeri RCH2 0.47 Psest_2775 Glycerol-3-phosphate dehydrogenase 0.45 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 — —
Alteromonas macleodii MIT1002 0.47 MIT1002_00200 Aerobic glycerol-3-phosphate dehydrogenase 0.26 MIT1002_01316 P-protein — —
Dickeya dadantii 3937 0.45 DDA3937_RS19720 glycerol-3-phosphate dehydrogenase 0.25 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase — —
Dickeya dianthicola 67-19 0.44 HGI48_RS19815 glycerol-3-phosphate dehydrogenase 0.25 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase 0.65 26
Rahnella sp. WP5 0.44 EX31_RS05000 glycerol-3-phosphate dehydrogenase 0.22 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase low > 89
Dickeya dianthicola ME23 0.44 DZA65_RS20905 glycerol-3-phosphate dehydrogenase 0.25 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase low > 75
Serratia liquefaciens MT49 0.44 IAI46_23915 glycerol-3-phosphate dehydrogenase 0.22 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase low > 86
Pectobacterium carotovorum WPP14 0.44 HER17_RS01510 glycerol-3-phosphate dehydrogenase 0.24 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase — —
Pantoea sp. MT58 0.43 IAI47_01750 glycerol-3-phosphate dehydrogenase 0.24 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase low > 76
Erwinia tracheiphila SCR3 0.43 LU632_RS23020 glpD glycerol-3-phosphate dehydrogenase 0.25 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli BL21 0.43 ECD_03277 sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding 0.26 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_00278 Aerobic glycerol-3-phosphate dehydrogenase 0.26 OHPLBJKB_01109 P-protein low > 73
Escherichia coli BW25113 0.43 b3426 glpD sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) 0.26 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) low > 76
Escherichia coli ECOR27 0.43 NOLOHH_08720 glpD glycerol-3-phosphate dehydrogenase 0.27 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase low > 75
Escherichia coli ECRC101 0.43 MCAODC_07455 glpD glycerol-3-phosphate dehydrogenase 0.26 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase low > 87
Escherichia coli ECRC102 0.43 NIAGMN_14695 glpD glycerol-3-phosphate dehydrogenase 0.26 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC62 0.43 BNILDI_02795 glpD glycerol-3-phosphate dehydrogenase 0.27 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase low > 75
Escherichia coli ECRC99 0.43 KEDOAH_11215 glpD glycerol-3-phosphate dehydrogenase 0.26 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECOR38 0.43 HEPCGN_15745 glpD glycerol-3-phosphate dehydrogenase 0.27 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase low > 87
Escherichia coli ECRC98 0.43 JDDGAC_20555 glpD glycerol-3-phosphate dehydrogenase 0.26 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase low > 86
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4120 Glycerol-3-phosphate dehydrogenase 0.26 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) low > 76
Escherichia coli ECRC100 0.43 OKFHMN_16925 glpD glycerol-3-phosphate dehydrogenase 0.26 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase low > 80
Escherichia coli Nissle 1917 0.42 ECOLIN_RS19555 glycerol-3-phosphate dehydrogenase 0.27 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase low > 55
Escherichia fergusonii Becca 0.42 EFB2_00403 Aerobic glycerol-3-phosphate dehydrogenase 0.27 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase low > 86
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_17495 glycerol-3-phosphate dehydrogenase 0.27 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase low > 62
Enterobacter sp. TBS_079 0.41 MPMX20_04309 Aerobic glycerol-3-phosphate dehydrogenase 0.25 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF587 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.23 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 78
Klebsiella michiganensis M5al 0.41 BWI76_RS26190 glycerol-3-phosphate dehydrogenase 0.25 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase low > 92
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_0811 FAD dependent oxidoreductase (RefSeq) 0.35 DvMF_1749 prephenate dehydratase (RefSeq) low > 51
Acidovorax sp. GW101-3H11 0.19 Ac3H11_797 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.51 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Desulfovibrio vulgaris Hildenborough JW710 0.18 DVU3132 glycerol-3-phosphate dehydrogenase, FAD-dependent (TIGR) 0.35 DVU0462 chorismate mutase/prephenate dehydratase (TIGR) low > 55
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF2815 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.50 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 90
Cupriavidus basilensis FW507-4G11 0.17 RR42_RS13815 FAD-dependent oxidoreductase 0.65 RR42_RS04460 chorismate mutase — —
Castellaniella sp019104865 MT123 0.17 ABCV34_RS05860 glycerol-3-phosphate dehydrogenase/oxidase 0.55 ABCV34_RS07110 prephenate dehydratase — —
Rhodanobacter denitrificans FW104-10B01 0.16 LRK54_RS15405 glycerol-3-phosphate dehydrogenase/oxidase 0.44 LRK54_RS00395 prephenate dehydratase low > 59
Rhodanobacter denitrificans MT42 0.16 LRK55_RS15125 glycerol-3-phosphate dehydrogenase/oxidase 0.44 LRK55_RS00135 prephenate dehydratase low > 63

Not shown: 12 genomes with orthologs for BPHYT_RS16490 only; 5 genomes with orthologs for BPHYT_RS14910 only