Conservation of cofitness between BPHYT_RS02150 and BPHYT_RS04870 in Burkholderia phytofirmans PsJN

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS02150 biotin synthase 1.0 BPHYT_RS04870 cobalamin synthase 0.29 5
Paraburkholderia bryophila 376MFSha3.1 0.91 H281DRAFT_02097 biotin synthase 0.83 H281DRAFT_00140 cobalamin-5'-phosphate synthase low > 103
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS01085 biotin synthase BioB 0.83 QEN71_RS25125 adenosylcobinamide-GDP ribazoletransferase — —
Ralstonia solanacearum PSI07 0.71 RPSI07_RS22850 biotin synthase BioB 0.45 RPSI07_RS12895 adenosylcobinamide-GDP ribazoletransferase low > 81
Ralstonia solanacearum GMI1000 0.70 RS_RS01305 biotin synthase 0.43 RS_RS12030 adenosylcobinamide-GDP ribazoletransferase low > 80
Ralstonia solanacearum UW163 0.70 UW163_RS03115 biotin synthase BioB 0.43 UW163_RS09195 adenosylcobinamide-GDP ribazoletransferase — —
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS10465 biotin synthase BioB 0.43 RALBFv3_RS04475 adenosylcobinamide-GDP ribazoletransferase low > 76
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS06265 biotin synthase BioB 0.48 ABZR87_RS00070 adenosylcobinamide-GDP ribazoletransferase low > 80
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS00940 biotin synthase 0.55 RR42_RS16115 cobalamin synthase low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF3992 Biotin synthase (EC 2.8.1.6) 0.30 GFF4000 Cobalamin synthase low > 90
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS15840 biotin synthase BioB 0.14 ABZR86_RS10880 adenosylcobinamide-GDP ribazoletransferase low > 74
Acidovorax sp. GW101-3H11 0.57 Ac3H11_2272 Biotin synthase (EC 2.8.1.6) 0.23 Ac3H11_2041 Cobalamin synthase low > 79
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_05645 biotin synthase 0.33 CSW01_06265 adenosylcobinamide-GDP ribazoletransferase low > 62
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS12235 biotin synthase 0.36 HSERO_RS09775 cobalamin synthase low > 78
Escherichia coli ECRC101 0.57 MCAODC_25615 bioB biotin synthase BioB 0.20 MCAODC_20260 cobS adenosylcobinamide-GDP ribazoletransferase low > 87
Escherichia coli ECRC100 0.57 OKFHMN_06400 bioB biotin synthase BioB 0.20 OKFHMN_25130 cobS adenosylcobinamide-GDP ribazoletransferase low > 80
Escherichia coli ECRC98 0.57 JDDGAC_10035 bioB biotin synthase BioB 0.20 JDDGAC_29260 cobS adenosylcobinamide-GDP ribazoletransferase low > 86
Escherichia coli ECRC99 0.57 KEDOAH_21510 bioB biotin synthase BioB 0.20 KEDOAH_02980 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli ECRC102 0.57 NIAGMN_04445 bioB biotin synthase BioB 0.20 NIAGMN_22635 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli ECOR27 0.56 NOLOHH_22770 bioB biotin synthase BioB 0.19 NOLOHH_16040 cobS adenosylcobinamide-GDP ribazoletransferase low > 75
Lysobacter sp. OAE881 0.56 ABIE51_RS01140 biotin synthase BioB 0.16 ABIE51_RS04985 adenosylcobinamide-GDP ribazoletransferase low > 62
Escherichia coli ECOR38 0.56 HEPCGN_01640 bioB biotin synthase BioB 0.19 HEPCGN_03465 cobS adenosylcobinamide-GDP ribazoletransferase low > 87
Escherichia coli ECRC62 0.56 BNILDI_21040 bioB biotin synthase BioB 0.20 BNILDI_14870 cobS adenosylcobinamide-GDP ribazoletransferase low > 75
Pseudomonas fluorescens SBW25 0.56 PFLU_RS27650 biotin synthase BioB 0.13 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase low > 109
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4687 biotin synthase 0.12 Psyr_3672 cobalamin-5'-phosphate synthase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_02938 Biotin synthase 0.19 OHPLBJKB_01716 Adenosylcobinamide-GDP ribazoletransferase low > 73
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4687 biotin synthase 0.12 Psyr_3672 cobalamin-5'-phosphate synthase low > 86
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS27650 biotin synthase BioB 0.13 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.34 55
Escherichia coli BL21 0.56 ECD_00742 biotin synthase 0.20 ECD_01901 cobalamin synthase 0.35 41
Escherichia coli BW25113 0.56 b0775 bioB biotin synthase (NCBI) 0.20 b1992 cobS cobalamin synthase (NCBI) low > 76
Klebsiella michiganensis M5al 0.56 BWI76_RS08760 biotin synthase 0.17 BWI76_RS18750 adenosylcobinamide-GDP ribazoletransferase — —
Shewanella amazonensis SB2B 0.56 Sama_1438 biotin synthase (RefSeq) 0.32 Sama_0763 cobalamin 5'-phosphate synthase (RefSeq) — —
Escherichia fergusonii Becca 0.56 EFB2_03330 Biotin synthase 0.19 EFB2_01897 Adenosylcobinamide-GDP ribazoletransferase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.505.1 Biotin synthase (EC 2.8.1.6) 0.10 Xcc-8004.1400.1 Cobalamin synthase (EC 2.7.8.26) low > 74
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_14135 biotin synthase 0.12 AO356_19180 cobalamin synthase low > 104
Escherichia coli Nissle 1917 0.56 ECOLIN_RS04130 biotin synthase BioB 0.19 ECOLIN_RS11625 adenosylcobinamide-GDP ribazoletransferase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF671 Biotin synthase (EC 2.8.1.6) 0.18 GFF3968 Cobalamin synthase (EC 2.7.8.26) low > 78
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) 0.10 Pf6N2E2_5746 Cobalamin synthase low > 103
Variovorax sp. SCN45 0.56 GFF937 Biotin synthase (EC 2.8.1.6) 0.27 GFF424 Cobalamin synthase (EC 2.7.8.26) low > 127
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_07525 biotin synthase 0.11 AO353_02595 cobalamin synthase low > 101
Pseudomonas simiae WCS417 0.56 PS417_26005 biotin synthase 0.13 PS417_20020 cobalamin synthase low > 88
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) 0.11 Pf1N1B4_3715 Cobalamin synthase 0.45 72
Pseudomonas sp. RS175 0.56 PFR28_04103 Biotin synthase 0.17 PFR28_03200 Adenosylcobinamide-GDP ribazoletransferase 0.28 80
Dechlorosoma suillum PS 0.56 Dsui_1297 biotin synthetase 0.36 Dsui_0471 cobalamin 5''-phosphate synthase/cobalamin synthase low > 51
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) 0.13 PfGW456L13_4234 Cobalamin synthase low > 87
Variovorax sp. OAS795 0.55 ABID97_RS13955 biotin synthase BioB 0.29 ABID97_RS17330 adenosylcobinamide-GDP ribazoletransferase low > 91
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_13650 bioB biotin synthase BioB 0.11 OKGIIK_05520 adenosylcobinamide-GDP ribazoletransferase low > 52
Rahnella sp. WP5 0.55 EX31_RS23695 biotin synthase BioB 0.20 EX31_RS09930 adenosylcobinamide-GDP ribazoletransferase low > 89
Shewanella oneidensis MR-1 0.55 SO2740 bioB biotin synthase (NCBI ptt file) 0.40 SO1036 cobS cobalamin 5'-phosphate synthase (NCBI ptt file) — —
Shewanella loihica PV-4 0.55 Shew_1719 biotin synthase (RefSeq) 0.39 Shew_0715 cobalamin 5'-phosphate synthase (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.55 AMB_RS13865 biotin synthase 0.13 AMB_RS02800 adenosylcobinamide-GDP ribazoletransferase — —
Shewanella sp. ANA-3 0.54 Shewana3_2519 biotin synthase (RefSeq) 0.37 Shewana3_3277 cobS cobalamin synthase (RefSeq) low > 73
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_3989 biotin synthase (EC 2.8.1.6) 0.15 Ga0059261_0627 cobalamin-5'-phosphate synthase (EC 2.7.8.26) low > 68
Acinetobacter radioresistens SK82 0.52 MPMX26_01785 Biotin synthase 0.11 MPMX26_01610 Adenosylcobinamide-GDP ribazoletransferase — —
Agrobacterium fabrum C58 0.52 Atu3997 biotin synthetase 0.19 Atu1891 cobalamin biosynthesis protein low > 89
Phaeobacter inhibens DSM 17395 0.51 PGA1_c09120 biotin synthase BioB 0.17 PGA1_c07560 putative cobalamin-5-phosphate synthase — —
Rhodopseudomonas palustris CGA009 0.51 TX73_010535 biotin synthase BioB 0.22 TX73_010795 adenosylcobinamide-GDP ribazoletransferase low > 86
Rhizobium sp. OAE497 0.49 ABIE40_RS21075 biotin synthase BioB 0.18 ABIE40_RS10725 adenosylcobinamide-GDP ribazoletransferase low > 107
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_2566 biotin synthetase 0.34 Echvi_3760 Cobalamin-5-phosphate synthase low > 79
Fusobacterium nucleatum SB010 0.23 HUW76_05115 biotin synthase BioB 0.18 HUW76_05620 adenosylcobinamide-GDP ribazoletransferase low > 35
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS15300 biotin synthase BioB 0.25 HMPREF1078_RS17675 adenosylcobinamide-GDP ribazoletransferase low > 61

Not shown: 30 genomes with orthologs for BPHYT_RS02150 only; 10 genomes with orthologs for BPHYT_RS04870 only