| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS13220 | | phosphomethylpyrimidine synthase | 1.0 | BPHYT_RS04725 | | sulfite reductase | 0.68 | 18 |
| Paraburkholderia graminis OAS925 | 0.99 | ABIE53_002857 | | phosphomethylpyrimidine synthase | 0.95 | ABIE53_001226 | | sulfite reductase (NADPH) hemoprotein beta-component | 0.76 | 4 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.98 | H281DRAFT_00395 | | hydroxymethylpyrimidine synthase | 0.96 | H281DRAFT_00114 | | sulfite reductase (NADPH) beta subunit | 0.62 | 6 |
| Paraburkholderia sabiae LMG 24235 | 0.95 | QEN71_RS05480 | | phosphomethylpyrimidine synthase ThiC | 0.93 | QEN71_RS25255 | | nitrite/sulfite reductase | 0.82 | 22 |
| Herbaspirillum seropedicae SmR1 | 0.85 | HSERO_RS02120 | | phosphomethylpyrimidine synthase ThiC | 0.70 | HSERO_RS15550 | | sulfite reductase | low | > 78 |
| Dechlorosoma suillum PS | 0.85 | Dsui_0422 | | thiamine biosynthesis protein ThiC | 0.67 | Dsui_1986 | | sulfite reductase, beta subunit (hemoprotein) | — | — |
| Marinobacter adhaerens HP15 | 0.75 | HP15_453 | | thiamine biosynthesis protein thiC | 0.59 | HP15_1795 | | sulfite reductase hemoprotein, beta subunit | low | > 73 |
| Pseudomonas putida KT2440 | 0.75 | PP_4922 | | Phosphomethylpyrimidine synthase | 0.65 | PP_2371 | | Sulphite reductase hemoprotein, beta subunit | 0.29 | 86 |
| Pseudomonas sp. S08-1 | 0.74 | OH686_15885 | | phosphomethylpyrimidine synthase | 0.65 | OH686_03470 | | Sulfite reductase [NADPH] hemoprotein beta-component | low | > 80 |
| Rhodanobacter sp. FW510-T8 | 0.74 | OKGIIK_16965 | thiC | phosphomethylpyrimidine synthase ThiC | 0.06 | OKGIIK_05965 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 52 |
| Pseudomonas stutzeri RCH2 | 0.74 | Psest_0477 | | thiamine biosynthesis protein ThiC | 0.65 | Psest_2089 | | Sulfite reductase, beta subunit (hemoprotein) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.74 | Pf6N2E2_3644 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.66 | Pf6N2E2_2073 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.74 | AO353_13010 | | thiamine biosynthesis protein ThiC | 0.68 | AO353_22865 | | sulfite reductase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.74 | AO356_08810 | | thiamine biosynthesis protein ThiC | 0.66 | AO356_00555 | | sulfite reductase | low | > 104 |
| Pseudomonas sp. RS175 | 0.74 | PFR28_05091 | | Phosphomethylpyrimidine synthase | 0.66 | PFR28_01366 | | Sulfite reductase [ferredoxin] | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.73 | Pf1N1B4_1447 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.67 | Pf1N1B4_4656 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.73 | PfGW456L13_187 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.66 | PfGW456L13_3285 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.73 | PFLU_RS02430 | | phosphomethylpyrimidine synthase ThiC | 0.65 | PFLU_RS12980 | | nitrite/sulfite reductase | 0.30 | 71 |
| Pseudomonas fluorescens SBW25 | 0.73 | PFLU_RS02430 | | phosphomethylpyrimidine synthase ThiC | 0.65 | PFLU_RS12980 | | nitrite/sulfite reductase | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.73 | Psyr_0544 | | hydroxymethylpyrimidine synthase | 0.67 | Psyr_2462 | | Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region | 0.61 | 28 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.73 | Psyr_0544 | | hydroxymethylpyrimidine synthase | 0.67 | Psyr_2462 | | Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region | low | > 86 |
| Pseudomonas simiae WCS417 | 0.73 | PS417_02355 | | thiamine biosynthesis protein ThiC | 0.65 | PS417_12290 | | sulfite reductase | low | > 88 |
| Acinetobacter radioresistens SK82 | 0.71 | MPMX26_00180 | | Phosphomethylpyrimidine synthase | 0.57 | MPMX26_00614 | | Sulfite reductase [ferredoxin] | low | > 36 |
| Ralstonia solanacearum PSI07 | 0.69 | RPSI07_RS23420 | | phosphomethylpyrimidine synthase ThiC | 0.74 | RPSI07_RS12775 | | nitrite/sulfite reductase | low | > 81 |
| Shewanella loihica PV-4 | 0.69 | Shew_2096 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.07 | Shew_0666 | | sulfite reductase subunit beta (RefSeq) | low | > 60 |
| Ralstonia sp. UNC404CL21Col | 0.68 | ABZR87_RS04785 | | phosphomethylpyrimidine synthase ThiC | 0.74 | ABZR87_RS00210 | | nitrite/sulfite reductase | 0.63 | 14 |
| Cupriavidus basilensis FW507-4G11 | 0.68 | RR42_RS01290 | | thiamine biosynthesis protein ThiC | 0.75 | RR42_RS16270 | | sulfite reductase | 0.86 | 4 |
| Ralstonia solanacearum IBSBF1503 | 0.68 | RALBFv3_RS09940 | | phosphomethylpyrimidine synthase ThiC | 0.74 | RALBFv3_RS04600 | | sulfite reductase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.68 | UW163_RS03640 | | phosphomethylpyrimidine synthase ThiC | 0.74 | UW163_RS09070 | | sulfite reductase | — | — |
| Rahnella sp. WP5 | 0.68 | EX31_RS16815 | | phosphomethylpyrimidine synthase ThiC | 0.06 | EX31_RS07900 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 89 |
| Ralstonia solanacearum GMI1000 | 0.68 | RS_RS00555 | | phosphomethylpyrimidine synthase | 0.74 | RS_RS12170 | | nitrite/sulfite reductase | low | > 80 |
| Serratia liquefaciens MT49 | 0.67 | IAI46_01320 | | phosphomethylpyrimidine synthase ThiC | 0.06 | IAI46_03690 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 86 |
| Escherichia coli BW25113 | 0.67 | b3994 | thiC | thiamine biosynthesis protein ThiC (NCBI) | 0.07 | b2763 | cysI | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.67 | ECD_03871 | | phosphomethylpyrimidine synthase | 0.07 | ECD_02608 | | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding | 0.51 | 47 |
| Dickeya dadantii 3937 | 0.67 | DDA3937_RS01175 | | phosphomethylpyrimidine synthase ThiC | 0.07 | DDA3937_RS16940 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.76 | 34 |
| Shewanella oneidensis MR-1 | 0.67 | SO2445 | thiC | thiamin biosynthesis protein ThiC (NCBI ptt file) | 0.08 | SO3737 | cysI | sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) | 0.21 | 63 |
| Alteromonas macleodii MIT1002 | 0.66 | MIT1002_00097 | | Phosphomethylpyrimidine synthase | 0.07 | MIT1002_03379 | | Sulfite reductase [NADPH] hemoprotein beta-component | — | — |
| Shewanella sp. ANA-3 | 0.66 | Shewana3_1936 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.08 | Shewana3_0856 | | sulfite reductase subunit beta (RefSeq) | low | > 73 |
| Dickeya dianthicola ME23 | 0.66 | DZA65_RS01215 | | phosphomethylpyrimidine synthase ThiC | 0.06 | DZA65_RS18085 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.70 | 49 |
| Dickeya dianthicola 67-19 | 0.66 | HGI48_RS01170 | | phosphomethylpyrimidine synthase ThiC | 0.06 | HGI48_RS17010 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.89 | 5 |
| Azospirillum brasilense Sp245 | 0.64 | AZOBR_RS07940 | | phosphomethylpyrimidine synthase | 0.57 | AZOBR_RS10125 | | sulfite reductase | 0.58 | 9 |
| Phaeobacter inhibens DSM 17395 | 0.62 | PGA1_c09110 | | thiamine biosynthesis protein ThiC | 0.47 | PGA1_c20760 | | putative nitrite/sulfite reductase | — | — |
| Sinorhizobium meliloti 1021 | 0.62 | SM_b20615 | | thiamine biosynthesis protein ThiC | 0.54 | SMc02124 | | nitrite reductase | low | > 103 |
| Sphingomonas koreensis DSMZ 15582 | 0.62 | Ga0059261_2424 | | hydroxymethylpyrimidine synthase | 0.55 | Ga0059261_1498 | | Sulfite reductase, beta subunit (hemoprotein) | low | > 68 |
| Dinoroseobacter shibae DFL-12 | 0.62 | Dshi_4080 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.48 | Dshi_1153 | | nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein (RefSeq) | — | — |
| Agrobacterium fabrum C58 | 0.62 | Atu2569 | | thiamine biosynthesis protein | 0.55 | Atu1456 | | sulfite reductase (NADPH) hemoprotein beta-component | 0.71 | 30 |
| Caulobacter crescentus NA1000 | 0.61 | CCNA_02109 | | thiamine biosynthesis protein thiC | 0.55 | CCNA_01177 | | sulfite reductase, beta subunit | 0.76 | 27 |
| Caulobacter crescentus NA1000 Δfur | 0.61 | CCNA_02109 | | thiamine biosynthesis protein thiC | 0.55 | CCNA_01177 | | sulfite reductase, beta subunit | low | > 67 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.60 | A4249_RS15715 | | phosphomethylpyrimidine synthase ThiC | 0.52 | A4249_RS09665 | | nitrite/sulfite reductase | 0.86 | 47 |
| Bosea sp. OAE506 | 0.60 | ABIE41_RS02770 | | phosphomethylpyrimidine synthase ThiC | 0.54 | ABIE41_RS15335 | | nitrite/sulfite reductase | low | > 77 |
| Rhodopseudomonas palustris CGA009 | 0.60 | TX73_018540 | | phosphomethylpyrimidine synthase ThiC | 0.55 | TX73_021840 | | nitrite/sulfite reductase | low | > 86 |
| Azospirillum sp. SherDot2 | 0.60 | MPMX19_00336 | | Phosphomethylpyrimidine synthase | 0.55 | MPMX19_00652 | | Sulfite reductase [ferredoxin] | low | > 112 |
| Rhodospirillum rubrum S1H | 0.57 | Rru_A2008 | | Thiamine biosynthesis protein ThiC (NCBI) | 0.55 | Rru_A1931 | | Ferredoxin--nitrite reductase (NCBI) | — | — |
| Mycobacterium tuberculosis H37Rv | 0.51 | Rv0423c | | Probable thiamine biosynthesis protein ThiC | 0.14 | Rv2391 | | Ferredoxin-dependent sulfite reductase SirA | — | — |
Not shown: 40 genomes with orthologs for BPHYT_RS13220 only; 3 genomes with orthologs for BPHYT_RS04725 only