Conservation of cofitness between BPHYT_RS16835 and BPHYT_RS02590 in Burkholderia phytofirmans PsJN

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16835 glyceraldehyde-3-phosphate dehydrogenase 1.0 BPHYT_RS02590 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 0.93 1
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_06315 glyceraldehyde-3-phosphate dehydrogenase (NAD+) 0.93 H281DRAFT_02004 phosphoglycerate mutase 0.53 2
Paraburkholderia graminis OAS925 0.99 ABIE53_003536 glyceraldehyde 3-phosphate dehydrogenase 0.93 ABIE53_000663 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 0.93 1
Paraburkholderia sabiae LMG 24235 0.96 QEN71_RS27005 type I glyceraldehyde-3-phosphate dehydrogenase 0.91 QEN71_RS01445 2,3-diphosphoglycerate-dependent phosphoglycerate mutase 0.81 1
Herbaspirillum seropedicae SmR1 0.89 HSERO_RS07125 glyceraldehyde-3-phosphate dehydrogenase 0.77 HSERO_RS00820 phosphoglyceromutase
Castellaniella sp019104865 MT123 0.87 ABCV34_RS15455 type I glyceraldehyde-3-phosphate dehydrogenase 0.69 ABCV34_RS14270 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Dyella japonica UNC79MFTsu3.2 0.76 ABZR86_RS18615 type I glyceraldehyde-3-phosphate dehydrogenase 0.70 ABZR86_RS13515 2,3-diphosphoglycerate-dependent phosphoglycerate mutase 0.88 1
Sinorhizobium meliloti 1021 0.62 SMc03979 glyceraldehyde-3-phosphate dehydrogenase 0.37 SMc02838 phosphoglyceromutase 0.61 91
Sphingomonas koreensis DSMZ 15582 0.60 Ga0059261_0730 glyceraldehyde-3-phosphate dehydrogenase, type I 0.51 Ga0059261_3169 phosphoglycerate mutase, BPG-dependent, family 1
Rhizobium sp. OAE497 0.60 ABIE40_RS15870 type I glyceraldehyde-3-phosphate dehydrogenase 0.36 ABIE40_RS00580 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Azospirillum brasilense Sp245 0.59 AZOBR_RS10375 glyceraldehyde-3-phosphate dehydrogenase 0.51 AZOBR_RS19425 phosphoglyceromutase low > 97
Azospirillum sp. SherDot2 0.59 MPMX19_02850 Glyceraldehyde-3-phosphate dehydrogenase 1 0.54 MPMX19_04192 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS10040 type I glyceraldehyde-3-phosphate dehydrogenase 0.48 A4249_RS15385 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Caulobacter crescentus NA1000 0.56 CCNA_03358 glyceraldehyde 3-phosphate dehydrogenase 0.48 CCNA_02344 phosphoglycerate mutase
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_03358 glyceraldehyde 3-phosphate dehydrogenase 0.48 CCNA_02344 phosphoglycerate mutase low > 67
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF3022 D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) 0.66 GFF648 Phosphoglycerate mutase (EC 5.4.2.1) low > 78
Escherichia coli ECRC99 0.55 KEDOAH_08755 epd erythrose-4-phosphate dehydrogenase 0.66 KEDOAH_21230 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Escherichia coli ECRC100 0.55 OKFHMN_19385 epd erythrose-4-phosphate dehydrogenase 0.66 OKFHMN_06735 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 80
Escherichia coli ECRC101 0.55 MCAODC_09905 epd erythrose-4-phosphate dehydrogenase 0.66 MCAODC_25955 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase 0.42 44
Escherichia coli BW25113 0.55 b2927 epd D-erythrose 4-phosphate dehydrogenase (NCBI) 0.66 b0755 gpmA phosphoglyceromutase (NCBI) 0.29 48
Escherichia coli ECOR27 0.55 NOLOHH_11295 epd erythrose-4-phosphate dehydrogenase 0.66 NOLOHH_23165 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 75
Escherichia coli ECRC102 0.55 NIAGMN_17150 epd erythrose-4-phosphate dehydrogenase 0.66 NIAGMN_04785 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Escherichia coli ECRC98 0.55 JDDGAC_23015 epd erythrose-4-phosphate dehydrogenase 0.66 JDDGAC_10390 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 86
Escherichia coli BL21 0.55 ECD_02758 D-erythrose 4-phosphate dehydrogenase 0.66 ECD_00708 phosphoglyceromutase 1 low > 61
Escherichia coli Nissle 1917 0.55 ECOLIN_RS16265 erythrose-4-phosphate dehydrogenase 0.66 ECOLIN_RS04020 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 55
Escherichia coli ECRC62 0.55 BNILDI_09835 epd erythrose-4-phosphate dehydrogenase 0.66 BNILDI_21160 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_00789 D-erythrose-4-phosphate dehydrogenase 0.66 OHPLBJKB_02958 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 0.34 54
Pantoea sp. MT58 0.55 IAI47_03685 erythrose-4-phosphate dehydrogenase 0.66 IAI47_13600 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Escherichia fergusonii Becca 0.54 EFB2_00979 D-erythrose-4-phosphate dehydrogenase 0.66 EFB2_03351 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase low > 86
Escherichia coli ECOR38 0.54 HEPCGN_18695 epd erythrose-4-phosphate dehydrogenase 0.66 HEPCGN_01540 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 87
Fusobacterium nucleatum SB010 0.54 HUW76_06235 type I glyceraldehyde-3-phosphate dehydrogenase 0.55 HUW76_04490 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Klebsiella michiganensis M5al 0.54 BWI76_RS23985 erythrose-4-phosphate dehydrogenase 0.64 BWI76_RS08605 phosphoglyceromutase low > 92
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2973 erythrose-4-phosphate dehydrogenase 0.64 EX28DRAFT_2240 phosphoglycerate mutase, BPG-dependent, family 1 low > 76
Enterobacter sp. TBS_079 0.53 MPMX20_03779 D-erythrose-4-phosphate dehydrogenase 0.65 MPMX20_01382 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase low > 85
Serratia liquefaciens MT49 0.53 IAI46_21015 erythrose-4-phosphate dehydrogenase 0.64 IAI46_06410 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Rahnella sp. WP5 0.52 EX31_RS21405 erythrose-4-phosphate dehydrogenase 0.62 EX31_RS23555 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Pectobacterium carotovorum WPP14 0.52 HER17_RS02685 erythrose-4-phosphate dehydrogenase 0.64 HER17_RS14800 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Mycobacterium tuberculosis H37Rv 0.52 Rv1436 Probable glyceraldehyde 3-phosphate dehydrogenase Gap (GAPDH) 0.49 Rv0489 Probable phosphoglycerate mutase 1 Gpm1 (phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
Erwinia tracheiphila SCR3 0.52 LU632_RS05535 epd erythrose-4-phosphate dehydrogenase 0.65 LU632_RS15920 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Dickeya dadantii 3937 0.51 DDA3937_RS18520 erythrose-4-phosphate dehydrogenase 0.65 DDA3937_RS06570 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Dickeya dianthicola ME23 0.51 DZA65_RS19580 erythrose-4-phosphate dehydrogenase 0.64 DZA65_RS06965 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Dickeya dianthicola 67-19 0.51 HGI48_RS18445 erythrose-4-phosphate dehydrogenase 0.64 HGI48_RS06610 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Alteromonas macleodii MIT1002 0.51 MIT1002_00862 D-erythrose-4-phosphate dehydrogenase 0.63 MIT1002_00378 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Variovorax sp. SCN45 0.49 GFF7175 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.74 GFF2569 Phosphoglycerate mutase (EC 5.4.2.11)
Ralstonia solanacearum PSI07 0.49 RPSI07_RS11435 type I glyceraldehyde-3-phosphate dehydrogenase 0.78 RPSI07_RS22410 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS05865 type I glyceraldehyde-3-phosphate dehydrogenase 0.79 RALBFv3_RS10900 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Ralstonia solanacearum UW163 0.49 UW163_RS07760 type I glyceraldehyde-3-phosphate dehydrogenase 0.79 UW163_RS02680 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Variovorax sp. OAS795 0.49 ABID97_RS02440 type I glyceraldehyde-3-phosphate dehydrogenase 0.72 ABID97_RS07385 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Ralstonia solanacearum GMI1000 0.49 RS_RS13755 aldehyde dehydrogenase 0.79 RS_RS01740 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Desulfovibrio vulgaris Hildenborough JW710 0.49 DVU0565 gap-1 glyceraldehyde 3-phosphate dehydrogenase (TIGR) 0.53 DVU2935 gpm phosphoglycerate mutase (TIGR) low > 55
Rhodanobacter denitrificans MT42 0.49 LRK55_RS05540 type I glyceraldehyde-3-phosphate dehydrogenase 0.68 LRK55_RS09465 2,3-diphosphoglycerate-dependent phosphoglycerate mutase 0.79 5
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS05785 type I glyceraldehyde-3-phosphate dehydrogenase 0.68 LRK54_RS09805 2,3-diphosphoglycerate-dependent phosphoglycerate mutase 0.91 2
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS01435 type I glyceraldehyde-3-phosphate dehydrogenase 0.79 ABZR87_RS06750 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS17570 glyceraldehyde-3-phosphate dehydrogenase 0.80 RR42_RS01825 phosphoglyceromutase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS12470 type I glyceraldehyde-3-phosphate dehydrogenase 0.53 ABZR88_RS10100 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_01060 gap type I glyceraldehyde-3-phosphate dehydrogenase 0.68 OKGIIK_16060 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase 0.73 47
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.1236.1 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.57 Xcc-8004.1763.1 Phosphoglycerate mutase (EC 5.4.2.1) 0.50 4
Acidovorax sp. GW101-3H11 0.46 Ac3H11_648 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.73 Ac3H11_3856 Phosphoglycerate mutase (EC 5.4.2.1)
Desulfovibrio vulgaris Miyazaki F 0.46 DvMF_1440 glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) 0.54 DvMF_1462 phosphoglycerate mutase 1 family (RefSeq) low > 51
Bacteroides ovatus ATCC 8483 0.45 BACOVA_05096 glyceraldehyde-3-phosphate dehydrogenase, type I 0.59 BACOVA_04374 phosphoglycerate mutase 1 family
Parabacteroides merdae CL09T00C40 0.45 HMPREF1078_RS15885 type I glyceraldehyde-3-phosphate dehydrogenase 0.55 HMPREF1078_RS08205 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Phocaeicola dorei CL03T12C01 0.45 ABI39_RS17975 type I glyceraldehyde-3-phosphate dehydrogenase 0.59 ABI39_RS09585 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Phocaeicola vulgatus CL09T03C04 0.45 HMPREF1058_RS06050 type I glyceraldehyde-3-phosphate dehydrogenase 0.59 HMPREF1058_RS13980 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Bacteroides stercoris CC31F 0.45 HMPREF1181_RS06145 type I glyceraldehyde-3-phosphate dehydrogenase 0.55 HMPREF1181_RS13010 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Bacteroides thetaiotaomicron VPI-5482 0.45 BT4263 glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) 0.58 BT1660 phosphoglycerate mutase (NCBI ptt file)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF1114 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.73 GFF1226 Phosphoglycerate mutase (EC 5.4.2.1)
Bifidobacterium breve UCC2003 0.38 BBR_RS16790 type I glyceraldehyde-3-phosphate dehydrogenase 0.52 BBR_RS18590 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

Not shown: 35 genomes with orthologs for BPHYT_RS16835 only; 0 genomes with orthologs for BPHYT_RS02590 only