Conservation of cofitness between BNILDI_11900 and BNILDI_21485 in Escherichia coli ECRC62

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_11900 pdxJ pyridoxine 5'-phosphate synthase 1.0 BNILDI_21485 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 0.91 2
Escherichia coli ECRC98 1.00 JDDGAC_25090 pdxJ pyridoxine 5'-phosphate synthase 1.00 JDDGAC_10750 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
Escherichia coli ECRC100 1.00 OKFHMN_21425 pdxJ pyridoxine 5'-phosphate synthase 1.00 OKFHMN_07100 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) low > 80
Escherichia coli ECOR27 1.00 NOLOHH_13100 pdxJ pyridoxine 5'-phosphate synthase 1.00 NOLOHH_23480 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) low > 75
Escherichia coli BW25113 1.00 b2564 pdxJ pyridoxal phosphate biosynthetic protein (NCBI) 1.00 b0688 pgm phosphoglucomutase (NCBI) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_19195 pdxJ pyridoxine 5'-phosphate synthase 1.00 NIAGMN_05155 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
Escherichia coli ECRC101 1.00 MCAODC_11955 pdxJ pyridoxine 5'-phosphate synthase 1.00 MCAODC_26315 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) low > 87
Escherichia coli BL21 1.00 ECD_02458 pyridoxine 5'-phosphate synthase 1.00 ECD_00645 phosphoglucomutase
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01143 'Pyridoxine 5'-phosphate synthase' transl_table=11 1.00 OHPLBJKB_03027 Phosphoglucomutase low > 73
Escherichia coli ECRC99 1.00 KEDOAH_06795 pdxJ pyridoxine 5'-phosphate synthase 1.00 KEDOAH_20870 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
Escherichia coli ECOR38 0.99 HEPCGN_20570 pdxJ pyridoxine 5'-phosphate synthase 1.00 HEPCGN_01125 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) low > 87
Escherichia fergusonii Becca 0.99 EFB2_01332 Pyridoxine 5'-phosphate synthase 1.00 EFB2_03406 Phosphoglucomutase low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS14515 pyridoxine 5'-phosphate synthase 1.00 ECOLIN_RS03730 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF2472 'Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)' transl_table=11 0.97 GFF4601 Phosphoglucomutase (EC 5.4.2.2)
Klebsiella michiganensis M5al 0.94 BWI76_RS21305 pyridoxine 5'-phosphate synthase 0.96 BWI76_RS08290 phosphoglucomutase, alpha-D-glucose phosphate-specific
Enterobacter asburiae PDN3 0.93 EX28DRAFT_0082 pyridoxine 5'-phosphate synthase 0.95 EX28DRAFT_2287 phosphoglucomutase, alpha-D-glucose phosphate-specific
Enterobacter sp. TBS_079 0.93 MPMX20_03435 Pyridoxine 5'-phosphate synthase 0.95 MPMX20_01334 Phosphoglucomutase low > 85
Dickeya dianthicola ME23 0.81 DZA65_RS16885 pyridoxine 5'-phosphate synthase 0.86 DZA65_RS06745 alpha-D-glucose phosphate-specific phosphoglucomutase low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS15805 pyridoxine 5'-phosphate synthase 0.86 HGI48_RS06400 alpha-D-glucose phosphate-specific phosphoglucomutase low > 71
Dickeya dadantii 3937 0.81 DDA3937_RS15720 pyridoxine 5'-phosphate synthase 0.86 DDA3937_RS06355 alpha-D-glucose phosphate-specific phosphoglucomutase low > 74
Pectobacterium carotovorum WPP14 0.80 HER17_RS05830 pyridoxine 5'-phosphate synthase 0.89 HER17_RS15060 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) low > 75
Pantoea sp. MT58 0.79 IAI47_04895 pyridoxine 5'-phosphate synthase 0.90 IAI47_13835 alpha-D-glucose phosphate-specific phosphoglucomutase
Rahnella sp. WP5 0.78 EX31_RS21850 pyridoxine 5'-phosphate synthase 0.88 EX31_RS23320 alpha-D-glucose phosphate-specific phosphoglucomutase low > 89
Serratia liquefaciens MT49 0.78 IAI46_19535 pyridoxine 5'-phosphate synthase 0.86 IAI46_06145 alpha-D-glucose phosphate-specific phosphoglucomutase
Erwinia tracheiphila SCR3 0.76 LU632_RS15370 pdxJ pyridoxine 5'-phosphate synthase 0.89 LU632_RS16170 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
Alteromonas macleodii MIT1002 0.73 MIT1002_00791 Pyridoxine 5'-phosphate synthase 0.61 MIT1002_01534 Phosphoglucomutase
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_12440 pyridoxine 5'-phosphate synthase 0.71 CSW01_10470 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
Shewanella sp. ANA-3 0.67 Shewana3_3023 pyridoxine 5'-phosphate synthase (RefSeq) 0.59 Shewana3_2134 phosphoglucomutase (RefSeq)
Shewanella loihica PV-4 0.67 Shew_1057 pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) 0.56 Shew_1922 phosphoglucomutase (RefSeq)
Shewanella oneidensis MR-1 0.67 SO1351 pdxJ pyridoxal phosphate biosynthetic protein PdxJ (NCBI ptt file) 0.58 SO2336 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific (NCBI ptt file)
Shewanella amazonensis SB2B 0.66 Sama_0883 pyridoxine 5'-phosphate synthase (RefSeq) 0.56 Sama_1706 phosphoglucomutase (RefSeq)
Pseudomonas sp. RS175 0.63 PFR28_03520 'Pyridoxine 5'-phosphate synthase' transl_table=11 0.58 PFR28_01741 Phosphoglucomutase
Pseudomonas putida KT2440 0.63 PP_1436 Pyridoxine 5'-phosphate synthase 0.58 PP_3578 phosphoglucomutase
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_889 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.57 Pf1N1B4_4886 Phosphoglucomutase (EC 5.4.2.2)
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4837 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.57 PfGW456L13_3066 Phosphoglucomutase (EC 5.4.2.2)
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_17510 pyridoxine 5'-phosphate synthase 0.57 AO356_27065 phosphoglucomutase
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_3948 pyridoxine 5'-phosphate synthase 0.56 Psyr_2908 Phosphoglucomutase, alpha-D-glucose phosphate-specific
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_3948 pyridoxine 5'-phosphate synthase 0.56 Psyr_2908 Phosphoglucomutase, alpha-D-glucose phosphate-specific
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_5429 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.57 Pf6N2E2_1059 Phosphoglucomutase (EC 5.4.2.2)
Pseudomonas stutzeri RCH2 0.61 Psest_3089 pyridoxine 5'-phosphate synthase 0.58 Psest_0039 phosphoglucomutase, alpha-D-glucose phosphate-specific
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_04495 pyridoxine 5'-phosphate synthase 0.57 AO353_24665 phosphoglucomutase
Pseudomonas simiae WCS417 0.60 PS417_05205 pyridoxine 5'-phosphate synthase 0.57 PS417_13395 phosphoglucomutase
Pseudomonas fluorescens SBW25 0.60 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.57 PFLU_RS15395 alpha-D-glucose phosphate-specific phosphoglucomutase
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.57 PFLU_RS15395 alpha-D-glucose phosphate-specific phosphoglucomutase
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS09675 pyridoxine 5'-phosphate synthase 0.56 HSERO_RS13360 phosphoglucomutase
Dinoroseobacter shibae DFL-12 0.54 Dshi_0196 pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) 0.08 Dshi_2020 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I (RefSeq)
Azospirillum brasilense Sp245 0.54 AZOBR_RS22055 pyridoxine 5'-phosphate synthase 0.09 AZOBR_RS02670 phosphoglucomutase low > 97
Synechococcus elongatus PCC 7942 0.52 Synpcc7942_1194 pdxJ pyridoxal phosphate biosynthetic protein PdxJ 0.08 Synpcc7942_0156 phosphoglucomutase
Magnetospirillum magneticum AMB-1 0.52 AMB_RS11405 pyridoxine 5'-phosphate synthase 0.08 AMB_RS02970 alpha-D-glucose phosphate-specific phosphoglucomutase
Bosea sp. OAE506 0.52 ABIE41_RS19905 pyridoxine 5'-phosphate synthase 0.57 ABIE41_RS01980 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_01626 pyridoxal phosphate biosynthetic protein pdxJ 0.59 CCNA_00083 phosphoglucomutase/phosphomannomutase
Caulobacter crescentus NA1000 0.52 CCNA_01626 pyridoxal phosphate biosynthetic protein pdxJ 0.59 CCNA_00083 phosphoglucomutase/phosphomannomutase
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_0281 pyridoxine 5'-phosphate synthase (RefSeq) 0.62 DvMF_0227 phosphoglucomutase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU1908 pdxJ pyridoxal phosphate biosynthetic protein PdxJ (TIGR) 0.60 DVU1428 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific (TIGR) low > 55
Rhodopseudomonas palustris CGA009 0.48 TX73_013960 pyridoxine 5'-phosphate synthase 0.60 TX73_007630 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS05520 pyridoxine 5'-phosphate synthase 0.57 A4249_RS00035 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
Bacteroides ovatus ATCC 8483 0.33 BACOVA_01142 pyridoxine 5'-phosphate synthase 0.08 BACOVA_04289 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS06645 pyridoxine 5'-phosphate synthase 0.07 HMPREF1181_RS10675 phospho-sugar mutase
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02500 pyridoxine 5'-phosphate synthase 0.07 ABI39_RS18825 phospho-sugar mutase
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS08325 pyridoxine 5'-phosphate synthase 0.07 HMPREF1058_RS05040 phospho-sugar mutase
Bacteroides thetaiotaomicron VPI-5482 0.32 BT3918 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) 0.07 BT1548 phosphoglucomutase phosphomannomutase (NCBI ptt file)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS01795 pyridoxine 5'-phosphate synthase 0.08 ABZR88_RS10185 phosphoglucosamine mutase
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS25170 pyridoxine 5'-phosphate synthase 0.07 CA265_RS09660 phosphoglucomutase
Pontibacter actiniarum KMM 6156, DSM 19842 0.30 CA264_15275 pyridoxine 5'-phosphate synthase 0.07 CA264_09350 phosphoglucomutase
Rhodanobacter denitrificans MT42 0.29 LRK55_RS08205 pyridoxine 5'-phosphate synthase 0.56 LRK55_RS08515 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS08440 pyridoxine 5'-phosphate synthase 0.56 LRK54_RS08750 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_15220 pyridoxine 5'-phosphate synthase 0.56 OKGIIK_15515 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
Variovorax sp. SCN45 0.22 GFF3873 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.55 GFF1309 Phosphoglucomutase (EC 5.4.2.2)
Variovorax sp. OAS795 0.22 ABID97_RS08380 pyridoxine 5'-phosphate synthase 0.56 ABID97_RS15660 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)

Not shown: 30 genomes with orthologs for BNILDI_11900 only; 3 genomes with orthologs for BNILDI_21485 only