| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu2239 | | ubiquinol-cytochrome C reductase iron-sulfur subunit | 1.0 | Atu1537 | | cytochrome-c oxidase, FixN chain | 0.47 | 11 |
| Rhizobium sp. OAE497 | 0.83 | ABIE40_RS13130 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.82 | ABIE40_RS26170 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.83 | SMc00187 | | ubiquinol-cytochrome C reductase iron-sulfur subunit protein | 0.84 | SMa1220 | | cbb3-type cytochrome c oxidase subunit I | low | > 103 |
| Azospirillum sp. SherDot2 | 0.58 | MPMX19_05012 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.62 | MPMX19_00206 | | Cytochrome c oxidase subunit 1, bacteroid | — | — |
| Azospirillum brasilense Sp245 | 0.57 | AZOBR_RS20745 | | ubiquinol-cytochrome C reductase | 0.63 | AZOBR_RS01180 | | peptidase S41 | — | — |
| Rhodospirillum rubrum S1H | 0.54 | Rru_A0364 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI) | 0.64 | Rru_A3332 | | Cytochrome c oxidase cbb3-type, subunit I (NCBI) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.54 | AMB_RS20675 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.61 | AMB_RS22070 | | cytochrome-c oxidase, cbb3-type subunit I | — | — |
| Dinoroseobacter shibae DFL-12 | 0.52 | Dshi_3278 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | 0.69 | Dshi_0661 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.50 | TX73_006120 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.65 | TX73_000100 | | cytochrome-c oxidase, cbb3-type subunit I | — | — |
| Bosea sp. OAE506 | 0.49 | ABIE41_RS11190 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.66 | ABIE41_RS10565 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 77 |
| Caulobacter crescentus NA1000 Δfur | 0.48 | CCNA_00505 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.66 | CCNA_01467 | | cytochrome cbb3 oxidase subunit I ccoN | low | > 67 |
| Caulobacter crescentus NA1000 | 0.48 | CCNA_00505 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.66 | CCNA_01467 | | cytochrome cbb3 oxidase subunit I ccoN | low | > 66 |
| Phaeobacter inhibens DSM 17395 | 0.45 | PGA1_c34000 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.70 | PGA1_c30120 | | cytochrome c oxidase subunit 1 | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.32 | ABZR86_RS09880 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.48 | ABZR86_RS04450 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.31 | LRK55_RS13480 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.46 | LRK55_RS17455 | | cytochrome-c oxidase, cbb3-type subunit I | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.31 | Pf1N1B4_962 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | 0.55 | Pf1N1B4_3884 | | Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.31 | AO356_17065 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.54 | AO356_02405 | | cytochrome C oxidase Cbb3 | 0.43 | 22 |
| Pseudomonas fluorescens FW300-N2E3 | 0.31 | AO353_15245 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.54 | AO353_00585 | | cytochrome C oxidase Cbb3 | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.31 | Pf6N2E2_5337 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | 0.54 | Pf6N2E2_2305 | | Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) | low | > 103 |
| Rhodanobacter sp. FW510-T8 | 0.31 | OKGIIK_03005 | petA | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.47 | OKGIIK_07655 | ccoN | cytochrome-c oxidase, cbb3-type subunit I | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.31 | LRK54_RS13765 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.46 | LRK54_RS17230 | | cytochrome-c oxidase, cbb3-type subunit I | — | — |
| Lysobacter sp. OAE881 | 0.30 | ABIE51_RS15440 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.54 | ABIE51_RS03855 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 62 |
| Pseudomonas sp. RS175 | 0.30 | PFR28_03606 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.54 | PFR28_01095 | | Cbb3-type cytochrome c oxidase subunit CcoN1 | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.30 | RR42_RS18825 | | ubiquinol-cytochrome C reductase | 0.56 | RR42_RS12910 | | cbb3-type cytochrome c oxidase subunit I | low | > 128 |
| Alteromonas macleodii MIT1002 | 0.29 | MIT1002_00814 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.54 | MIT1002_02129 | | hypothetical protein | low | > 70 |
| Pseudomonas putida KT2440 | 0.29 | PP_1317 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.54 | PP_4250 | | cytochrome c oxidase subunit I, cbb3-type | 0.56 | 4 |
| Pseudomonas stutzeri RCH2 | 0.29 | Psest_3279 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | 0.55 | Psest_2527 | | cytochrome c oxidase, cbb3-type, subunit I | — | — |
| Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS04195 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.55 | PFLU_RS22320 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS04195 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.55 | PFLU_RS22320 | | cytochrome-c oxidase, cbb3-type subunit I | 0.59 | 8 |
| Vibrio cholerae E7946 ATCC 55056 | 0.29 | CSW01_03045 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.54 | CSW01_07230 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 62 |
| Pseudomonas sp. S08-1 | 0.29 | OH686_08390 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | 0.55 | OH686_02175 | | cytochrome c oxidase, cbb3-type, subunit I | — | — |
| Kangiella aquimarina DSM 16071 | 0.29 | B158DRAFT_1672 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | 0.55 | B158DRAFT_1966 | | cytochrome c oxidase, cbb3-type, subunit I | low | > 40 |
| Variovorax sp. SCN45 | 0.29 | GFF6694 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | 0.53 | GFF6964 | | Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) | low | > 127 |
| Variovorax sp. OAS795 | 0.29 | ABID97_RS22985 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.55 | ABID97_RS16225 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 91 |
| Pseudomonas simiae WCS417 | 0.28 | PS417_04155 | | ubiquinol-cytochrome C reductase | 0.55 | PS417_20700 | | cbb3-type cytochrome c oxidase subunit I | — | — |
| Castellaniella sp019104865 MT123 | 0.28 | ABCV34_RS12635 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.55 | ABCV34_RS06870 | | cytochrome-c oxidase, cbb3-type subunit I | — | — |
| Marinobacter adhaerens HP15 | 0.28 | HP15_545 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.56 | HP15_2107 | | cytochrome c oxidase, cbb3-type, subunit I | — | — |
| Dechlorosoma suillum PS | 0.28 | Dsui_1812 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | 0.56 | Dsui_1627 | | cytochrome c oxidase, cbb3-type, subunit I | — | — |
| Shewanella sp. ANA-3 | 0.28 | Shewana3_0601 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | 0.56 | Shewana3_2107 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.27 | SO0608 | petA | ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI ptt file) | 0.56 | SO2364 | ccoN | cytochrome c oxidase, cbb3-type, subunit I (NCBI ptt file) | — | — |
| Shewanella loihica PV-4 | 0.27 | Shew_0570 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | 0.55 | Shew_1985 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | 0.78 | 3 |
| Shewanella amazonensis SB2B | 0.27 | Sama_3021 | | ubiquinol--cytochrome-c reductase (RefSeq) | 0.55 | Sama_1791 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | 0.97 | 2 |
| Herbaspirillum seropedicae SmR1 | 0.27 | HSERO_RS20245 | | ubiquinol-cytochrome C reductase | 0.56 | HSERO_RS16055 | | cytochrome oxidase subunit I | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.26 | GFF1295 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | 0.57 | GFF4135 | | Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) | — | — |
| Ralstonia solanacearum GMI1000 | 0.25 | RS_RS14675 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.54 | RS_RS06395 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.25 | RALBFv3_RS06730 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.54 | RALBFv3_RS15615 | | cytochrome-c oxidase, cbb3-type subunit I | — | — |
| Ralstonia solanacearum UW163 | 0.25 | UW163_RS06885 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.54 | UW163_RS13075 | | cytochrome-c oxidase, cbb3-type subunit I | — | — |
| Ralstonia solanacearum PSI07 | 0.25 | RPSI07_RS10505 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.54 | RPSI07_RS17740 | | cytochrome-c oxidase, cbb3-type subunit I | — | — |
| Ralstonia sp. UNC404CL21Col | 0.24 | ABZR87_RS02385 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.54 | ABZR87_RS11145 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 80 |
Not shown: 7 genomes with orthologs for Atu2239 only; 5 genomes with orthologs for Atu1537 only