Conservation of cofitness between Atu0298 and Atu1141 in Agrobacterium fabrum C58

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0298 orotidine 5 1.0 Atu1141 Phosphoribosylglycinamide synthetase 0.92 6
Rhizobium sp. OAE497 0.79 ABIE40_RS01345 orotidine-5'-phosphate decarboxylase 0.91 ABIE40_RS06560 phosphoribosylformylglycinamidine cyclo-ligase — —
Sinorhizobium meliloti 1021 0.75 SMc00412 orotidine 5'-phosphate decarboxylase 0.85 SMc00615 phosphoribosylaminoimidazole synthetase 0.89 13
Bosea sp. OAE506 0.53 ABIE41_RS00050 orotidine-5'-phosphate decarboxylase 0.70 ABIE41_RS17040 phosphoribosylformylglycinamidine cyclo-ligase low > 77
Rhodopseudomonas palustris CGA009 0.51 TX73_001750 orotidine-5'-phosphate decarboxylase 0.68 TX73_015785 phosphoribosylformylglycinamidine cyclo-ligase — —
Caulobacter crescentus NA1000 0.44 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.58 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase 0.88 37
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.58 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS14665 orotidine-5'-phosphate decarboxylase 0.59 A4249_RS08210 phosphoribosylformylglycinamidine cyclo-ligase — —
Phaeobacter inhibens DSM 17395 0.36 PGA1_c32450 orotidine 5'-phosphate decarboxylase PyrF 0.63 PGA1_c13260 phosphoribosylformylglycinamidine cyclo-ligase PurM 0.84 16
Alteromonas macleodii MIT1002 0.36 MIT1002_02184 Orotidine 5'-phosphate decarboxylase 0.52 MIT1002_02219 Phosphoribosylformylglycinamidine cyclo-ligase low > 70
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_2331 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.58 B158DRAFT_2385 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_09560 orotidine-5'-phosphate decarboxylase 0.51 CSW01_11350 phosphoribosylformylglycinamidine cyclo-ligase 0.53 26
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_2569 pyrF orotidine 5'-phosphate decarboxylase 0.50 Synpcc7942_0851 purM phosphoribosylaminoimidazole synthetase — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0234 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.58 Ga0059261_0228 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Marinobacter adhaerens HP15 0.32 HP15_1370 orotidine 5'-phosphate decarboxylase 0.51 HP15_1299 phosphoribosylaminoimidazole synthetase — —
Shewanella sp. ANA-3 0.32 Shewana3_1981 orotidine 5'-phosphate decarboxylase (RefSeq) 0.52 Shewana3_2545 phosphoribosylaminoimidazole synthetase (RefSeq) 0.84 34
Shewanella oneidensis MR-1 0.31 SO2398 pyrF orotidine 5`-phosphate decarboxylase (NCBI ptt file) 0.52 SO2760 purM phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) 0.86 15
Shewanella amazonensis SB2B 0.31 Sama_1740 orotidine 5'-phosphate decarboxylase (RefSeq) 0.52 Sama_2097 phosphoribosylaminoimidazole synthetase (RefSeq) 0.56 13
Dinoroseobacter shibae DFL-12 0.31 Dshi_0615 orotidine 5'-phosphate decarboxylase (RefSeq) 0.60 Dshi_1889 phosphoribosylformylglycinamidine cyclo-ligase (RefSeq) 0.86 7
Dickeya dadantii 3937 0.31 DDA3937_RS12525 orotidine-5'-phosphate decarboxylase 0.54 DDA3937_RS06025 phosphoribosylformylglycinamidine cyclo-ligase 0.90 3
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2056 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.53 PfGW456L13_4252 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_01670 orotidine 5'-phosphate decarboxylase 0.52 AO353_02680 phosphoribosylaminoimidazole synthetase — —
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS09110 orotidine-5'-phosphate decarboxylase 0.53 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens SBW25 0.30 PFLU_RS09110 orotidine-5'-phosphate decarboxylase 0.53 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase — —
Dickeya dianthicola 67-19 0.30 HGI48_RS12580 orotidine-5'-phosphate decarboxylase 0.53 HGI48_RS06070 phosphoribosylformylglycinamidine cyclo-ligase 0.77 8
Pantoea sp. MT58 0.30 IAI47_09275 orotidine-5'-phosphate decarboxylase 0.51 IAI47_05180 phosphoribosylformylglycinamidine cyclo-ligase 0.97 6
Shewanella loihica PV-4 0.30 Shew_1958 orotidine 5'-phosphate decarboxylase (RefSeq) 0.50 Shew_1513 phosphoribosylaminoimidazole synthetase (RefSeq) — —
Escherichia coli ECOR27 0.30 NOLOHH_20215 pyrF orotidine-5'-phosphate decarboxylase 0.53 NOLOHH_13460 purM Phosphoribosylformylglycinamidine cyclo-ligase low > 57
Escherichia coli ECRC62 0.30 BNILDI_18365 pyrF orotidine-5'-phosphate decarboxylase 0.53 BNILDI_12270 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Dickeya dianthicola ME23 0.30 DZA65_RS13030 orotidine-5'-phosphate decarboxylase 0.53 DZA65_RS06420 phosphoribosylformylglycinamidine cyclo-ligase 0.65 63
Erwinia tracheiphila SCR3 0.30 LU632_RS12500 pyrF orotidine-5'-phosphate decarboxylase 0.51 LU632_RS08275 purM phosphoribosylformylglycinamidine cyclo-ligase 0.89 10
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_02401 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.53 OHPLBJKB_01227 Phosphoribosylformylglycinamidine cyclo-ligase 0.40 53
Escherichia coli BL21 0.30 ECD_01258 orotidine-5'-phosphate decarboxylase 0.53 ECD_02391 phosphoribosylaminoimidazole synthetase low > 60
Acinetobacter radioresistens SK82 0.30 MPMX26_01242 Orotidine 5'-phosphate decarboxylase 0.48 MPMX26_02206 Phosphoribosylformylglycinamidine cyclo-ligase 0.80 29
Escherichia coli BW25113 0.30 b1281 pyrF orotidine 5'-phosphate decarboxylase (NCBI) 0.53 b2499 purM phosphoribosylaminoimidazole synthetase (NCBI) 0.89 8
Pseudomonas putida KT2440 0.30 PP_1815 Orotidine 5'-phosphate decarboxylase 0.51 PP_1665 Phosphoribosylformylglycinamidine cyclo-ligase — —
Pectobacterium carotovorum WPP14 0.30 HER17_RS09390 orotidine-5'-phosphate decarboxylase 0.53 HER17_RS15465 phosphoribosylformylglycinamidine cyclo-ligase 0.95 24
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_514 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.52 Pf1N1B4_3698 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Escherichia fergusonii Becca 0.29 EFB2_02644 Orotidine 5'-phosphate decarboxylase 0.53 EFB2_01399 Phosphoribosylformylglycinamidine cyclo-ligase low > 86
Pseudomonas sp. RS175 0.29 PFR28_03064 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.52 PFR28_03217 Phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_1836 orotidine-5'-phosphate decarboxylase 0.53 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase — —
Klebsiella michiganensis M5al 0.29 BWI76_RS11965 orotidine-5'-phosphate decarboxylase 0.53 BWI76_RS20965 phosphoribosylformylglycinamidine cyclo-ligase 0.74 7
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_1836 orotidine-5'-phosphate decarboxylase 0.53 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase — —
Fusobacterium nucleatum SB010 0.29 HUW76_08730 orotidine-5'-phosphate decarboxylase 0.41 HUW76_05175 phosphoribosylformylglycinamidine cyclo-ligase low > 35
Enterobacter asburiae PDN3 0.29 EX28DRAFT_0954 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.54 EX28DRAFT_0168 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Rhodospirillum rubrum S1H 0.29 Rru_A3424 Orotidine-5'-phosphate decarboxylase (NCBI) 0.60 Rru_A2167 Phosphoribosylformylglycinamidine cyclo-ligase (NCBI) low > 58
Pseudomonas simiae WCS417 0.29 PS417_09055 orotidine 5'-phosphate decarboxylase 0.53 PS417_20120 phosphoribosylaminoimidazole synthetase — —
Escherichia coli ECRC99 0.29 KEDOAH_26215 pyrF orotidine-5'-phosphate decarboxylase 0.53 KEDOAH_06410 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECOR38 0.29 HEPCGN_25650 pyrF orotidine-5'-phosphate decarboxylase 0.53 HEPCGN_20975 purM Phosphoribosylformylglycinamidine cyclo-ligase low > 85
Escherichia coli ECRC102 0.29 NIAGMN_26720 pyrF orotidine-5'-phosphate decarboxylase 0.53 NIAGMN_19580 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Azospirillum brasilense Sp245 0.29 AZOBR_RS03135 orotidine 5'-phosphate decarboxylase 0.61 AZOBR_RS16290 phosphoribosylaminoimidazole synthetase low > 97
Escherichia coli ECRC98 0.29 JDDGAC_05095 pyrF orotidine-5'-phosphate decarboxylase 0.53 JDDGAC_25755 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC101 0.29 MCAODC_15715 pyrF orotidine-5'-phosphate decarboxylase 0.53 MCAODC_12340 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC101 0.29 OKFHMN_02550 pyrF orotidine-5'-phosphate decarboxylase 0.53 OKFHMN_21810 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Rahnella sp. WP5 0.29 EX31_RS09855 orotidine-5'-phosphate decarboxylase 0.51 EX31_RS22695 phosphoribosylformylglycinamidine cyclo-ligase 0.88 60
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_5887 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.53 Pf6N2E2_5729 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.5259.1 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.47 Xcc-8004.1676.1 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_19850 orotidine 5'-phosphate decarboxylase 0.53 AO356_19090 phosphoribosylaminoimidazole synthetase — —
Pseudomonas sp. S08-1 0.28 OH686_00580 Orotidine 5'-phosphate decarboxylase 0.52 OH686_18995 Phosphoribosylformylglycinamidine cyclo-ligase — —
Enterobacter sp. TBS_079 0.28 MPMX20_02494 Orotidine 5'-phosphate decarboxylase 0.53 MPMX20_03354 Phosphoribosylformylglycinamidine cyclo-ligase 0.82 28
Pseudomonas stutzeri RCH2 0.28 Psest_1714 orotidine 5'-phosphate decarboxylase, subfamily 1 0.52 Psest_1474 phosphoribosylaminoimidazole synthetase — —
Escherichia coli Nissle 1917 0.28 ECOLIN_RS07730 orotidine-5'-phosphate decarboxylase 0.53 ECOLIN_RS14190 phosphoribosylformylglycinamidine cyclo-ligase — —
Serratia liquefaciens MT49 0.28 IAI46_13915 orotidine-5'-phosphate decarboxylase 0.52 IAI46_18885 phosphoribosylformylglycinamidine cyclo-ligase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF2704 'Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)' transl_table=11 0.53 GFF2169 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) low > 78
Desulfovibrio vulgaris Miyazaki F 0.26 DvMF_1137 orotidine 5'-phosphate decarboxylase (RefSeq) 0.48 DvMF_0202 phosphoribosylaminoimidazole synthetase (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.26 AMB_RS20255 orotidine-5'-phosphate decarboxylase 0.64 AMB_RS14330 phosphoribosylformylglycinamidine cyclo-ligase — —
Azospirillum sp. SherDot2 0.26 MPMX19_02208 Orotidine 5'-phosphate decarboxylase 0.61 MPMX19_01304 Phosphoribosylformylglycinamidine cyclo-ligase — —
Desulfovibrio vulgaris Hildenborough JW710 0.24 DVU0901 pyrF orotidine 5`-phosphate decarboxylase (TIGR) 0.46 DVU1406 purM phosphoribosylformylglycinamidine cyclo-ligase (TIGR) — —

Not shown: 0 genomes with orthologs for Atu0298 only; 26 genomes with orthologs for Atu1141 only