Conservation of cofitness between Atu2650 and Atu0432 in Agrobacterium fabrum C58

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2650 glycerol-3-phosphate dehydrogenase 1.0 Atu0432 O-succinylhomoserine sulfhydrylase 0.90 6
Rhizobium sp. OAE497 0.72 ABIE40_RS18055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.89 ABIE40_RS02340 O-succinylhomoserine sulfhydrylase 0.75 14
Sinorhizobium meliloti 1021 0.64 SMc03229 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.89 SMc02217 O-succinylhomoserine sulfhydrylase 0.79 18
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_0712 Glycerol-3-phosphate dehydrogenase 0.36 B158DRAFT_1522 methionine gamma-lyase — —
Dinoroseobacter shibae DFL-12 0.38 Dshi_3414 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein (RefSeq) 0.56 Dshi_2410 O-succinylhomoserine sulfhydrylase (RefSeq) — —
Rhodospirillum rubrum S1H 0.38 Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) 0.50 Rru_A3214 O-succinylhomoserine sulfhydrylase (NCBI) 0.52 46
Phaeobacter inhibens DSM 17395 0.38 PGA1_c35480 glycerol-3-phosphate dehydrogenase GpsA 0.58 PGA1_c23540 O-succinylhomoserine sulfhydrylase MetZ 0.85 27
Rahnella sp. WP5 0.38 EX31_RS14340 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.35 EX31_RS04985 PLP-dependent transferase low > 89
Dickeya dadantii 3937 0.37 DDA3937_RS20405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.26 DDA3937_RS00950 cystathionine gamma-synthase — —
Azospirillum sp. SherDot2 0.37 MPMX19_02123 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.52 MPMX19_01364 O-succinylhomoserine sulfhydrylase 0.71 18
Pectobacterium carotovorum WPP14 0.37 HER17_RS20735 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.28 HER17_RS07405 PLP-dependent aspartate aminotransferase family protein low > 75
Caulobacter crescentus NA1000 0.37 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.57 CCNA_02321 O-succinylhomoserine sulfhydrylase — —
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.57 CCNA_02321 O-succinylhomoserine sulfhydrylase — —
Klebsiella michiganensis M5al 0.36 BWI76_RS27210 glycerol-3-phosphate dehydrogenase 0.27 BWI76_RS16730 cystathionine gamma-lyase — —
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_13405 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.26 CSW01_13550 O-succinylhomoserine (thiol)-lyase — —
Azospirillum brasilense Sp245 0.36 AZOBR_RS00325 glycerol-3-phosphate dehydrogenase 0.54 AZOBR_RS02140 O-succinylhomoserine sulfhydrylase 0.79 7
Enterobacter sp. TBS_079 0.36 MPMX20_00125 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.26 MPMX20_04531 Cystathionine gamma-synthase — —
Shewanella loihica PV-4 0.36 Shew_3803 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.37 Shew_2491 methionine gamma-lyase (RefSeq) — —
Shewanella amazonensis SB2B 0.36 Sama_0063 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.37 Sama_1242 methionine gamma-lyase (RefSeq) — —
Shewanella sp. ANA-3 0.35 Shewana3_0054 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.38 Shewana3_2643 methionine gamma-lyase (RefSeq) — —
Shewanella oneidensis MR-1 0.35 SO0053 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI ptt file) 0.38 SO1812 mdeA Methionine gamma-lyase (EC 4.4.1.11) (from data) — —
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_2234 Glycerol-3-phosphate dehydrogenase 0.52 Ga0059261_3194 O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) (from data) low > 68
Bosea sp. OAE506 0.35 ABIE41_RS05655 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.64 ABIE41_RS03970 O-succinylhomoserine sulfhydrylase low > 77
Fusobacterium nucleatum SB010 0.34 HUW76_05650 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.37 HUW76_08240 methionine gamma-lyase — —
Rhodopseudomonas palustris CGA009 0.34 TX73_001320 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.65 TX73_024775 O-succinylhomoserine sulfhydrylase low > 86
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_02000 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.43 H281DRAFT_06059 O-succinylhomoserine sulfhydrylase 0.65 2
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF1222 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.42 GFF301 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 90
Marinobacter adhaerens HP15 0.31 HP15_1762 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.38 HP15_1820 methionine gamma-lyase — —
Pseudomonas stutzeri RCH2 0.30 Psest_2471 Glycerol-3-phosphate dehydrogenase 0.43 Psest_2578 O-succinylhomoserine sulfhydrylase — —
Paraburkholderia graminis OAS925 0.29 ABIE53_000667 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.42 ABIE53_004817 O-succinylhomoserine sulfhydrylase 0.43 38
Variovorax sp. OAS795 0.29 ABID97_RS07405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.41 ABID97_RS21630 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_5875 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.42 Pf6N2E2_77 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) — —
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_19795 glycerol-3-phosphate dehydrogenase 0.42 AO356_21470 O-succinylhomoserine sulfhydrylase 0.90 10
Pseudomonas sp. RS175 0.29 PFR28_03076 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.42 PFR28_02810 O-succinylhomoserine sulfhydrylase — —
Variovorax sp. SCN45 0.29 GFF2573 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.40 GFF3088 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) — —
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_01735 glycerol-3-phosphate dehydrogenase 0.43 AO353_20695 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens SBW25 0.28 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.43 PFLU_RS20510 O-succinylhomoserine sulfhydrylase low > 109
Mycobacterium tuberculosis H37Rv 0.28 Rv2982c Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA2 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) 0.50 Rv0391 Probable O-succinylhomoserine sulfhydrylase MetZ (OSH sulfhydrylase) 0.54 29
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.43 PFLU_RS20510 O-succinylhomoserine sulfhydrylase low > 109
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.44 Psyr_1669 O-succinylhomoserine sulfhydrylase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.44 Psyr_1669 O-succinylhomoserine sulfhydrylase 0.72 1
Pseudomonas simiae WCS417 0.28 PS417_09000 glycerol-3-phosphate dehydrogenase 0.42 PS417_18530 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_2046 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.42 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.88 10
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS02610 glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.43 BPHYT_RS33835 O-succinylhomoserine sulfhydrylase 0.77 22
Pseudomonas putida KT2440 0.28 PP_4169 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.43 PP_2001 O-succinylhomoserine sulfhydrylase — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS01465 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.44 QEN71_RS17685 O-succinylhomoserine sulfhydrylase low > 153
Dechlorosoma suillum PS 0.27 Dsui_1277 glycerol-3-phosphate dehydrogenase 0.44 Dsui_3185 O-succinylhomoserine sulfhydrylase — —
Acinetobacter radioresistens SK82 0.26 MPMX26_01116 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.45 MPMX26_01645 O-succinylhomoserine sulfhydrylase — —
Pseudomonas sp. S08-1 0.26 OH686_00475 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.42 OH686_04415 O-succinylhomoserine sulfhydrylase 0.60 45
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS01845 glycerol-3-phosphate dehydrogenase 0.42 RR42_RS14320 O-succinylhomoserine sulfhydrylase 0.83 7
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_0322 Glycerol-3-phosphate dehydrogenase 0.42 Echvi_2283 Cystathionine beta-lyases/cystathionine gamma-synthases — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.18 CA264_05630 glycerol-3-phosphate dehydrogenase 0.42 CA264_02530 O-succinylhomoserine sulfhydrylase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.17 CA265_RS16375 glycerol-3-phosphate dehydrogenase 0.43 CA265_RS13080 O-succinylhomoserine sulfhydrylase — —

Not shown: 47 genomes with orthologs for Atu2650 only; 1 genomes with orthologs for Atu0432 only