Conservation of cofitness between Atu1308 and Atu0298 in Agrobacterium fabrum C58

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1308 aspartate carbamoyl transferase catalytic subunit 1.0 Atu0298 orotidine 5 0.94 2
Sinorhizobium meliloti 1021 0.91 SMc01360 aspartate carbamoyltransferase catalytic subunit 0.75 SMc00412 orotidine 5'-phosphate decarboxylase 0.90 3
Rhizobium sp. OAE497 0.89 ABIE40_RS07385 aspartate carbamoyltransferase catalytic subunit 0.79 ABIE40_RS01345 orotidine-5'-phosphate decarboxylase — —
Bosea sp. OAE506 0.75 ABIE41_RS17230 aspartate carbamoyltransferase catalytic subunit 0.53 ABIE41_RS00050 orotidine-5'-phosphate decarboxylase 0.81 1
Rhodopseudomonas palustris CGA009 0.68 TX73_016120 aspartate carbamoyltransferase catalytic subunit 0.51 TX73_001750 orotidine-5'-phosphate decarboxylase — —
Rhodospirillum rubrum S1H 0.67 Rru_A3190 Aspartate carbamoyltransferase (NCBI) 0.29 Rru_A3424 Orotidine-5'-phosphate decarboxylase (NCBI) 0.68 4
Magnetospirillum magneticum AMB-1 0.67 AMB_RS18300 aspartate carbamoyltransferase 0.26 AMB_RS20255 orotidine-5'-phosphate decarboxylase — —
Azospirillum sp. SherDot2 0.67 MPMX19_01054 Aspartate carbamoyltransferase 0.26 MPMX19_02208 Orotidine 5'-phosphate decarboxylase — —
Azospirillum brasilense Sp245 0.66 AZOBR_RS20575 aspartate carbamoyltransferase 0.29 AZOBR_RS03135 orotidine 5'-phosphate decarboxylase 0.38 72
Phaeobacter inhibens DSM 17395 0.65 PGA1_c03060 aspartate carbamoyltransferase PyrB 0.36 PGA1_c32450 orotidine 5'-phosphate decarboxylase PyrF 0.94 5
Dinoroseobacter shibae DFL-12 0.64 Dshi_3091 aspartate carbamoyltransferase (RefSeq) 0.31 Dshi_0615 orotidine 5'-phosphate decarboxylase (RefSeq) 0.92 1
Sphingomonas koreensis DSMZ 15582 0.61 Ga0059261_0076 aspartate carbamoyltransferase (EC 2.1.3.2) 0.32 Ga0059261_0234 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Caulobacter crescentus NA1000 0.61 CCNA_02525 aspartate carbamoyltransferase 0.44 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.96 3
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02525 aspartate carbamoyltransferase 0.44 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.74 4
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS04260 aspartate carbamoyltransferase catalytic subunit 0.37 A4249_RS14665 orotidine-5'-phosphate decarboxylase — —
Pseudomonas stutzeri RCH2 0.52 Psest_0291 aspartate carbamoyltransferase 0.28 Psest_1714 orotidine 5'-phosphate decarboxylase, subfamily 1 — —
Pseudomonas sp. S08-1 0.52 OH686_10940 aspartate carbamoyltransferase 0.28 OH686_00580 Orotidine 5'-phosphate decarboxylase — —
Marinobacter adhaerens HP15 0.52 HP15_3507 aspartate carbamoyltransferase 0.32 HP15_1370 orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_08135 aspartate carbamoyltransferase catalytic subunit 0.31 AO353_01670 orotidine 5'-phosphate decarboxylase — —
Pseudomonas simiae WCS417 0.51 PS417_26700 aspartate carbamoyltransferase catalytic subunit 0.29 PS417_09055 orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_13450 aspartate carbamoyltransferase catalytic subunit 0.29 AO356_19850 orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.29 Pf6N2E2_5887 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.31 PfGW456L13_2056 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_0482 aspartate carbamoyltransferase 0.29 Psyr_1836 orotidine-5'-phosphate decarboxylase — —
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_0482 aspartate carbamoyltransferase 0.29 Psyr_1836 orotidine-5'-phosphate decarboxylase — —
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU2901 pyrB aspartate carbamoyltransferase (TIGR) 0.24 DVU0901 pyrF orotidine 5`-phosphate decarboxylase (TIGR) — —
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.29 Pf1N1B4_514 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas sp. RS175 0.51 PFR28_04237 Aspartate carbamoyltransferase 0.29 PFR28_03064 'Orotidine 5'-phosphate decarboxylase' transl_table=11 — —
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS28345 aspartate carbamoyltransferase 0.30 PFLU_RS09110 orotidine-5'-phosphate decarboxylase — —
Pseudomonas fluorescens SBW25 0.51 PFLU_RS28345 aspartate carbamoyltransferase 0.30 PFLU_RS09110 orotidine-5'-phosphate decarboxylase — —
Pseudomonas putida KT2440 0.50 PP_4998 Aspartate carbamoyltransferase 0.30 PP_1815 Orotidine 5'-phosphate decarboxylase — —
Desulfovibrio vulgaris Miyazaki F 0.47 DvMF_1425 pyrB aspartate carbamoyltransferase catalytic subunit (RefSeq) 0.26 DvMF_1137 orotidine 5'-phosphate decarboxylase (RefSeq) 0.93 3
Acinetobacter radioresistens SK82 0.46 MPMX26_01099 Aspartate carbamoyltransferase 0.30 MPMX26_01242 Orotidine 5'-phosphate decarboxylase 0.96 3
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.29 Xcc-8004.5259.1 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Synechococcus elongatus PCC 7942 0.41 Synpcc7942_0670 pyrB aspartate carbamoyltransferase catalytic subunit 0.33 Synpcc7942_2569 pyrF orotidine 5'-phosphate decarboxylase — —
Fusobacterium nucleatum SB010 0.31 HUW76_08765 aspartate carbamoyltransferase catalytic subunit 0.29 HUW76_08730 orotidine-5'-phosphate decarboxylase 0.98 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.27 GFF2704 'Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)' transl_table=11 0.52 27
Escherichia coli ECRC98 0.23 JDDGAC_15505 pyrB aspartate carbamoyltransferase 0.29 JDDGAC_05095 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit 0.30 OHPLBJKB_02401 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.78 5
Escherichia fergusonii Becca 0.23 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit 0.29 EFB2_02644 Orotidine 5'-phosphate decarboxylase low > 86
Escherichia coli BL21 0.23 ECD_04113 aspartate carbamoyltransferase, catalytic subunit 0.30 ECD_01258 orotidine-5'-phosphate decarboxylase low > 60
Escherichia coli ECRC101 0.23 OKFHMN_11865 pyrB aspartate carbamoyltransferase 0.29 OKFHMN_02550 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECRC99 0.23 KEDOAH_16290 pyrB aspartate carbamoyltransferase 0.29 KEDOAH_26215 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECRC102 0.23 NIAGMN_09715 pyrB aspartate carbamoyltransferase 0.29 NIAGMN_26720 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia coli BW25113 0.23 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) 0.30 b1281 pyrF orotidine 5'-phosphate decarboxylase (NCBI) 0.90 5
Escherichia coli ECOR27 0.23 NOLOHH_04125 pyrB aspartate carbamoyltransferase 0.30 NOLOHH_20215 pyrF orotidine-5'-phosphate decarboxylase low > 57
Escherichia coli Nissle 1917 0.23 ECOLIN_RS24625 aspartate carbamoyltransferase 0.28 ECOLIN_RS07730 orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECOR38 0.23 HEPCGN_10060 pyrB aspartate carbamoyltransferase 0.29 HEPCGN_25650 pyrF orotidine-5'-phosphate decarboxylase low > 85
Escherichia coli ECRC101 0.23 MCAODC_02370 pyrB aspartate carbamoyltransferase 0.29 MCAODC_15715 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECRC62 0.23 BNILDI_07385 pyrB aspartate carbamoyltransferase 0.30 BNILDI_18365 pyrF orotidine-5'-phosphate decarboxylase — —
Enterobacter asburiae PDN3 0.22 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) 0.29 EX28DRAFT_0954 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Enterobacter sp. TBS_079 0.22 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit 0.28 MPMX20_02494 Orotidine 5'-phosphate decarboxylase 0.95 3
Klebsiella michiganensis M5al 0.22 BWI76_RS02995 aspartate carbamoyltransferase 0.29 BWI76_RS11965 orotidine-5'-phosphate decarboxylase 0.77 6
Serratia liquefaciens MT49 0.22 IAI46_02275 aspartate carbamoyltransferase 0.28 IAI46_13915 orotidine-5'-phosphate decarboxylase 0.78 19
Pantoea sp. MT58 0.22 IAI47_16860 aspartate carbamoyltransferase 0.30 IAI47_09275 orotidine-5'-phosphate decarboxylase 0.98 2
Dickeya dadantii 3937 0.22 DDA3937_RS01925 aspartate carbamoyltransferase 0.31 DDA3937_RS12525 orotidine-5'-phosphate decarboxylase 0.84 7
Erwinia tracheiphila SCR3 0.22 LU632_RS20950 pyrB aspartate carbamoyltransferase 0.30 LU632_RS12500 pyrF orotidine-5'-phosphate decarboxylase 0.95 5
Dickeya dianthicola ME23 0.22 DZA65_RS01970 aspartate carbamoyltransferase 0.30 DZA65_RS13030 orotidine-5'-phosphate decarboxylase 0.97 1
Pectobacterium carotovorum WPP14 0.21 HER17_RS19510 aspartate carbamoyltransferase 0.30 HER17_RS09390 orotidine-5'-phosphate decarboxylase 0.96 28
Dickeya dianthicola 67-19 0.21 HGI48_RS01900 aspartate carbamoyltransferase 0.30 HGI48_RS12580 orotidine-5'-phosphate decarboxylase 0.79 12
Vibrio cholerae E7946 ATCC 55056 0.21 CSW01_12725 aspartate carbamoyltransferase 0.33 CSW01_09560 orotidine-5'-phosphate decarboxylase 0.70 10
Alteromonas macleodii MIT1002 0.21 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain 0.36 MIT1002_02184 Orotidine 5'-phosphate decarboxylase 0.84 50
Rahnella sp. WP5 0.21 EX31_RS12785 aspartate carbamoyltransferase 0.29 EX31_RS09855 orotidine-5'-phosphate decarboxylase 0.92 21
Shewanella oneidensis MR-1 0.20 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) 0.31 SO2398 pyrF orotidine 5`-phosphate decarboxylase (NCBI ptt file) 0.95 4
Shewanella sp. ANA-3 0.20 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.32 Shewana3_1981 orotidine 5'-phosphate decarboxylase (RefSeq) 0.93 6
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_0021 aspartate carbamoyltransferase (EC 2.1.3.2) 0.35 B158DRAFT_2331 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Shewanella loihica PV-4 0.20 Shew_1013 aspartate carbamoyltransferase (RefSeq) 0.30 Shew_1958 orotidine 5'-phosphate decarboxylase (RefSeq) — —
Shewanella amazonensis SB2B 0.19 Sama_0840 aspartate carbamoyltransferase (RefSeq) 0.31 Sama_1740 orotidine 5'-phosphate decarboxylase (RefSeq) 0.82 4

Not shown: 35 genomes with orthologs for Atu1308 only; 0 genomes with orthologs for Atu0298 only