| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS08765 | | TolC family outer membrane protein | 1.0 | ABZR87_RS04885 | | lytic transglycosylase domain-containing protein | 0.48 | 14 |
| Ralstonia solanacearum PSI07 | 0.83 | RPSI07_RS20545 | | channel protein TolC | 0.91 | RPSI07_RS23510 | | lytic transglycosylase | 0.38 | 70 |
| Ralstonia solanacearum IBSBF1503 | 0.82 | RALBFv3_RS12715 | | channel protein TolC | 0.91 | RALBFv3_RS09860 | | lytic transglycosylase | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.82 | RS_RS03495 | | channel protein TolC | 0.91 | RS_RS00445 | | lytic transglycosylase | low | > 80 |
| Ralstonia solanacearum UW163 | 0.82 | UW163_RS00850 | | channel protein TolC | 0.91 | UW163_RS03720 | | lytic transglycosylase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.53 | RR42_RS15670 | | channel protein TolC | 0.69 | RR42_RS01405 | | lytic transglycosylase | 0.23 | 127 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.39 | H281DRAFT_00100 | | outer membrane protein | 0.50 | H281DRAFT_05816 | | soluble lytic murein transglycosylase | low | > 103 |
| Dechlorosoma suillum PS | 0.38 | Dsui_0405 | | type I secretion outer membrane protein, TolC family | 0.35 | Dsui_0683 | | soluble lytic murein transglycosylase-like protein | low | > 51 |
| Variovorax sp. OAS795 | 0.32 | ABID97_RS21375 | | TolC family outer membrane protein | 0.31 | ABID97_RS06595 | | transglycosylase SLT domain-containing protein | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF5765 | | Type I secretion outer membrane protein, TolC precursor | 0.31 | GFF1614 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | 0.40 | 77 |
| Variovorax sp. SCN45 | 0.30 | GFF6530 | | Type I secretion outer membrane protein, TolC family | 0.31 | GFF5163 | | Soluble lytic murein transglycosylase (EC 4.2.2.n1) | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.30 | Ac3H11_2219 | | Type I secretion outer membrane protein, TolC precursor | 0.33 | Ac3H11_1834 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | low | > 79 |
| Pseudomonas fluorescens FW300-N2C3 | 0.25 | AO356_08815 | | channel protein TolC | 0.17 | AO356_02350 | | lytic transglycosylase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.25 | Pf6N2E2_3645 | | Type I secretion outer membrane protein, TolC precursor | 0.16 | Pf6N2E2_2294 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.25 | Pf1N1B4_1448 | | Type I secretion outer membrane protein, TolC precursor | 0.16 | Pf1N1B4_3898 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | 0.31 | 59 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.24 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | 0.16 | Psyr_3295 | | SLT | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.24 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | 0.16 | Psyr_3295 | | SLT | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_188 | | Type I secretion outer membrane protein, TolC precursor | 0.17 | PfGW456L13_4045 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.24 | AO353_13005 | | channel protein TolC | 0.17 | AO353_00530 | | lytic transglycosylase | low | > 101 |
| Pseudomonas sp. RS175 | 0.24 | PFR28_05090 | | Outer membrane protein TolC | 0.17 | PFR28_01106 | | Soluble lytic murein transglycosylase | low | > 88 |
| Dyella japonica UNC79MFTsu3.2 | 0.24 | ABZR86_RS17210 | | TolC family outer membrane protein | 0.15 | ABZR86_RS12745 | | transglycosylase SLT domain-containing protein | low | > 74 |
| Pseudomonas simiae WCS417 | 0.24 | PS417_02350 | | channel protein TolC | 0.16 | PS417_07550 | | lytic transglycosylase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.24 | PFLU_RS02425 | | TolC family outer membrane protein | 0.16 | PFLU_RS07630 | | transglycosylase SLT domain-containing protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.24 | PFLU_RS02425 | | TolC family outer membrane protein | 0.16 | PFLU_RS07630 | | transglycosylase SLT domain-containing protein | low | > 109 |
| Pseudomonas putida KT2440 | 0.23 | PP_4923 | | Outer membrane efflux protein | 0.16 | PP_2130 | | putative Soluble lytic transglycosylase | 0.19 | 48 |
| Kangiella aquimarina DSM 16071 | 0.23 | B158DRAFT_0973 | | type I secretion outer membrane protein, TolC family | 0.11 | B158DRAFT_1444 | | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) | low | > 40 |
| Lysobacter sp. OAE881 | 0.23 | ABIE51_RS17615 | | TolC family outer membrane protein | 0.14 | ABIE51_RS19070 | | transglycosylase SLT domain-containing protein | low | > 62 |
| Pseudomonas sp. S08-1 | 0.23 | OH686_15890 | | Outer membrane channel TolC (OpmH) | 0.16 | OH686_21900 | | Soluble lytic murein transglycosylase | 0.77 | 42 |
| Pseudomonas stutzeri RCH2 | 0.23 | Psest_0476 | | type I secretion outer membrane protein, TolC family | 0.15 | Psest_1844 | | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) | low | > 67 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.22 | Xcc-8004.1042.1 | | Type I secretion outer membrane protein, TolC precursor | 0.15 | Xcc-8004.961.1 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | — | — |
| Rhodanobacter denitrificans MT42 | 0.22 | LRK55_RS06430 | | TolC family outer membrane protein | 0.15 | LRK55_RS06980 | | transglycosylase SLT domain-containing protein | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.22 | OKGIIK_16950 | tolC | Outer membrane protein TolC | 0.15 | OKGIIK_16395 | | Lytic transglycosylase | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.22 | LRK54_RS06685 | | TolC family outer membrane protein | 0.15 | LRK54_RS07245 | | transglycosylase SLT domain-containing protein | low | > 59 |
| Erwinia tracheiphila SCR3 | 0.22 | LU632_RS20635 | tolC | outer membrane channel protein TolC | 0.12 | LU632_RS02575 | sltY | murein transglycosylase | — | — |
| Alteromonas macleodii MIT1002 | 0.22 | MIT1002_00670 | | Outer membrane protein TolC precursor | 0.11 | MIT1002_00576 | | Soluble lytic murein transglycosylase precursor | low | > 70 |
| Shewanella sp. ANA-3 | 0.21 | Shewana3_0725 | tolC | outer membrane channel protein (RefSeq) | 0.12 | Shewana3_2236 | | lytic transglycosylase, catalytic (RefSeq) | low | > 73 |
| Escherichia coli BW25113 | 0.21 | b3035 | tolC | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | 0.12 | b4392 | slt | soluble lytic murein transglycosylase (VIMSS) | low | > 76 |
| Escherichia coli ECRC62 | 0.21 | BNILDI_00905 | tolC | outer membrane channel protein TolC | 0.12 | BNILDI_08095 | sltY | murein transglycosylase | low | > 75 |
| Dickeya dadantii 3937 | 0.21 | DDA3937_RS01740 | | outer membrane channel protein TolC | 0.12 | DDA3937_RS18455 | | murein transglycosylase | low | > 74 |
| Escherichia coli ECOR38 | 0.21 | HEPCGN_17680 | tolC | outer membrane channel protein TolC | 0.12 | HEPCGN_09175 | sltY | murein transglycosylase | low | > 87 |
| Dickeya dianthicola 67-19 | 0.21 | HGI48_RS01635 | | outer membrane channel protein TolC | 0.12 | HGI48_RS18385 | | murein transglycosylase | low | > 71 |
| Escherichia coli BL21 | 0.21 | ECD_02907 | | transport channel | 0.11 | ECD_04268 | | lytic murein transglycosylase, soluble | low | > 61 |
| Escherichia coli ECOR27 | 0.21 | NOLOHH_10610 | tolC | outer membrane channel protein TolC | 0.12 | NOLOHH_03500 | sltY | murein transglycosylase | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.21 | OHPLBJKB_00668 | | Outer membrane protein TolC | 0.12 | OHPLBJKB_03669 | | Soluble lytic murein transglycosylase | low | > 73 |
| Pantoea sp. MT58 | 0.21 | IAI47_03135 | | outer membrane channel protein TolC | 0.13 | IAI47_16260 | | murein transglycosylase | low | > 76 |
| Dickeya dianthicola ME23 | 0.21 | DZA65_RS01710 | | outer membrane channel protein TolC | 0.11 | DZA65_RS19525 | | murein transglycosylase | low | > 75 |
| Escherichia coli ECRC99 | 0.21 | KEDOAH_09340 | tolC | outer membrane channel protein TolC | 0.12 | KEDOAH_16985 | sltY | murein transglycosylase | — | — |
| Escherichia coli ECRC100 | 0.21 | OKFHMN_18805 | tolC | outer membrane channel protein TolC | 0.12 | OKFHMN_11170 | sltY | murein transglycosylase | low | > 80 |
| Escherichia coli Nissle 1917 | 0.21 | ECOLIN_RS17515 | | outer membrane channel protein TolC | 0.12 | ECOLIN_RS25210 | | murein transglycosylase | low | > 55 |
| Escherichia coli ECRC101 | 0.21 | MCAODC_09320 | tolC | outer membrane channel protein TolC | 0.12 | MCAODC_01685 | sltY | murein transglycosylase | low | > 87 |
| Escherichia coli ECRC98 | 0.21 | JDDGAC_22440 | tolC | outer membrane channel protein TolC | 0.12 | JDDGAC_14765 | sltY | murein transglycosylase | low | > 86 |
| Escherichia coli ECRC102 | 0.21 | NIAGMN_16570 | tolC | outer membrane channel protein TolC | 0.12 | NIAGMN_09020 | sltY | murein transglycosylase | — | — |
| Escherichia fergusonii Becca | 0.21 | EFB2_00773 | | Outer membrane protein TolC | 0.12 | EFB2_04052 | | Soluble lytic murein transglycosylase | low | > 86 |
| Vibrio cholerae E7946 ATCC 55056 | 0.21 | CSW01_12335 | | outer membrane protein TolC | 0.12 | CSW01_03655 | | murein transglycosylase | low | > 62 |
| Pectobacterium carotovorum WPP14 | 0.20 | HER17_RS14085 | | TolC family outer membrane protein | 0.12 | HER17_RS02750 | | murein transglycosylase | low | > 75 |
| Shewanella oneidensis MR-1 | 0.20 | SO3904 | tolC | outer membrane protein TolC (NCBI ptt file) | 0.12 | SO2040 | | soluble lytic murein transglycosylase, putative (NCBI ptt file) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.20 | GFF3149 | | Type I secretion outer membrane protein, TolC precursor | 0.12 | GFF1060 | | Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) | low | > 78 |
| Klebsiella michiganensis M5al | 0.20 | BWI76_RS24400 | | outer membrane channel protein TolC | 0.12 | BWI76_RS04185 | | murein transglycosylase | low | > 92 |
| Enterobacter sp. TBS_079 | 0.19 | MPMX20_03882 | | Outer membrane protein TolC | 0.12 | MPMX20_00699 | | Soluble lytic murein transglycosylase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.19 | EX28DRAFT_3073 | | type I secretion outer membrane protein, TolC family | 0.13 | EX28DRAFT_3602 | | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) | low | > 76 |
| Rahnella sp. WP5 | 0.19 | EX31_RS08100 | | outer membrane channel protein TolC | 0.12 | EX31_RS03985 | | murein transglycosylase | low | > 89 |
| Serratia liquefaciens MT49 | 0.18 | IAI46_21945 | | outer membrane channel protein TolC | 0.12 | IAI46_02985 | | murein transglycosylase | low | > 86 |
| Shewanella amazonensis SB2B | 0.18 | Sama_3048 | tolC | outer membrane channel protein (RefSeq) | 0.10 | Sama_1895 | | soluble lytic murein transglycosylase, putative (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.18 | Shew_0544 | tolC | outer membrane channel protein (RefSeq) | 0.11 | Shew_2125 | | lytic transglycosylase, catalytic (RefSeq) | low | > 60 |
| Acinetobacter radioresistens SK82 | 0.16 | MPMX26_00182 | | Outer membrane protein TolC | 0.18 | MPMX26_02666 | | Soluble lytic murein transglycosylase | low | > 36 |
| Paraburkholderia graminis OAS925 | 0.07 | ABIE53_004979 | | outer membrane protein | 0.51 | ABIE53_000044 | | soluble lytic murein transglycosylase | low | > 113 |
Not shown: 17 genomes with orthologs for ABZR87_RS08765 only; 4 genomes with orthologs for ABZR87_RS04885 only