Conservation of cofitness between ABZR86_RS08080 and ABZR86_RS11895 in Dyella japonica UNC79MFTsu3.2

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dyella japonica UNC79MFTsu3.2 1.0 ABZR86_RS08080 transcription elongation factor GreB 1.0 ABZR86_RS11895 YicC/YloC family endoribonuclease 0.45 17
Rhodanobacter denitrificans FW104-10B01 0.83 LRK54_RS01765 transcription elongation factor GreB 0.79 LRK54_RS11750 YicC family protein low > 59
Rhodanobacter denitrificans MT42 0.82 LRK55_RS01545 transcription elongation factor GreB 0.79 LRK55_RS11475 YicC family protein low > 63
Rhodanobacter sp. FW510-T8 0.81 OKGIIK_04765 greB transcription elongation factor GreB 0.77 OKGIIK_12145 yicC YicC-like family, N-terminal region — —
Lysobacter sp. OAE881 0.74 ABIE51_RS08175 transcription elongation factor GreB 0.64 ABIE51_RS17280 YicC/YloC family endoribonuclease low > 62
Xanthomonas campestris pv. campestris strain 8004 0.72 Xcc-8004.1941.1 Transcription elongation factor GreB 0.61 Xcc-8004.1220.1 Protein YicC low > 74
Pseudomonas stutzeri RCH2 0.53 Psest_2339 transcription elongation factor GreB 0.41 Psest_3814 TIGR00255 family protein — —
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_1929 transcription elongation factor GreB 0.42 B158DRAFT_0582 TIGR00255 family protein low > 40
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_2216 Transcription elongation factor GreB 0.42 PfGW456L13_783 Protein YicC low > 87
Pseudomonas sp. S08-1 0.52 OH686_01805 transcription elongation factor GreB 0.43 OH686_13565 UPF0701 protein YicC low > 80
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_03240 transcription elongation factor GreB 0.41 AO356_12495 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_18990 transcription elongation factor GreB 0.41 AO353_09265 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_2479 Transcription elongation factor GreB 0.42 Pf6N2E2_4364 Protein YicC low > 103
Pseudomonas sp. RS175 0.50 PFR28_00955 Transcription elongation factor GreB 0.41 PFR28_04421 hypothetical protein — —
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_13700 transcription elongation factor GreB 0.39 CSW01_01110 YicC family protein low > 62
Shewanella amazonensis SB2B 0.48 Sama_3509 GreA/GreB family elongation factor (RefSeq) 0.43 Sama_0319 hypothetical protein (RefSeq) low > 62
Enterobacter sp. TBS_079 0.47 MPMX20_04293 Transcription elongation factor GreB 0.43 MPMX20_00091 hypothetical protein low > 85
Pseudomonas putida KT2440 0.47 PP_2315 Transcription elongation factor GreB 0.42 PP_5295 conserved protein of unknown function low > 96
Klebsiella michiganensis M5al 0.47 BWI76_RS26660 transcription elongation factor GreB 0.44 BWI76_RS27395 hypothetical protein low > 92
Shewanella loihica PV-4 0.47 Shew_3636 transcription elongation factor GreB (RefSeq) 0.43 Shew_3489 hypothetical protein (RefSeq) low > 60
Enterobacter asburiae PDN3 0.47 EX28DRAFT_4137 transcription elongation factor GreB 0.42 EX28DRAFT_3894 TIGR00255 family protein low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_2065 transcription elongation factor GreB 0.43 Psyr_0212 Conserved hypothetical protein 255 low > 86
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_2065 transcription elongation factor GreB 0.43 Psyr_0212 Conserved hypothetical protein 255 low > 86
Pantoea sp. MT58 0.46 IAI47_01810 transcription elongation factor GreB 0.43 IAI47_00580 YicC family protein low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF612 Transcription elongation factor GreB 0.42 GFF365 Protein YicC low > 78
Pectobacterium carotovorum WPP14 0.46 HER17_RS01650 transcription elongation factor GreB 0.42 HER17_RS20905 YicC family protein low > 75
Pseudomonas simiae WCS417 0.46 PS417_08390 transcription elongation factor GreB 0.41 PS417_27815 hypothetical protein low > 88
Escherichia coli ECOR27 0.46 NOLOHH_08820 greB transcription elongation factor GreB 0.42 NOLOHH_07465 yicC UPF0701 protein YicC low > 75
Escherichia coli ECRC99 0.46 KEDOAH_11110 greB transcription elongation factor GreB 0.42 KEDOAH_12560 yicC UPF0701 protein YicC — —
Pseudomonas fluorescens SBW25 0.46 PFLU_RS08340 transcription elongation factor GreB 0.41 PFLU_RS29495 YicC family protein low > 109
Escherichia coli BW25113 0.46 b3406 greB transcription elongation factor GreB (NCBI) 0.42 b3644 yicC hypothetical protein (NCBI) low > 76
Escherichia fergusonii Becca 0.46 EFB2_00422 Transcription elongation factor GreB 0.41 EFB2_00169 hypothetical protein low > 86
Escherichia coli ECRC100 0.46 OKFHMN_17030 greB transcription elongation factor GreB 0.42 OKFHMN_15585 yicC UPF0701 protein YicC low > 80
Escherichia coli ECRC101 0.46 MCAODC_07560 greB transcription elongation factor GreB 0.42 MCAODC_06095 yicC UPF0701 protein YicC low > 87
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS08340 transcription elongation factor GreB 0.41 PFLU_RS29495 YicC family protein low > 109
Escherichia coli ECRC62 0.46 BNILDI_02700 greB transcription elongation factor GreB 0.42 BNILDI_04050 yicC UPF0701 protein YicC low > 75
Escherichia coli ECOR38 0.46 HEPCGN_15840 greB transcription elongation factor GreB 0.42 HEPCGN_14405 yicC UPF0701 protein YicC low > 87
Escherichia coli ECRC102 0.46 NIAGMN_14800 greB transcription elongation factor GreB 0.42 NIAGMN_13345 yicC UPF0701 protein YicC — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS19460 transcription elongation factor GreB 0.42 ECOLIN_RS20760 YicC/YloC family endoribonuclease low > 55
Escherichia coli ECRC98 0.46 JDDGAC_20660 greB transcription elongation factor GreB 0.42 JDDGAC_19210 yicC UPF0701 protein YicC low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00297 Transcription elongation factor GreB 0.42 OHPLBJKB_00058 hypothetical protein 0.64 12
Shewanella sp. ANA-3 0.46 Shewana3_4014 transcription elongation factor GreB (RefSeq) 0.43 Shewana3_3778 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.46 SO4631 greB transcription elongation factor GreB (NCBI ptt file) 0.43 SO4257 conserved hypothetical protein TIGR00255 (NCBI ptt file) low > 76
Rahnella sp. WP5 0.46 EX31_RS04835 transcription elongation factor GreB 0.42 EX31_RS14510 YicC family protein low > 89
Erwinia tracheiphila SCR3 0.46 LU632_RS22950 greB transcription elongation factor GreB 0.41 LU632_RS22050 YicC family protein low > 74
Escherichia coli BL21 0.46 ECD_03258 transcript cleavage factor 0.42 ECD_03501 UPF0701 family protein low > 61
Serratia liquefaciens MT49 0.45 IAI46_23795 transcription elongation factor GreB 0.43 IAI46_24855 YicC family protein low > 86
Dickeya dadantii 3937 0.44 DDA3937_RS19625 transcription elongation factor GreB 0.41 DDA3937_RS20645 YicC family protein low > 74
Dickeya dianthicola 67-19 0.44 HGI48_RS19755 transcription elongation factor GreB 0.41 HGI48_RS00540 YicC family protein low > 71
Dickeya dianthicola ME23 0.44 DZA65_RS20845 transcription elongation factor GreB 0.41 DZA65_RS00575 YicC family protein low > 75
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_298 Transcription elongation factor GreB 0.40 Pf1N1B4_2116 Protein YicC — —
Marinobacter adhaerens HP15 0.44 HP15_3481 transcription elongation factor GreB 0.40 HP15_301 conserved hypothetical protein low > 73
Alteromonas macleodii MIT1002 0.42 MIT1002_04011 Transcript cleavage factor GreB 0.38 MIT1002_04072 hypothetical protein low > 70
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS15215 transcription elongation factor GreB 0.34 ABZR87_RS15240 YicC/YloC family endoribonuclease low > 80
Ralstonia solanacearum UW163 0.36 UW163_RS10420 transcription elongation factor GreB 0.35 UW163_RS10390 YicC family protein — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS03305 transcription elongation factor GreB 0.35 RALBFv3_RS03330 YicC family protein low > 76
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS15285 transcription elongation factor GreB 0.34 BPHYT_RS15320 hypothetical protein low > 109
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS04925 transcription elongation factor GreB 0.36 RR42_RS04905 hypothetical protein — —
Ralstonia solanacearum PSI07 0.35 RPSI07_RS13880 transcription elongation factor GreB 0.35 RPSI07_RS13855 YicC family protein low > 81
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS10615 transcription elongation factor GreB 0.36 HSERO_RS10650 hypothetical protein low > 78
Azospirillum sp. SherDot2 0.35 MPMX19_00337 Transcription elongation factor GreB 0.27 MPMX19_00983 hypothetical protein — —
Paraburkholderia graminis OAS925 0.35 ABIE53_003228 transcription elongation factor GreB 0.35 ABIE53_003233 uncharacterized protein (TIGR00255 family) low > 113
Ralstonia solanacearum GMI1000 0.35 RS_RS10790 transcription elongation factor GreB 0.35 RS_RS10815 YicC family protein — —
Magnetospirillum magneticum AMB-1 0.33 AMB_RS22350 transcription elongation factor GreB 0.28 AMB_RS03835 YicC family protein low > 64
Variovorax sp. SCN45 0.33 GFF2374 Transcription elongation factor GreB 0.27 GFF2378 UPF0701 protein YicC — —
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS04145 transcription elongation factor GreA 0.24 ABI39_RS08135 YicC family protein low > 72
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_03870 transcription elongation factor GreA 0.23 CA264_14585 YicC family protein low > 74

Not shown: 2 genomes with orthologs for ABZR86_RS08080 only; 30 genomes with orthologs for ABZR86_RS11895 only