| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Brevundimonas sp. GW460-12-10-14-LB2 | 1.0 | A4249_RS03600 | | LacI family DNA-binding transcriptional regulator | 1.0 | A4249_RS12510 | | phosphoenolpyruvate carboxylase | 0.57 | 7 |
| Lysobacter sp. OAE881 | 0.42 | ABIE51_RS08800 | | LacI family DNA-binding transcriptional regulator | 0.24 | ABIE51_RS18965 | | phosphoenolpyruvate carboxylase | low | > 62 |
| Rhodanobacter sp. FW510-T8 | 0.42 | OKGIIK_15435 | | LacI family transcriptional regulator | 0.24 | OKGIIK_11820 | ppc | phosphoenolpyruvate carboxylase | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.42 | ABZR86_RS14885 | | LacI family DNA-binding transcriptional regulator | 0.24 | ABZR86_RS11555 | | phosphoenolpyruvate carboxylase | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.41 | LRK55_RS08435 | | LacI family DNA-binding transcriptional regulator | 0.23 | LRK55_RS11810 | | phosphoenolpyruvate carboxylase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.41 | LRK54_RS08670 | | LacI family transcriptional regulator | 0.23 | LRK54_RS12075 | | phosphoenolpyruvate carboxylase | low | > 59 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.39 | Xcc-8004.2362.1 | | Transcriptional regulator, LacI family | 0.26 | Xcc-8004.4314.1 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 74 |
| Sphingomonas koreensis DSMZ 15582 | 0.38 | Ga0059261_2309 | | transcriptional regulator, LacI family | 0.44 | Ga0059261_2719 | | Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) | low | > 68 |
| Pectobacterium carotovorum WPP14 | 0.26 | HER17_RS03725 | | LacI family DNA-binding transcriptional regulator | 0.22 | HER17_RS20655 | | phosphoenolpyruvate carboxylase | low | > 75 |
| Escherichia coli ECOR38 | 0.25 | HEPCGN_22795 | galS | HTH-type transcriptional regulator GalS | 0.22 | HEPCGN_12240 | ppc | phosphoenolpyruvate carboxylase | low | > 87 |
| Escherichia coli BL21 | 0.25 | ECD_02080 | | galactose- and fucose-inducible galactose regulon transcriptional isorepressor; mgl operon transcriptional repressor; autorepressor | 0.22 | ECD_03841 | | phosphoenolpyruvate carboxylase | low | > 61 |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_15100 | galS | HTH-type transcriptional regulator GalS | 0.22 | NOLOHH_05740 | ppc | phosphoenolpyruvate carboxylase | low | > 75 |
| Dickeya dadantii 3937 | 0.25 | DDA3937_RS00055 | | ribose operon transcriptional repressor RbsR | 0.22 | DDA3937_RS20360 | | phosphoenolpyruvate carboxylase | low | > 74 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_01560 | | HTH-type transcriptional regulator GalS | 0.22 | OHPLBJKB_04094 | | Phosphoenolpyruvate carboxylase | low | > 73 |
| Escherichia coli BW25113 | 0.25 | b2151 | galS | DNA-binding transcriptional repressor (NCBI) | 0.22 | b3956 | ppc | phosphoenolpyruvate carboxylase (NCBI) | low | > 76 |
| Shewanella amazonensis SB2B | 0.25 | Sama_1400 | | periplasmic binding protein/LacI transcriptional regulator (RefSeq) | 0.24 | Sama_0254 | | phosphoenolpyruvate carboxylase (RefSeq) | low | > 62 |
| Escherichia coli ECRC99 | 0.25 | KEDOAH_04660 | galS | HTH-type transcriptional regulator GalS | 0.22 | KEDOAH_14565 | ppc | phosphoenolpyruvate carboxylase | — | — |
| Escherichia fergusonii Becca | 0.25 | EFB2_01705 | | HTH-type transcriptional regulator GalS | 0.22 | EFB2_04658 | | Phosphoenolpyruvate carboxylase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.25 | ECOLIN_RS12585 | | HTH-type transcriptional regulator GalS | 0.22 | ECOLIN_RS22835 | | phosphoenolpyruvate carboxylase | low | > 55 |
| Escherichia coli ECRC98 | 0.25 | JDDGAC_27485 | galS | HTH-type transcriptional regulator GalS | 0.22 | JDDGAC_17220 | ppc | phosphoenolpyruvate carboxylase | low | > 86 |
| Escherichia coli ECRC100 | 0.25 | OKFHMN_23525 | galS | HTH-type transcriptional regulator GalS | 0.22 | OKFHMN_13595 | ppc | phosphoenolpyruvate carboxylase | low | > 80 |
| Escherichia coli ECRC102 | 0.25 | NIAGMN_21290 | galS | HTH-type transcriptional regulator GalS | 0.22 | NIAGMN_11345 | ppc | phosphoenolpyruvate carboxylase | — | — |
| Escherichia coli ECRC101 | 0.25 | MCAODC_14575 | galS | HTH-type transcriptional regulator GalS | 0.22 | MCAODC_04095 | ppc | phosphoenolpyruvate carboxylase | low | > 87 |
| Dickeya dianthicola 67-19 | 0.25 | HGI48_RS21310 | | ribose operon transcriptional repressor RbsR | 0.22 | HGI48_RS00850 | | phosphoenolpyruvate carboxylase | low | > 71 |
| Rahnella sp. WP5 | 0.25 | EX31_RS14230 | | DNA-binding transcriptional regulator CytR | 0.22 | EX31_RS14200 | | phosphoenolpyruvate carboxylase | low | > 89 |
| Escherichia coli ECRC62 | 0.25 | BNILDI_14020 | galS | HTH-type transcriptional regulator GalS | 0.22 | BNILDI_05785 | ppc | phosphoenolpyruvate carboxylase | low | > 75 |
| Dickeya dianthicola ME23 | 0.25 | DZA65_RS18545 | | LacI family transcriptional regulator | 0.22 | DZA65_RS00895 | | phosphoenolpyruvate carboxylase | low | > 75 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.24 | Echvi_3495 | | Transcriptional regulators | 0.11 | Echvi_3727 | | Phosphoenolpyruvate carboxylase | low | > 79 |
| Caulobacter crescentus NA1000 | 0.24 | CCNA_01699 | | LacI-family transcriptional regulator | 0.34 | CCNA_01560 | | phosphoenolpyruvate carboxylase | low | > 66 |
| Enterobacter asburiae PDN3 | 0.24 | EX28DRAFT_0406 | | Transcriptional regulators | 0.22 | EX28DRAFT_4418 | | Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) | low | > 76 |
| Pseudomonas fluorescens FW300-N2E3 | 0.24 | AO353_20830 | | LacI family transcriptional regulator | 0.22 | AO353_16310 | | phosphoenolpyruvate carboxylase | low | > 101 |
| Caulobacter crescentus NA1000 Δfur | 0.24 | CCNA_01699 | | LacI-family transcriptional regulator | 0.34 | CCNA_01560 | | phosphoenolpyruvate carboxylase | low | > 67 |
| Pseudomonas fluorescens FW300-N2E2 | 0.24 | Pf6N2E2_164 | | Ribose operon repressor | 0.23 | Pf6N2E2_3103 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 103 |
| Klebsiella michiganensis M5al | 0.24 | BWI76_RS23355 | | LacI family transcriptional regulator | 0.22 | BWI76_RS00835 | | phosphoenolpyruvate carboxylase | low | > 92 |
| Pseudomonas fluorescens FW300-N2C3 | 0.24 | AO356_00955 | | LacI family transcriptional regulator | 0.22 | AO356_06185 | | phosphoenolpyruvate carboxylase | low | > 104 |
| Vibrio cholerae E7946 ATCC 55056 | 0.24 | CSW01_13525 | | DNA-binding transcriptional regulator CytR | 0.21 | CSW01_13390 | | phosphoenolpyruvate carboxylase | low | > 62 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.24 | GFF3787 | | Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator | 0.23 | GFF2342 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 78 |
| Pseudomonas syringae pv. syringae B728a | 0.24 | Psyr_2154 | | transcriptional regulator, LacI family | 0.22 | Psyr_1318 | | Phosphoenolpyruvate carboxylase | low | > 86 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.24 | GFF4454 | | Transcriptional regulator, LacI family | 0.40 | GFF115 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 90 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.24 | Psyr_2154 | | transcriptional regulator, LacI family | 0.22 | Psyr_1318 | | Phosphoenolpyruvate carboxylase | low | > 86 |
| Ralstonia solanacearum IBSBF1503 | 0.23 | RALBFv3_RS14240 | | LacI family transcriptional regulator | 0.42 | RALBFv3_RS04250 | | phosphoenolpyruvate carboxylase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.23 | UW163_RS11705 | | LacI family transcriptional regulator | 0.42 | UW163_RS09420 | | phosphoenolpyruvate carboxylase | — | — |
| Erwinia tracheiphila SCR3 | 0.23 | LU632_RS08515 | galS | HTH-type transcriptional regulator GalS | 0.22 | LU632_RS19625 | ppc | phosphoenolpyruvate carboxylase | low | > 74 |
| Pseudomonas sp. RS175 | 0.23 | PFR28_02734 | | Ribose operon repressor | 0.22 | PFR28_00368 | | Phosphoenolpyruvate carboxylase | low | > 88 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.23 | CA264_13975 | | LacI family transcriptional regulator | 0.11 | CA264_05530 | | phosphoenolpyruvate carboxylase | low | > 74 |
| Ralstonia solanacearum GMI1000 | 0.23 | RS_RS05020 | | LacI family transcriptional regulator | 0.41 | RS_RS11840 | | phosphoenolpyruvate carboxylase | low | > 80 |
| Enterobacter sp. TBS_079 | 0.23 | MPMX20_03121 | | HTH-type transcriptional regulator GalS | 0.22 | MPMX20_04524 | | Phosphoenolpyruvate carboxylase | low | > 85 |
| Pseudomonas fluorescens FW300-N1B4 | 0.23 | Pf1N1B4_6032 | | Ribose operon repressor | 0.22 | Pf1N1B4_3051 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 87 |
| Ralstonia solanacearum PSI07 | 0.23 | RPSI07_RS19225 | | LacI family transcriptional regulator | 0.41 | RPSI07_RS13100 | | phosphoenolpyruvate carboxylase | low | > 81 |
| Alteromonas macleodii MIT1002 | 0.23 | MIT1002_04103 | | Galactose operon repressor | 0.19 | MIT1002_03491 | | Phosphoenolpyruvate carboxylase | low | > 70 |
| Ralstonia sp. UNC404CL21Col | 0.23 | ABZR87_RS09955 | | LacI family DNA-binding transcriptional regulator | 0.42 | ABZR87_RS16140 | | phosphoenolpyruvate carboxylase | low | > 80 |
| Pantoea sp. MT58 | 0.23 | IAI47_10795 | | HTH-type transcriptional repressor PurR | 0.22 | IAI47_00895 | | phosphoenolpyruvate carboxylase | low | > 76 |
| Pseudomonas fluorescens SBW25-INTG | 0.22 | PFLU_RS20365 | | LacI family DNA-binding transcriptional regulator | 0.23 | PFLU_RS06130 | | phosphoenolpyruvate carboxylase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.22 | PFLU_RS20365 | | LacI family DNA-binding transcriptional regulator | 0.23 | PFLU_RS06130 | | phosphoenolpyruvate carboxylase | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.22 | HSERO_RS11495 | | LacI family transcription regulator | 0.41 | HSERO_RS14670 | | phosphoenolpyruvate carboxylase | low | > 78 |
| Pseudomonas fluorescens GW456-L13 | 0.22 | PfGW456L13_3909 | | Ribose operon repressor | 0.23 | PfGW456L13_4740 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 87 |
| Paraburkholderia sabiae LMG 24235 | 0.22 | QEN71_RS07355 | | LacI family DNA-binding transcriptional regulator | 0.41 | QEN71_RS24955 | | phosphoenolpyruvate carboxylase | low | > 153 |
| Azospirillum sp. SherDot2 | 0.22 | MPMX19_03117 | | Catabolite control protein A | 0.43 | MPMX19_06050 | | Phosphoenolpyruvate carboxylase | low | > 112 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.22 | ABZR88_RS10530 | | LacI family DNA-binding transcriptional regulator | 0.12 | ABZR88_RS09465 | | phosphoenolpyruvate carboxylase | — | — |
| Variovorax sp. OAS795 | 0.22 | ABID97_RS24770 | | LacI family DNA-binding transcriptional regulator | 0.40 | ABID97_RS08220 | | phosphoenolpyruvate carboxylase | low | > 91 |
| Variovorax sp. SCN45 | 0.21 | GFF2137 | | Ribose operon repressor | 0.40 | GFF3838 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 127 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.21 | CA265_RS06750 | | LacI family transcriptional regulator | 0.12 | CA265_RS21350 | | phosphoenolpyruvate carboxylase | low | > 88 |
| Pseudomonas putida KT2440 | 0.21 | PP_2457 | | DNA-binding transcriptional repressor | 0.23 | PP_1505 | | Phosphoenolpyruvate carboxylase | low | > 96 |
| Paraburkholderia graminis OAS925 | 0.21 | ABIE53_002322 | | LacI family transcriptional regulator | 0.41 | ABIE53_001314 | | phosphoenolpyruvate carboxylase | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.21 | H281DRAFT_05228 | | transcriptional regulator, LacI family | 0.41 | H281DRAFT_00197 | | Phosphoenolpyruvate carboxylase, type 1 | low | > 103 |
| Bifidobacterium breve UCC2003 | 0.20 | BBR_RS13080 | | LacI family DNA-binding transcriptional regulator | 0.19 | BBR_RS10525 | | phosphoenolpyruvate carboxylase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.19 | RR42_RS27820 | | GntR family transcriptional regulator | 0.41 | RR42_RS15905 | | phosphoenolpyruvate carboxylase | low | > 128 |
| Pseudomonas stutzeri RCH2 | 0.16 | Psest_2126 | | Transcriptional regulators | 0.23 | Psest_1557 | | Phosphoenolpyruvate carboxylase | low | > 67 |
Not shown: 9 genomes with orthologs for A4249_RS03600 only; 14 genomes with orthologs for A4249_RS12510 only