| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Shewanella loihica PV-4 | 1.0 | Shew_1050 | | sigma E regulatory protein, MucB/RseB (RefSeq) | 1.0 | Shew_3499 | | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) | 0.50 | 4 |
| Shewanella sp. ANA-3 | 0.73 | Shewana3_3030 | | sigma E regulatory protein, MucB/RseB (RefSeq) | 0.91 | Shewana3_3812 | | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.73 | SO1344 | rseB | sigma-E factor regulatory protein RseB (NCBI ptt file) | 0.91 | SO0359 | spoT | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.67 | Sama_0876 | | putative sigma E regulatory protein, MucB/RseB (RefSeq) | 0.88 | Sama_0264 | | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.26 | CSW01_12475 | | sigma-E factor regulatory protein RseB | 0.71 | CSW01_13675 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.25 | GFF2109 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.71 | GFF357 | | 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 | low | > 78 |
| Enterobacter sp. TBS_079 | 0.25 | MPMX20_03442 | | Sigma-E factor regulatory protein RseB | 0.71 | MPMX20_00086 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | low | > 85 |
| Enterobacter asburiae PDN3 | 0.25 | EX28DRAFT_0074 | | sigma E regulatory protein, MucB/RseB | 0.71 | EX28DRAFT_3899 | | (p)ppGpp synthetase, RelA/SpoT family | low | > 76 |
| Klebsiella michiganensis M5al | 0.25 | BWI76_RS21345 | | sigma-E factor regulatory protein RseB | 0.70 | BWI76_RS27430 | | (p)ppGpp synthetase | low | > 92 |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_13060 | rseB | sigma-E factor regulatory protein RseB | 0.71 | NOLOHH_07435 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 76 |
| Escherichia coli ECRC101 | 0.25 | MCAODC_11915 | rseB | sigma-E factor regulatory protein RseB | 0.71 | MCAODC_06065 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 87 |
| Klebsiella pneumoniae MKP103 | 0.25 | KDGMDA_28470 | | sigma-E factor regulatory protein RseB | 0.70 | KDGMDA_08125 | | bifunctional GTP diphosphokinase/guanosine-3' 5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 95 |
| Escherichia coli ECRC98 | 0.25 | JDDGAC_25050 | rseB | sigma-E factor regulatory protein RseB | 0.71 | JDDGAC_19180 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 87 |
| Escherichia coli BL21 | 0.25 | ECD_02465 | | anti-sigma E factor, binds RseA | 0.71 | ECD_03507 | | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 61 |
| Escherichia coli ECOR38 | 0.25 | HEPCGN_20530 | rseB | sigma-E factor regulatory protein RseB | 0.71 | HEPCGN_14375 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 88 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_01136 | | Sigma-E factor regulatory protein RseB | 0.71 | OHPLBJKB_00051 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | low | > 74 |
| Escherichia coli ECRC99 | 0.25 | KEDOAH_06835 | rseB | sigma-E factor regulatory protein RseB | 0.71 | KEDOAH_12590 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Escherichia coli Nissle 1917 | 0.25 | ECOLIN_RS14550 | | sigma-E factor regulatory protein RseB | 0.71 | ECOLIN_RS20790 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 55 |
| Escherichia coli BW25113 | 0.25 | b2571 | rseB | periplasmic negative regulator of sigmaE (NCBI) | 0.71 | b3650 | spoT | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.25 | BNILDI_11860 | rseB | sigma-E factor regulatory protein RseB | 0.71 | BNILDI_04080 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 75 |
| Escherichia coli ECRC102 | 0.25 | NIAGMN_19155 | rseB | sigma-E factor regulatory protein RseB | 0.71 | NIAGMN_13315 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 80 |
| Escherichia coli ECRC100 | 0.25 | OKFHMN_21385 | rseB | sigma-E factor regulatory protein RseB | 0.71 | OKFHMN_15555 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 79 |
| Escherichia fergusonii Becca | 0.25 | EFB2_01325 | | Sigma-E factor regulatory protein RseB | 0.71 | EFB2_00138 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | low | > 86 |
| Erwinia amylovora T8 | 0.25 | OLJFJH_10225 | | sigma-E factor regulatory protein RseB | 0.70 | OLJFJH_05560 | | bifunctional GTP diphosphokinase/guanosine-3' 5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 58 |
| Erwinia tracheiphila HP pepo 2.2 | 0.25 | IJEDHG_01225 | rseB | sigma-E factor regulatory protein RseB | 0.69 | IJEDHG_08355 | spoT | bifunctional GTP diphosphokinase/guanosine-3' 5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.24 | LU632_RS15415 | rseB | sigma-E factor regulatory protein RseB | 0.69 | LU632_RS22200 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 73 |
| Pantoea sp. MT58 | 0.23 | IAI47_04860 | | sigma-E factor regulatory protein RseB | 0.71 | IAI47_00510 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 76 |
| Serratia liquefaciens MT49 | 0.23 | IAI46_19575 | | sigma-E factor regulatory protein RseB | 0.70 | IAI46_24895 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 87 |
| Rahnella sp. WP5 | 0.23 | EX31_RS21810 | | sigma-E factor regulatory protein RseB | 0.71 | EX31_RS15810 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 89 |
| Pantoea agglomerans CFBP13505 P0401 | 0.23 | PagCFBP13505_RS14750 | | sigma-E factor regulatory protein RseB | 0.71 | PagCFBP13505_RS18835 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 74 |
| Dickeya dianthicola ME23 | 0.22 | DZA65_RS16920 | | sigma-E factor regulatory protein RseB | 0.71 | DZA65_RS22150 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Dickeya dianthicola 67-19 | 0.22 | HGI48_RS15840 | | sigma-E factor regulatory protein RseB | 0.71 | HGI48_RS21180 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Pectobacterium carotovorum WPP14 | 0.21 | HER17_RS05790 | | sigma-E factor regulatory protein RseB | 0.70 | HER17_RS21385 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 75 |
| Dickeya dadantii 3937 | 0.21 | DDA3937_RS15755 | | sigma-E factor regulatory protein RseB | 0.69 | DDA3937_RS00180 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Pseudomonas lactucae CFBP13502 | 0.15 | GEMAOFIL_01574 | | Sigma factor AlgU regulatory protein MucB | 0.57 | GEMAOFIL_00034 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | — | — |
| Pseudomonas fluorescens SBW25 | 0.15 | PFLU_RS07240 | | sigma factor AlgU regulatory protein MucB | 0.56 | PFLU_RS29510 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.15 | PFLU_RS07240 | | sigma factor AlgU regulatory protein MucB | 0.56 | PFLU_RS29510 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Pseudomonas putida KT2440 | 0.15 | PP_1429 | | Sigma factor AlgU regulatory protein MucB | 0.57 | PP_5302 | | bifunctional (p)ppGpp synthase/hydrolase | — | — |
| Pseudomonas stutzeri RCH2 | 0.15 | Psest_3098 | | Negative regulator of sigma E activity | 0.54 | Psest_3817 | | (p)ppGpp synthetase, RelA/SpoT family | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.14 | Pf1N1B4_3325 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.56 | Pf1N1B4_2113 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Pseudomonas sp. DMC3 | 0.14 | GFF2279 | | Sigma factor AlgU regulatory protein MucB | 0.56 | GFF419 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | — | — |
| Pseudomonas simiae WCS417 | 0.14 | PS417_07130 | | RNA polymerase sigma-H factor AlgU | 0.56 | PS417_27830 | | (p)ppGpp synthetase | — | — |
| Pseudomonas sp. S08-1 | 0.14 | OH686_20055 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.56 | OH686_13550 | | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase / GTP pyrophosphokinase , (p)ppGpp synthetase II | — | — |
| Pseudomonas sp. SVBP6 | 0.14 | COO64_RS16535 | | MucB/RseB C-terminal domain-containing protein | 0.57 | COO64_RS01555 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Pseudomonas sp. BP01 | 0.14 | JOY50_RS14675 | | MucB/RseB C-terminal domain-containing protein | 0.57 | JOY50_RS08985 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 84 |
| Paraburkholderia sabiae LMG 24235 | 0.14 | QEN71_RS04585 | | MucB/RseB C-terminal domain-containing protein | 0.47 | QEN71_RS03665 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 153 |
| Pseudomonas fluorescens FW300-N2E3 | 0.14 | AO353_17635 | | RNA polymerase subunit sigma | 0.57 | AO353_09280 | | (p)ppGpp synthetase | — | — |
| Pseudomonas aeruginosa PA14 | 0.13 | IKLFDK_03275 | | sigma factor AlgU regulator MucB | 0.57 | IKLFDK_26765 | | bifunctional GTP diphosphokinase/guanosine-3' 5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.13 | PfGW456L13_4514 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.56 | PfGW456L13_780 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Pseudomonas sp. RS175 | 0.13 | PFR28_00692 | | Sigma factor AlgU regulatory protein MucB | 0.56 | PFR28_04424 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.13 | DQ20_RS44170 | mucB;inference=COORDINATES | sigma factor AlgU regulator MucB | 0.57 | DQ20_RS49545 | spoT;go_function=GTP | bifunctional GTP diphosphokinase/guanosine-3' 5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.13 | DY961_RS08680 | mucB;inference=COORDINATES | sigma factor AlgU regulator MucB | 0.57 | DY961_RS12580 | spoT;go_function=GTP | bifunctional GTP diphosphokinase/guanosine-3' 5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.12 | H281DRAFT_04357 | | sigma E regulatory protein, MucB/RseB | 0.48 | H281DRAFT_04004 | | (p)ppGpp synthetase I, SpoT/RelA | low | > 103 |
| Pseudomonas fluorescens FW300-N2E2 | 0.12 | Pf6N2E2_2754 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.56 | Pf6N2E2_4361 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Marinobacter adhaerens HP15 | 0.12 | HP15_777 | | sigma E regulatory protein, MucB/RseB | 0.52 | HP15_305 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.12 | AO356_04565 | | RNA polymerase subunit sigma | 0.56 | AO356_12480 | | (p)ppGpp synthetase | — | — |
| Pseudomonas segetis P6 | 0.12 | ACVTMO_RS06950 | | MucB/RseB C-terminal domain-containing protein | 0.57 | ACVTMO_RS00180 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Paraburkholderia graminis OAS925 | 0.12 | ABIE53_003041 | | sigma-E factor negative regulatory protein RseB | 0.48 | ABIE53_003230 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 113 |
| Herbaspirillum seropedicae SmR1 | 0.12 | HSERO_RS09635 | | transcriptional regulator | 0.45 | HSERO_RS10635 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Burkholderia phytofirmans PsJN | 0.12 | BPHYT_RS14395 | | sugar dehydratase | 0.48 | BPHYT_RS15305 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 109 |
| Castellaniella sp019104865 MT123 | 0.11 | ABCV34_RS08345 | | MucB/RseB C-terminal domain-containing protein | 0.46 | ABCV34_RS03095 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.11 | GFF3341 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.41 | GFF1034 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Variovorax sp. SCN45 | 0.11 | GFF3865 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.42 | GFF2375 | | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II | — | — |
| Ralstonia sp. UNC404CL21Col | 0.10 | ABZR87_RS10175 | | MucB/RseB C-terminal domain-containing protein | 0.47 | ABZR87_RS15225 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 80 |
| Variovorax sp. OAS795 | 0.10 | ABID97_RS08340 | | MucB/RseB C-terminal domain-containing protein | 0.41 | ABID97_RS23670 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Ralstonia solanacearum PSI07 | 0.10 | RPSI07_RS19005 | | sugar dehydratase | 0.46 | RPSI07_RS13870 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.47 | 70 |
| Acidovorax sp. GW101-3H11 | 0.10 | Ac3H11_1571 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.42 | Ac3H11_3664 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Ralstonia solanacearum GMI1000 | 0.10 | RS_RS05235 | | sugar dehydratase | 0.46 | RS_RS10800 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.09 | RALBFv3_RS14455 | | sugar dehydratase | 0.46 | RALBFv3_RS03315 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.09 | UW163_RS11920 | | sugar dehydratase | 0.46 | UW163_RS10410 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.09 | RR42_RS14070 | | sugar dehydratase | 0.47 | RR42_RS04920 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
Not shown: 0 genomes with orthologs for Shew_1050 only; 50 genomes with orthologs for Shew_3499 only