| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Shewanella loihica PV-4 | 1.0 | Shew_0735 | | SufS subfamily cysteine desulfurase (RefSeq) | 1.0 | Shew_1384 | | response regulator receiver protein (RefSeq) | 0.39 | 2 |
| Shewanella oneidensis MR-1 | 0.77 | SO3789 | | aminotransferase, class V (NCBI ptt file) | 0.98 | SO3209 | cheY-3 | chemotaxis protein CheY (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.73 | Shewana3_0808 | | cysteine desulfurase (RefSeq) | 0.98 | Shewana3_1360 | | response regulator receiver protein (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.68 | Sama_2777 | | aminotransferase, class V (RefSeq) | 0.99 | Sama_2279 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Marinobacter adhaerens HP15 | 0.54 | HP15_2987 | | cysteine desulfurase, SufS subfamily | 0.86 | HP15_2301 | | response regulator receiver domain protein (CheY-) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.50 | AO353_24935 | | cysteine sulfinate desulfinase | 0.84 | AO353_18790 | | histidine kinase | low | > 101 |
| Vibrio cholerae E7946 ATCC 55056 | 0.49 | CSW01_11740 | | cysteine desulfurase CsdA | 0.90 | CSW01_10330 | | chemotaxis protein CheY | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.49 | MIT1002_02797 | | putative cysteine desulfurase | 0.92 | MIT1002_01104 | | Chemotaxis protein CheY | — | — |
| Pantoea sp. MT58 | 0.48 | IAI47_10860 | | cysteine desulfurase SufS | 0.72 | IAI47_08335 | | chemotaxis response regulator CheY | — | — |
| Pectobacterium carotovorum WPP14 | 0.48 | HER17_RS08940 | | cysteine desulfurase SufS | 0.74 | HER17_RS08125 | | chemotaxis response regulator CheY | low | > 75 |
| Serratia liquefaciens MT49 | 0.47 | IAI46_11165 | | cysteine desulfurase SufS | 0.74 | IAI46_16010 | | chemotaxis response regulator CheY | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.47 | LU632_RS11075 | sufS | cysteine desulfurase SufS | 0.73 | LU632_RS13520 | cheY | chemotaxis response regulator CheY | — | — |
| Dickeya dianthicola 67-19 | 0.47 | HGI48_RS12825 | | cysteine desulfurase SufS | 0.74 | HGI48_RS13565 | | chemotaxis response regulator CheY | low | > 71 |
| Escherichia fergusonii Becca | 0.47 | EFB2_02312 | | Cysteine desulfurase | 0.72 | EFB2_02061 | | Chemotaxis protein CheY | low | > 86 |
| Escherichia coli Nissle 1917 | 0.47 | ECOLIN_RS09395 | | cysteine desulfurase SufS | 0.72 | ECOLIN_RS10750 | | chemotaxis response regulator CheY | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.47 | CA264_08285 | | aminotransferase | 0.28 | CA264_07605 | | response regulator | low | > 74 |
| Escherichia coli ECRC62 | 0.46 | BNILDI_16580 | sufS | cysteine desulfurase SufS | 0.73 | BNILDI_15385 | cheY | chemotaxis regulatory protein CheY | low | > 75 |
| Escherichia coli BW25113 | 0.46 | b1680 | sufS | selenocysteine lyase (NCBI) | 0.73 | b1882 | cheY | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.46 | GFF3562 | | Cysteine desulfurase (EC 2.8.1.7), SufS subfamily | 0.73 | GFF1663 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | low | > 78 |
| Dickeya dianthicola ME23 | 0.46 | DZA65_RS13290 | | cysteine desulfurase SufS | 0.74 | DZA65_RS14050 | | chemotaxis protein CheY | low | > 75 |
| Escherichia coli ECOR38 | 0.46 | HEPCGN_05655 | sufS | cysteine desulfurase SufS | 0.72 | HEPCGN_04575 | cheY | chemotaxis regulatory protein CheY | low | > 87 |
| Escherichia coli BL21 | 0.46 | ECD_01649 | | cysteine desulfurase, stimulated by SufE; selenocysteine lyase, PLP-dependent | 0.73 | ECD_01853 | | chemotaxis regulator transmitting signal to flagellar motor component | — | — |
| Escherichia coli ECOR27 | 0.46 | NOLOHH_17790 | sufS | cysteine desulfurase SufS | 0.73 | NOLOHH_16595 | cheY | chemotaxis regulatory protein CheY | low | > 75 |
| Rahnella sp. WP5 | 0.46 | EX31_RS13890 | | cysteine desulfurase SufS | 0.73 | EX31_RS11355 | | chemotaxis protein CheY | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.46 | OHPLBJKB_02044 | | Cysteine desulfurase | 0.73 | OHPLBJKB_01846 | | Chemotaxis protein CheY | low | > 73 |
| Dickeya dadantii 3937 | 0.46 | DDA3937_RS12760 | | cysteine desulfurase SufS | 0.74 | DDA3937_RS13520 | | chemotaxis response regulator CheY | low | > 74 |
| Escherichia coli ECRC99 | 0.46 | KEDOAH_00840 | sufS | cysteine desulfurase SufS | 0.73 | KEDOAH_01950 | cheY | chemotaxis regulatory protein CheY | — | — |
| Escherichia coli ECRC98 | 0.46 | JDDGAC_01845 | sufS | cysteine desulfurase SufS | 0.73 | JDDGAC_00730 | cheY | chemotaxis regulatory protein CheY | — | — |
| Lysobacter sp. OAE881 | 0.46 | ABIE51_RS15745 | | cysteine desulfurase | 0.80 | ABIE51_RS16870 | | chemotaxis response regulator CheY | — | — |
| Escherichia coli ECRC101 | 0.46 | MCAODC_18140 | sufS | cysteine desulfurase SufS | 0.73 | MCAODC_19250 | cheY | chemotaxis regulatory protein CheY | — | — |
| Escherichia coli ECRC100 | 0.46 | OKFHMN_27270 | sufS | cysteine desulfurase SufS | 0.73 | OKFHMN_26155 | cheY | chemotaxis regulatory protein CheY | — | — |
| Escherichia coli ECRC102 | 0.46 | NIAGMN_00795 | sufS | cysteine desulfurase SufS | 0.73 | NIAGMN_01905 | cheY | chemotaxis regulatory protein CheY | — | — |
| Enterobacter asburiae PDN3 | 0.46 | EX28DRAFT_1683 | | cysteine desulfurases, SufSfamily | 0.73 | EX28DRAFT_0674 | | Response regulator receiver domain | low | > 76 |
| Azospirillum sp. SherDot2 | 0.45 | MPMX19_04833 | | Cysteine desulfurase | 0.54 | MPMX19_01605 | | Chemotaxis protein CheY | — | — |
| Enterobacter sp. TBS_079 | 0.45 | MPMX20_01947 | | Cysteine desulfurase | 0.73 | MPMX20_02786 | | Chemotaxis protein CheY | low | > 85 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.45 | Xcc-8004.1697.1 | | Cysteine desulfurase (EC 2.8.1.7), SufS subfamily | 0.79 | Xcc-8004.2833.1 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | — | — |
| Castellaniella sp019104865 MT123 | 0.45 | ABCV34_RS04680 | | cysteine desulfurase | 0.70 | ABCV34_RS05810 | | chemotaxis response regulator CheY | — | — |
| Rhodospirillum rubrum S1H | 0.45 | Rru_A2570 | | Cysteine desulphurases, SufS (NCBI) | 0.57 | Rru_A2837 | | Response regulator receiver domain protein (CheY) (NCBI) | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.44 | CCNA_01936 | | cysteine desulfurase/selenocysteine lyase | 0.52 | CCNA_00628 | | chemotaxis protein cheY | — | — |
| Caulobacter crescentus NA1000 | 0.44 | CCNA_01936 | | cysteine desulfurase/selenocysteine lyase | 0.52 | CCNA_00628 | | chemotaxis protein cheY | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS09460 | | cysteine desulfurase | 0.76 | ABZR86_RS20270 | | chemotaxis response regulator CheY | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.44 | Ga0059261_1475 | | cysteine desulfurases, SufSfamily | 0.38 | Ga0059261_1116 | | Response regulator receiver domain | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS03080 | | cysteine desulfurase | 0.76 | LRK54_RS13585 | | chemotaxis response regulator CheY | — | — |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_09950 | sufS,csdA | cysteine desulfurase CsdA | 0.71 | OKGIIK_02835 | cheY | chemotaxis response regulator CheY | — | — |
| Rhodanobacter denitrificans MT42 | 0.44 | LRK55_RS02830 | | cysteine desulfurase | 0.76 | LRK55_RS13325 | | chemotaxis response regulator CheY | — | — |
| Azospirillum brasilense Sp245 | 0.44 | AZOBR_RS14845 | | cysteine desulfurase | 0.54 | AZOBR_RS12415 | | chemotaxis protein CheY | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.43 | A4249_RS04590 | | cysteine desulfurase | 0.38 | A4249_RS15585 | | response regulator | — | — |
| Agrobacterium fabrum C58 | 0.43 | Atu1821 | | cysteine desulfurase | 0.33 | Atu0520 | | chemotaxis receiver protein | — | — |
| Pseudomonas putida KT2440 | 0.42 | PP_1529 | | Probable cysteine desulfurase | 0.80 | PP_4340 | | response regulator for chemotactic signal transduction | low | > 96 |
| Bosea sp. OAE506 | 0.42 | ABIE41_RS16975 | | cysteine desulfurase | 0.51 | ABIE41_RS23275 | | response regulator | — | — |
| Pseudomonas stutzeri RCH2 | 0.42 | Psest_1464 | | Selenocysteine lyase | 0.83 | Psest_1741 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | low | > 67 |
| Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS06240 | | cysteine desulfurase | 0.82 | PFLU_RS21655 | | response regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS06240 | | cysteine desulfurase | 0.82 | PFLU_RS21655 | | response regulator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.41 | PS417_06175 | | cysteine sulfinate desulfinase | 0.81 | PS417_19690 | | histidine kinase | 0.23 | 62 |
| Pseudomonas fluorescens GW456-L13 | 0.41 | PfGW456L13_4717 | | Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA | 0.84 | PfGW456L13_4330 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_3079 | | Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA | 0.87 | Pf6N2E2_2572 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_06075 | | cysteine sulfinate desulfinase | 0.87 | AO356_03725 | | histidine kinase | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.41 | Pf1N1B4_3076 | | Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA | 0.83 | Pf1N1B4_3627 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | low | > 87 |
| Sinorhizobium meliloti 1021 | 0.41 | SMc00533 | | pyridoxal-phosphate-dependent aminotransferase | 0.32 | SMc03011 | | chemotaxis regulator protein | — | — |
| Rhizobium sp. OAE497 | 0.41 | ABIE40_RS09990 | | cysteine desulfurase | 0.33 | ABIE40_RS02895 | | response regulator | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.40 | Psyr_1335 | | Aminotransferase, class V | 0.84 | Psyr_3436 | | Response regulator receiver | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.40 | Psyr_1335 | | Aminotransferase, class V | 0.84 | Psyr_3436 | | Response regulator receiver | low | > 86 |
| Phaeobacter inhibens DSM 17395 | 0.39 | PGA1_c15430 | | cysteine desulfurase SufS | 0.33 | PGA1_262p02090 | | response regulator receiver domain-containing protein | — | — |
| Pseudomonas sp. RS175 | 0.39 | PFR28_00389 | | Cysteine desulfurase SufS | 0.82 | PFR28_00853 | | Chemotaxis protein CheY | low | > 88 |
| Cupriavidus basilensis FW507-4G11 | 0.19 | RR42_RS21580 | | cysteine desulfurase | 0.72 | RR42_RS35780 | | chemotaxis protein CheY | low | > 128 |
Not shown: 11 genomes with orthologs for Shew_0735 only; 19 genomes with orthologs for Shew_1384 only