| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b2038 | rfbC | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | 1.0 | b3778 | rep | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | 0.25 | 17 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.63 | GFF3890 | | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) | 0.96 | GFF2894 | | ATP-dependent DNA helicase Rep | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.59 | OHPLBJKB_01663 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 1.00 | OHPLBJKB_04276 | | ATP-dependent DNA helicase Rep | low | > 73 |
| Ralstonia solanacearum PSI07 | 0.57 | RPSI07_RS20600 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.41 | RPSI07_RS08600 | | ATP-dependent DNA helicase Rep | — | — |
| Ralstonia solanacearum GMI1000 | 0.57 | RS_RS03445 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.41 | RS_RS16480 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas simiae WCS417 | 0.57 | PS417_01320 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.52 | PS417_27670 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas sp. RS175 | 0.56 | PFR28_04892 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.51 | PFR28_04392 | | ATP-dependent DNA helicase Rep | — | — |
| Ralstonia solanacearum UW163 | 0.56 | UW163_RS00905 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.41 | UW163_RS04975 | | ATP-dependent DNA helicase Rep | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.56 | RALBFv3_RS12660 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.41 | RALBFv3_RS08635 | | ATP-dependent DNA helicase Rep | — | — |
| Escherichia coli ECOR38 | 0.56 | HEPCGN_03120 | rfbC | dTDP-4-dehydrorhamnose 3,5-epimerase | 1.00 | HEPCGN_13320 | rep | DNA helicase Rep | — | — |
| Escherichia coli BL21 | 0.56 | ECD_01944 | | dTDP-4-dehydrorhamnose 3,5-epimerase (RmlC) | 1.00 | ECD_03656 | | DNA helicase and single-stranded DNA-dependent ATPase | — | — |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_1883 | | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) | 0.35 | Ac3H11_866 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.55 | Pf1N1B4_1664 | | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) | 0.52 | Pf1N1B4_2151 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_11875 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.52 | AO353_09120 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_399 | | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) | 0.52 | PfGW456L13_819 | | ATP-dependent DNA helicase Rep | — | — |
| Rahnella sp. WP5 | 0.55 | EX31_RS11510 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.85 | EX31_RS15030 | | DNA helicase Rep | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_10050 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.52 | AO356_12655 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas putida KT2440 | 0.54 | PP_1782 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.52 | PP_5264 | | helicase a single-stranded DNA dependent ATPase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.54 | Psyr_4936 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.53 | Psyr_0075 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas stutzeri RCH2 | 0.54 | Psest_4264 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.52 | Psest_3778 | | ATP-dependent DNA helicase Rep | — | — |
| Variovorax sp. SCN45 | 0.54 | GFF6879 | | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) | 0.38 | GFF5842 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.54 | Psyr_4936 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.53 | Psyr_0075 | | ATP-dependent DNA helicase Rep | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.54 | GFF1840 | | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) | 0.35 | GFF1778 | | ATP-dependent DNA helicase Rep | — | — |
| Klebsiella michiganensis M5al | 0.54 | BWI76_RS19055 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.93 | BWI76_RS01020 | | DNA helicase Rep | — | — |
| Escherichia fergusonii Becca | 0.54 | EFB2_01816 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.97 | EFB2_04860 | | ATP-dependent DNA helicase Rep | — | — |
| Variovorax sp. OAS795 | 0.54 | ABID97_RS05675 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.36 | ABID97_RS05510 | | UvrD-helicase domain-containing protein | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_3880 | | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) | 0.52 | Pf6N2E2_4398 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas fluorescens SBW25 | 0.54 | PFLU_RS01415 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.52 | PFLU_RS29345 | | DNA helicase Rep | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.54 | PFLU_RS01415 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.52 | PFLU_RS29345 | | DNA helicase Rep | — | — |
| Pseudomonas sp. S08-1 | 0.53 | OH686_14370 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.51 | OH686_13715 | | ATP-dependent DNA helicase Rep | — | — |
| Shewanella loihica PV-4 | 0.53 | Shew_1404 | | dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) | 0.66 | Shew_0305 | | ATP-dependent DNA helicase Rep (RefSeq) | — | — |
| Acinetobacter radioresistens SK82 | 0.53 | MPMX26_00453 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.49 | MPMX26_02416 | | ATP-dependent DNA helicase Rep | — | — |
| Dechlorosoma suillum PS | 0.52 | Dsui_1951 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.45 | Dsui_0933 | | DNA/RNA helicase, superfamily I | — | — |
| Erwinia tracheiphila SCR3 | 0.52 | LU632_RS08865 | rfbC | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.86 | LU632_RS24280 | rep | DNA helicase Rep | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.52 | QEN71_RS25745 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.42 | QEN71_RS29185 | | UvrD-helicase domain-containing protein | — | — |
| Shewanella sp. ANA-3 | 0.51 | Shewana3_1382 | | dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) | 0.66 | Shewana3_0374 | | ATP-dependent DNA helicase Rep (RefSeq) | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.51 | H281DRAFT_04824 | | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) | 0.42 | H281DRAFT_02416 | | ATP-dependent DNA helicase Rep | — | — |
| Alteromonas macleodii MIT1002 | 0.51 | MIT1002_03559 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.65 | MIT1002_00071 | | ATP-dependent DNA helicase rep | — | — |
| Burkholderia phytofirmans PsJN | 0.51 | BPHYT_RS04275 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.42 | BPHYT_RS19305 | | ATP-dependent DNA helicase Rep | — | — |
| Paraburkholderia graminis OAS925 | 0.51 | ABIE53_001139 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.42 | ABIE53_000233 | | ATP-dependent DNA helicase Rep | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS15830 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.42 | RR42_RS20055 | | ATP-dependent DNA helicase Rep | — | — |
| Dickeya dadantii 3937 | 0.51 | DDA3937_RS06745 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.87 | DDA3937_RS20105 | | DNA helicase Rep | — | — |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_0520 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.93 | EX28DRAFT_4449 | | ATP-dependent DNA helicase Rep (EC 3.6.1.-) | — | — |
| Dickeya dianthicola ME23 | 0.50 | DZA65_RS07120 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.85 | DZA65_RS21290 | | DNA helicase Rep | — | — |
| Dickeya dianthicola 67-19 | 0.50 | HGI48_RS06765 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.85 | HGI48_RS20245 | | DNA helicase Rep | — | — |
| Ralstonia sp. UNC404CL21Col | 0.50 | ABZR87_RS08660 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.41 | ABZR87_RS03915 | | UvrD-helicase domain-containing protein | low | > 80 |
| Marinobacter adhaerens HP15 | 0.47 | HP15_p187g51 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.50 | HP15_214 | | DNA helicase, ATP-dependent, RepA type | — | — |
| Shewanella oneidensis MR-1 | 0.47 | SO3160 | rfbC | dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) | 0.65 | SO4325 | rep | ATP-dependent DNA helicase Rep (NCBI ptt file) | — | — |
| Shewanella amazonensis SB2B | 0.46 | Sama_2237 | | dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) | 0.66 | Sama_3266 | | ATP-dependent DNA helicase Rep (RefSeq) | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.46 | ABZR86_RS18725 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.41 | ABZR86_RS16790 | | UvrD-helicase domain-containing protein | — | — |
| Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_01165 | rfbC | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.41 | OKGIIK_13085 | rep | ATP-dependent DNA helicase Rep | — | — |
| Rhodanobacter denitrificans MT42 | 0.45 | LRK55_RS05430 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.41 | LRK55_RS10435 | | UvrD-helicase domain-containing protein | — | — |
| Castellaniella sp019104865 MT123 | 0.45 | ABCV34_RS02485 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.38 | ABCV34_RS11065 | | UvrD-helicase domain-containing protein | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS05675 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.41 | LRK54_RS10795 | | UvrD-helicase domain-containing protein | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.4484.1 | | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) | 0.39 | Xcc-8004.5266.1 | | ATP-dependent DNA helicase Rep | — | — |
| Herbaspirillum seropedicae SmR1 | 0.44 | HSERO_RS22055 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.42 | HSERO_RS21590 | | ATP-dependent DNA helicase Rep | — | — |
| Lysobacter sp. OAE881 | 0.44 | ABIE51_RS15610 | | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.36 | ABIE51_RS00370 | | UvrD-helicase domain-containing protein | — | — |
Not shown: 28 genomes with orthologs for b2038 only; 14 genomes with orthologs for b3778 only