| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b2954 | yggV | putative deoxyribonucleotide triphosphate pyrophosphatase (NCBI) | 1.0 | b3929 | rraA | ribonuclease activity regulator protein RraA (NCBI) | 0.37 | 13 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS16430 | | XTP/dITP diphosphatase | 1.00 | ECOLIN_RS22625 | | ribonuclease E activity regulator RraA | low | > 52 |
| Escherichia fergusonii Becca | 0.99 | EFB2_00948 | | dITP/XTP pyrophosphatase | 1.00 | EFB2_04689 | | Regulator of ribonuclease activity A | low | > 86 |
| Escherichia coli ECRC101 | 0.98 | OKFHMN_19240 | rdgB | XTP/dITP diphosphatase | 1.00 | OKFHMN_13750 | rraA | ribonuclease E activity regulator RraA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.98 | OHPLBJKB_00762 | | dITP/XTP pyrophosphatase | 1.00 | OHPLBJKB_04122 | | Regulator of ribonuclease activity A | low | > 73 |
| Escherichia coli ECRC62 | 0.98 | BNILDI_09690 | rdgB | XTP/dITP diphosphatase | 1.00 | BNILDI_05635 | rraA | ribonuclease E activity regulator RraA | — | — |
| Escherichia coli ECRC98 | 0.98 | JDDGAC_22870 | rdgB | XTP/dITP diphosphatase | 1.00 | JDDGAC_17375 | rraA | ribonuclease E activity regulator RraA | — | — |
| Escherichia coli ECRC99 | 0.98 | KEDOAH_08900 | rdgB | XTP/dITP diphosphatase | 1.00 | KEDOAH_14410 | rraA | ribonuclease E activity regulator RraA | — | — |
| Escherichia coli ECOR27 | 0.98 | NOLOHH_11110 | rdgB | XTP/dITP diphosphatase | 1.00 | NOLOHH_05895 | rraA | ribonuclease E activity regulator RraA | low | > 57 |
| Escherichia coli ECRC102 | 0.98 | NIAGMN_17005 | rdgB | XTP/dITP diphosphatase | 1.00 | NIAGMN_11505 | rraA | ribonuclease E activity regulator RraA | — | — |
| Escherichia coli BL21 | 0.98 | ECD_02784 | | dITP/XTP pyrophosphatase | 1.00 | ECD_03814 | | ribonuclease E (RNase E) inhibitor protein | — | — |
| Escherichia coli ECRC101 | 0.98 | MCAODC_09760 | rdgB | XTP/dITP diphosphatase | 1.00 | MCAODC_04250 | rraA | ribonuclease E activity regulator RraA | — | — |
| Escherichia coli ECOR38 | 0.98 | HEPCGN_18545 | rdgB | XTP/dITP diphosphatase | 1.00 | HEPCGN_12395 | rraA | ribonuclease E activity regulator RraA | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.94 | GFF3057 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.98 | GFF2311 | | Ribonuclease E inhibitor RraA | low | > 78 |
| Enterobacter sp. TBS_079 | 0.91 | MPMX20_03812 | | dITP/XTP pyrophosphatase | 0.97 | MPMX20_04540 | | Regulator of ribonuclease activity A | low | > 85 |
| Klebsiella michiganensis M5al | 0.90 | BWI76_RS24115 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.96 | BWI76_RS00740 | | ribonuclease E activity regulator RraA | low | > 92 |
| Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_2992 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.96 | EX28DRAFT_4402 | | regulator of ribonuclease activity A | low | > 76 |
| Dickeya dianthicola 67-19 | 0.84 | HGI48_RS17365 | | XTP/dITP diphosphatase | 0.86 | HGI48_RS20470 | | ribonuclease E activity regulator RraA | low | > 71 |
| Dickeya dianthicola ME23 | 0.83 | DZA65_RS18455 | | XTP/dITP diphosphatase | 0.86 | DZA65_RS21515 | | ribonuclease E activity regulator RraA | low | > 75 |
| Dickeya dadantii 3937 | 0.83 | DDA3937_RS17320 | | XTP/dITP diphosphatase | 0.86 | DDA3937_RS00905 | | ribonuclease E activity regulator RraA | low | > 74 |
| Pantoea sp. MT58 | 0.82 | IAI47_03585 | | XTP/dITP diphosphatase | 0.81 | IAI47_00840 | | ribonuclease E activity regulator RraA | low | > 76 |
| Rahnella sp. WP5 | 0.82 | EX31_RS02705 | | XTP/dITP diphosphatase | 0.93 | EX31_RS14255 | | ribonuclease E activity regulator RraA | low | > 89 |
| Serratia liquefaciens MT49 | 0.79 | IAI46_21430 | | XTP/dITP diphosphatase | 0.94 | IAI46_24585 | | ribonuclease E activity regulator RraA | 0.51 | 30 |
| Pectobacterium carotovorum WPP14 | 0.78 | HER17_RS03790 | | XTP/dITP diphosphatase | 0.92 | HER17_RS00840 | | ribonuclease E activity regulator RraA | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.77 | LU632_RS05450 | | XTP/dITP diphosphatase | 0.95 | LU632_RS19685 | rraA | ribonuclease E activity regulator RraA | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.68 | CSW01_02430 | | non-canonical purine NTP pyrophosphatase | 0.73 | CSW01_13500 | | ribonuclease E activity regulator RraA | low | > 62 |
| Marinobacter adhaerens HP15 | 0.66 | HP15_281 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.49 | HP15_2228 | | ribonuclease activity regulator protein RraA | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.63 | MIT1002_00940 | | dITP/XTP pyrophosphatase | 0.67 | MIT1002_00164 | | Regulator of ribonuclease activity A | low | > 70 |
| Shewanella loihica PV-4 | 0.58 | Shew_1132 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (RefSeq) | 0.72 | Shew_3370 | | ribonuclease activity regulator protein RraA (RefSeq) | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.58 | Xcc-8004.1223.1 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.46 | Xcc-8004.1848.1 | | Ribonuclease E inhibitor RraA | low | > 74 |
| Shewanella amazonensis SB2B | 0.56 | Sama_2482 | | Ham1-like protein (RefSeq) | 0.71 | Sama_3200 | | ribonuclease activity regulator protein RraA (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.56 | Shewana3_1189 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (RefSeq) | 0.73 | Shewana3_3723 | | ribonuclease activity regulator protein RraA (RefSeq) | low | > 73 |
| Lysobacter sp. OAE881 | 0.55 | ABIE51_RS17295 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.40 | ABIE51_RS04140 | | ribonuclease E activity regulator RraA | — | — |
| Shewanella oneidensis MR-1 | 0.55 | SO3358 | | HAM1 protein (NCBI ptt file) | 0.74 | SO4197 | menG-2 | S-adenosylmethionine:2-demethylmenaquinone methyltransferase (NCBI ptt file) | low | > 76 |
| Herbaspirillum seropedicae SmR1 | 0.54 | HSERO_RS10660 | | nucleoside-triphosphate diphosphatase | 0.41 | HSERO_RS10555 | | ribonuclease | low | > 78 |
| Ralstonia solanacearum UW163 | 0.52 | UW163_RS10370 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.41 | UW163_RS13460 | | ribonuclease | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.52 | RALBFv3_RS03350 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.41 | RALBFv3_RS00130 | | ribonuclease | low | > 76 |
| Dechlorosoma suillum PS | 0.52 | Dsui_0492 | | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family | 0.45 | Dsui_0010 | | RraA family protein | low | > 51 |
| Ralstonia sp. UNC404CL21Col | 0.51 | ABZR87_RS15260 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.41 | ABZR87_RS11580 | | ribonuclease E activity regulator RraA | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.51 | RPSI07_RS13835 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.41 | RPSI07_RS17355 | | ribonuclease E inhibitor RraA | — | — |
| Ralstonia solanacearum GMI1000 | 0.51 | RS_RS10835 | | non-canonical purine NTP pyrophosphatase | 0.38 | RS_RS06790 | | ribonuclease E inhibitor RraA | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.50 | Psyr_0472 | | Ham1-like protein | 0.56 | Psyr_2092 | | Protein of unknown function 1935 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.50 | Psyr_0472 | | Ham1-like protein | 0.56 | Psyr_2092 | | Protein of unknown function 1935 | low | > 86 |
| Acinetobacter radioresistens SK82 | 0.50 | MPMX26_00400 | | dITP/XTP pyrophosphatase | 0.48 | MPMX26_01316 | | Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | low | > 36 |
| Cupriavidus basilensis FW507-4G11 | 0.49 | RR42_RS04885 | | nucleoside-triphosphate diphosphatase | 0.38 | RR42_RS12215 | | ribonuclease | low | > 128 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_11015 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.58 | OH686_01650 | | Ribonuclease E inhibitor RraA | low | > 80 |
| Pseudomonas simiae WCS417 | 0.49 | PS417_26755 | | nucleoside-triphosphate diphosphatase | 0.57 | PS417_21010 | | ribonuclease activity regulator protein RraA | low | > 88 |
| Pseudomonas putida KT2440 | 0.49 | PP_5100 | | dITP/XTP pyrophosphatase | 0.58 | PP_2084 | | Putative regulator of ribonuclease activity | low | > 96 |
| Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS03640 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.43 | QEN71_RS06240 | | ribonuclease E activity regulator RraA | low | > 153 |
| Pseudomonas fluorescens SBW25 | 0.49 | PFLU_RS28400 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.57 | PFLU_RS22620 | | putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.49 | PFLU_RS28400 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.57 | PFLU_RS22620 | | putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.49 | AO353_08195 | | non-canonical purine NTP pyrophosphatase | 0.58 | AO353_00850 | | ribonuclease activity regulator protein RraA | low | > 101 |
| Pseudomonas sp. RS175 | 0.49 | PFR28_04248 | | dITP/XTP pyrophosphatase | 0.57 | PFR28_01040 | | Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.48 | PfGW456L13_1004 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.56 | PfGW456L13_4110 | | Ribonuclease E inhibitor RraA | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_13395 | | non-canonical purine NTP pyrophosphatase | 0.57 | AO356_02815 | | ribonuclease activity regulator protein RraA | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_4594 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.57 | Pf6N2E2_2387 | | Ribonuclease E inhibitor RraA | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_2335 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.57 | Pf1N1B4_3828 | | Ribonuclease E inhibitor RraA | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_0277 | | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family | 0.59 | Psest_2315 | | RraA famliy | low | > 67 |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS15330 | | nucleoside-triphosphate diphosphatase | 0.39 | BPHYT_RS12315 | | ribonuclease | — | — |
| Variovorax sp. SCN45 | 0.42 | GFF2382 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.66) | 0.38 | GFF4367 | | KEGG: regulator of ribonuclease activity A | — | — |
| Acidovorax sp. GW101-3H11 | 0.42 | Ac3H11_3671 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.42 | Ac3H11_2834 | | Ribonuclease E inhibitor RraA | low | > 79 |
| Mycobacterium tuberculosis H37Rv | 0.34 | Rv1341 | | Conserved protein | 0.40 | Rv3853 | | Regulator of RNase E activity a RraA | — | — |
| Azospirillum brasilense Sp245 | 0.25 | AZOBR_RS02200 | | nucleoside-triphosphate diphosphatase | 0.42 | AZOBR_RS17130 | | ribonuclease | — | — |
| Azospirillum sp. SherDot2 | 0.24 | MPMX19_02575 | | dITP/XTP pyrophosphatase | 0.39 | MPMX19_04842 | | Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | low | > 112 |
Not shown: 39 genomes with orthologs for b2954 only; 0 genomes with orthologs for b3929 only