Conservation of cofitness between b2346 and b3194 in Escherichia coli BW25113

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2346 vacJ predicted lipoprotein (NCBI) 1.0 b3194 yrbE predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) 0.91 5
Escherichia coli ECRC99 1.00 KEDOAH_05660 mlaA phospholipid-binding lipoprotein MlaA 1.00 KEDOAH_10170 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli ECRC102 1.00 NIAGMN_20310 mlaA phospholipid-binding lipoprotein MlaA 1.00 NIAGMN_15740 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli ECOR27 1.00 NOLOHH_14170 mlaA phospholipid-binding lipoprotein MlaA 1.00 NOLOHH_09780 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.86 4
Escherichia coli ECRC101 1.00 OKFHMN_22535 mlaA phospholipid-binding lipoprotein MlaA 1.00 OKFHMN_17980 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli ECRC98 1.00 JDDGAC_26495 mlaA phospholipid-binding lipoprotein MlaA 1.00 JDDGAC_21605 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli ECRC101 1.00 MCAODC_13565 mlaA phospholipid-binding lipoprotein MlaA 1.00 MCAODC_08500 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01360 putative phospholipid-binding lipoprotein MlaA 1.00 OHPLBJKB_00506 putative phospholipid ABC transporter permease protein MlaE 0.86 1
Escherichia coli ECRC62 1.00 BNILDI_13080 mlaA phospholipid-binding lipoprotein MlaA 1.00 BNILDI_01755 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli BL21 1.00 ECD_02272 ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component 1.00 ECD_03059 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein 0.63 19
Escherichia fergusonii Becca 0.99 EFB2_01514 Intermembrane phospholipid transport system lipoprotein MlaA 1.00 EFB2_00629 Intermembrane phospholipid transport system permease protein MlaE low > 86
Escherichia coli ECOR38 0.99 HEPCGN_21730 mlaA phospholipid-binding lipoprotein MlaA 1.00 HEPCGN_16855 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.95 3
Escherichia coli Nissle 1917 0.99 ECOLIN_RS13570 phospholipid-binding lipoprotein MlaA 1.00 ECOLIN_RS18385 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.89 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF1958 Lipoprotein 0.98 GFF2938 Uncharacterized ABC transporter, permease component YrbE 0.56 3
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0267 Surface lipoprotein 0.96 EX28DRAFT_3248 ABC transport permease subunit 0.74 1
Enterobacter sp. TBS_079 0.91 MPMX20_03272 Intermembrane phospholipid transport system lipoprotein MlaA 0.97 MPMX20_04100 Intermembrane phospholipid transport system permease protein MlaE 0.32 25
Klebsiella michiganensis M5al 0.89 BWI76_RS20475 phospholipid-binding lipoprotein MlaA 0.97 BWI76_RS25225 ABC transporter permease 0.82 3
Serratia liquefaciens MT49 0.79 IAI46_18065 phospholipid-binding lipoprotein MlaA 0.86 IAI46_22425 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 86
Pantoea sp. MT58 0.77 IAI47_06110 phospholipid-binding lipoprotein MlaA 0.87 IAI47_17140 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.62 5
Rahnella sp. WP5 0.76 EX31_RS19725 phospholipid-binding lipoprotein MlaA 0.87 EX31_RS12440 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.58 9
Pectobacterium carotovorum WPP14 0.73 HER17_RS06855 phospholipid-binding lipoprotein MlaA 0.88 HER17_RS20020 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.67 11
Dickeya dianthicola ME23 0.71 DZA65_RS15515 phospholipid-binding lipoprotein MlaA 0.86 DZA65_RS01550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.88 3
Dickeya dadantii 3937 0.71 DDA3937_RS14625 phospholipid-binding lipoprotein MlaA 0.87 DDA3937_RS01570 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.68 7
Erwinia tracheiphila SCR3 0.70 LU632_RS07300 mlaA phospholipid-binding lipoprotein MlaA 0.87 LU632_RS21240 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.92 7
Dickeya dianthicola 67-19 0.68 HGI48_RS14575 phospholipid-binding lipoprotein MlaA 0.86 HGI48_RS01485 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 71
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_10245 ABC transporter 0.76 CSW01_12770 ABC transporter permease 0.54 4
Shewanella amazonensis SB2B 0.32 Sama_2268 vacJ lipoprotein, putative (RefSeq) 0.69 Sama_3080 hypothetical protein (RefSeq) 0.93 3
Shewanella loihica PV-4 0.31 Shew_1395 VacJ family lipoprotein (RefSeq) 0.69 Shew_3303 hypothetical protein (RefSeq) 0.88 1
Shewanella oneidensis MR-1 0.31 SO3197 vacJ lipoprotein, putative (NCBI ptt file) 0.70 SO3953 conserved hypothetical protein TIGR00056 (NCBI ptt file) 0.93 3
Shewanella sp. ANA-3 0.30 Shewana3_1371 VacJ family lipoprotein (RefSeq) 0.69 Shewana3_0679 hypothetical protein (RefSeq) 0.92 2
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS20385 ABC transporter 0.47 HSERO_RS20395 ABC transporter permease
Dechlorosoma suillum PS 0.25 Dsui_1401 surface lipoprotein 0.54 Dsui_1399 conserved hypothetical integral membrane protein 0.95 2
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS02540 VacJ family lipoprotein 0.53 ABZR87_RS02550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.94 4
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF1322 Nucleoside ABC transporter, periplasmic nucleoside-binding protein 0.47 GFF1324 Uncharacterized ABC transporter, permease component YrbE 0.89 3
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS06885 ABC transporter 0.53 RALBFv3_RS06895 ABC transporter permease
Marinobacter adhaerens HP15 0.23 HP15_1860 VacJ family lipoprotein 0.64 HP15_2435 ABC-type transport system involved in resistance to organic solvents, permease component 0.87 1
Ralstonia solanacearum UW163 0.23 UW163_RS06730 ABC transporter 0.53 UW163_RS06720 ABC transporter permease
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_00330 hypothetical protein 0.61 AO353_05145 ABC transporter permease 0.93 3
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_4012 VacJ-like lipoprotein precursor 0.61 PfGW456L13_5007 Uncharacterized ABC transporter, permease component YrbE
Pseudomonas sp. S08-1 0.23 OH686_22720 Outer-membrane-phospholipid-binding lipoprotein MlaA 0.64 OH686_08505 Phospholipid ABC transporter permease protein MlaE 0.78 16
Pseudomonas simiae WCS417 0.23 PS417_07710 membrane protein 0.60 PS417_04380 ABC transporter permease 0.57 4
Ralstonia solanacearum PSI07 0.23 RPSI07_RS10350 ABC transporter 0.52 RPSI07_RS10340 ABC transporter permease 0.87 1
Pseudomonas stutzeri RCH2 0.22 Psest_2712 Surface lipoprotein 0.65 Psest_3306 conserved hypothetical integral membrane protein 0.90 5
Acidovorax sp. GW101-3H11 0.22 Ac3H11_4715 VacJ family lipoprotein 0.52 Ac3H11_4713 Uncharacterized ABC transporter, permease component YrbE 0.96 3
Pseudomonas fluorescens SBW25 0.22 PFLU_RS07785 VacJ family lipoprotein 0.60 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.96 3
Pseudomonas fluorescens SBW25-INTG 0.22 PFLU_RS07785 VacJ family lipoprotein 0.60 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.91 3
Pseudomonas putida KT2440 0.22 PP_2163 VacJ lipoprotein 0.62 PP_0959 phospholipid ABC transporter 0.69 5
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS11785 VacJ family lipoprotein 0.50 LRK54_RS11765 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.94 3
Rhodanobacter denitrificans MT42 0.22 LRK55_RS11510 VacJ family lipoprotein 0.50 LRK55_RS11490 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.98 3
Dinoroseobacter shibae DFL-12 0.22 Dshi_0140 VacJ family lipoprotein (RefSeq) 0.21 Dshi_2379 protein of unknown function DUF140 (RefSeq) 0.90 3
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS11860 VacJ family lipoprotein 0.50 ABZR86_RS11880 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.57 41
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_62 VacJ-like lipoprotein precursor 0.62 Pf1N1B4_1073 Uncharacterized ABC transporter, permease component YrbE
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_02190 hypothetical protein 0.62 AO356_07000 ABC transporter permease 0.75 3
Azospirillum brasilense Sp245 0.21 AZOBR_RS09530 VacJ-like lipoprotein 0.28 AZOBR_RS08345 ABC transporter permease 0.82 1
Pseudomonas sp. RS175 0.21 PFR28_01139 Intermembrane phospholipid transport system lipoprotein MlaA 0.61 PFR28_00180 Intermembrane phospholipid transport system permease protein MlaE 0.95 3
Magnetospirillum magneticum AMB-1 0.21 AMB_RS02240 surface lipoprotein 0.30 AMB_RS10570 ABC transporter permease
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_1910 VacJ-like lipoprotein 0.62 Psyr_4140 Protein of unknown function DUF140 0.44 12
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_1910 VacJ-like lipoprotein 0.62 Psyr_4140 Protein of unknown function DUF140 low > 86
Variovorax sp. SCN45 0.21 GFF5337 Outer-membrane-phospholipid-binding lipoprotein MlaA 0.51 GFF5335 Phospholipid ABC transporter permease protein MlaE low > 127
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2261 VacJ-like lipoprotein precursor 0.62 Pf6N2E2_3259 Uncharacterized ABC transporter, permease component YrbE
Variovorax sp. OAS795 0.21 ABID97_RS23200 VacJ family lipoprotein 0.52 ABID97_RS23210 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.65 4
Phaeobacter inhibens DSM 17395 0.21 PGA1_c29360 VacJ-like lipoprotein 0.23 PGA1_c10870 conserved hypothetical integral membrane protein 0.88 2
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_12110 ABC transporter 0.49 OKGIIK_12130 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.99 4
Azospirillum sp. SherDot2 0.20 MPMX19_00633 Intermembrane phospholipid transport system lipoprotein MlaA 0.28 MPMX19_06141 Intermembrane phospholipid transport system permease protein MlaE low > 112
Caulobacter crescentus NA1000 Δfur 0.18 CCNA_03806 outer membrane lipoprotein 0.28 CCNA_03809 organic solvent resistance transport system permease 0.60 49
Caulobacter crescentus NA1000 0.18 CCNA_03806 outer membrane lipoprotein 0.28 CCNA_03809 organic solvent resistance transport system permease 0.89 4

Not shown: 1 genomes with orthologs for b2346 only; 23 genomes with orthologs for b3194 only