Conservation of cofitness between b2284 and b0431 in Escherichia coli BW25113

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2284 nuoF NADH:ubiquinone oxidoreductase, chain F (NCBI) 1.0 b0431 cyoB cytochrome o ubiquinol oxidase subunit I (NCBI) 0.65 16
Escherichia coli ECOR38 1.00 HEPCGN_22065 nuoF NADH-quinone oxidoreductase subunit NuoF 1.00 HEPCGN_06980 cyoB cytochrome o ubiquinol oxidase subunit I low > 85
Escherichia coli BL21 1.00 ECD_02209 NADH:ubiquinone oxidoreductase, chain F 1.00 ECD_00382 cytochrome o ubiquinol oxidase subunit I low > 60
Escherichia coli ECRC98 1.00 JDDGAC_26825 nuoF NADH-quinone oxidoreductase subunit NuoF 1.00 JDDGAC_12020 cyoB cytochrome o ubiquinol oxidase subunit I — —
Escherichia coli ECRC99 1.00 KEDOAH_05335 nuoF NADH-quinone oxidoreductase subunit NuoF 1.00 KEDOAH_19600 cyoB cytochrome o ubiquinol oxidase subunit I — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01422 NADH-quinone oxidoreductase subunit F 1.00 OHPLBJKB_03242 Cytochrome bo(3) ubiquinol oxidase subunit 1 low > 73
Escherichia coli ECRC101 1.00 OKFHMN_22860 nuoF NADH-quinone oxidoreductase subunit NuoF 1.00 OKFHMN_08365 cyoB cytochrome o ubiquinol oxidase subunit I — —
Escherichia coli ECRC102 1.00 NIAGMN_20630 nuoF NADH-quinone oxidoreductase subunit NuoF 1.00 NIAGMN_06420 cyoB cytochrome o ubiquinol oxidase subunit I — —
Escherichia coli ECRC101 1.00 MCAODC_13900 nuoF NADH-quinone oxidoreductase subunit NuoF 1.00 MCAODC_27590 cyoB cytochrome o ubiquinol oxidase subunit I — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS13265 NADH-quinone oxidoreductase subunit NuoF 1.00 ECOLIN_RS02590 cytochrome o ubiquinol oxidase subunit I 0.88 19
Escherichia fergusonii Becca 1.00 EFB2_01575 NADH-quinone oxidoreductase subunit F 1.00 EFB2_03626 Cytochrome bo(3) ubiquinol oxidase subunit 1 low > 86
Escherichia coli ECRC62 1.00 BNILDI_13400 nuoF NADH-quinone oxidoreductase subunit NuoF 1.00 BNILDI_22715 cyoB cytochrome o ubiquinol oxidase subunit I — —
Escherichia coli ECOR27 1.00 NOLOHH_14480 nuoF NADH-quinone oxidoreductase subunit NuoF 1.00 NOLOHH_01300 cyoB cytochrome o ubiquinol oxidase subunit I low > 57
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.99 GFF1887 NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) 0.95 GFF4345 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.60 54
Enterobacter asburiae PDN3 0.96 EX28DRAFT_0325 NADH-quinone oxidoreductase, F subunit 0.95 EX28DRAFT_2540 cytochrome o ubiquinol oxidase, subunit I low > 76
Klebsiella michiganensis M5al 0.96 BWI76_RS20170 NADH-quinone oxidoreductase subunit F 0.94 BWI76_RS06490 cytochrome ubiquinol oxidase subunit I 0.59 14
Enterobacter sp. TBS_079 0.96 MPMX20_03214 NADH-quinone oxidoreductase subunit F 0.95 MPMX20_01022 Cytochrome bo(3) ubiquinol oxidase subunit 1 low > 85
Pantoea sp. MT58 0.91 IAI47_06380 NADH-quinone oxidoreductase subunit NuoF 0.88 IAI47_14685 cytochrome o ubiquinol oxidase subunit I 0.66 17
Serratia liquefaciens MT49 0.91 IAI46_17690 NADH-quinone oxidoreductase subunit NuoF 0.88 IAI46_04980 cytochrome o ubiquinol oxidase subunit I low > 86
Erwinia tracheiphila SCR3 0.90 LU632_RS07985 nuoF NADH-quinone oxidoreductase subunit NuoF 0.88 LU632_RS18380 cyoB cytochrome o ubiquinol oxidase subunit I — —
Rahnella sp. WP5 0.90 EX31_RS19415 NADH-quinone oxidoreductase subunit NuoF 0.86 EX31_RS22215 cytochrome o ubiquinol oxidase subunit I 0.82 4
Pectobacterium carotovorum WPP14 0.89 HER17_RS07145 NADH-quinone oxidoreductase subunit NuoF 0.87 HER17_RS15880 cytochrome o ubiquinol oxidase subunit I — —
Dickeya dadantii 3937 0.88 DDA3937_RS14315 NADH-quinone oxidoreductase subunit NuoF 0.87 DDA3937_RS05610 cytochrome o ubiquinol oxidase subunit I — —
Dickeya dianthicola 67-19 0.88 HGI48_RS14290 NADH-quinone oxidoreductase subunit NuoF 0.87 HGI48_RS05655 cytochrome o ubiquinol oxidase subunit I — —
Dickeya dianthicola ME23 0.88 DZA65_RS14965 NADH-quinone oxidoreductase subunit NuoF 0.87 DZA65_RS05980 cytochrome o ubiquinol oxidase subunit I — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_3201 NADH dehydrogenase subunit F 0.71 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein — —
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_3201 NADH dehydrogenase subunit F 0.71 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein — —
Pseudomonas putida KT2440 0.76 PP_4123 NADH-quinone oxidoreductase subunit F 0.71 PP_0813 cytochrome bo terminal oxidase subunit I — —
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS18635 NADH-quinone oxidoreductase subunit NuoF 0.72 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I low > 109
Pseudomonas fluorescens SBW25 0.75 PFLU_RS18635 NADH-quinone oxidoreductase subunit NuoF 0.72 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I low > 109
Pseudomonas simiae WCS417 0.75 PS417_16595 NADH dehydrogenase 0.71 PS417_23385 cytochrome o ubiquinol oxidase subunit I — —
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_2629 NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) 0.67 PfGW456L13_4935 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) — —
Pseudomonas sp. RS175 0.75 PFR28_02631 NADH-quinone oxidoreductase subunit F 0.69 PFR28_00243 Cytochrome bo(3) ubiquinol oxidase subunit 1 — —
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_27760 NADH dehydrogenase 0.70 AO353_15455 cytochrome o ubiquinol oxidase subunit I — —
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_273 NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) 0.69 Pf6N2E2_5318 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) — —
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_4037 NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) 0.70 Pf1N1B4_972 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) — —
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_22050 NADH dehydrogenase 0.69 AO356_16965 cytochrome o ubiquinol oxidase subunit I — —
Acinetobacter radioresistens SK82 0.62 MPMX26_02551 NADH-quinone oxidoreductase subunit F 0.68 MPMX26_01161 Cytochrome bo(3) ubiquinol oxidase subunit 1 — —
Sinorhizobium meliloti 1021 0.45 SMa1525 NuoF2 NADH I chain F 0.68 SM_b21488 cytochrome o ubiquinol oxidase subunit I low > 103
Mycobacterium tuberculosis H37Rv 0.44 Rv3150 Probable NADH dehydrogenase I (chain F) NuoF (NADH-ubiquinone oxidoreductase chain F) 0.30 Rv3043c Probable cytochrome C oxidase polypeptide I CtaD (cytochrome AA3 subunit 1) — —
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS23555 NADH-quinone oxidoreductase subunit F 0.23 CA265_RS17815 cytochrome c oxidase subunit I — —
Dinoroseobacter shibae DFL-12 0.37 Dshi_1316 NADH-quinone oxidoreductase, F subunit (RefSeq) 0.26 Dshi_2383 Cytochrome c oxidase subunit I type (RefSeq) — —
Azospirillum brasilense Sp245 0.37 AZOBR_RS07190 NADH dehydrogenase 0.68 AZOBR_RS23175 cytochrome O ubiquinol oxidase — —
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_0704 NADH-quinone oxidoreductase, F subunit 0.65 Ga0059261_1565 cytochrome bo3 quinol oxidase subunit 1 apoprotein (EC 1.10.3.-) — —
Paraburkholderia graminis OAS925 0.37 ABIE53_001595 NADH-quinone oxidoreductase subunit F 0.66 ABIE53_005341 cytochrome o ubiquinol oxidase subunit 1 — —
Variovorax sp. SCN45 0.37 GFF4755 NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) 0.68 GFF5677 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) — —
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_04572 NADH dehydrogenase subunit F 0.65 H281DRAFT_03427 cytochrome bo3 quinol oxidase subunit 1 apoprotein — —
Lysobacter sp. OAE881 0.37 ABIE51_RS08335 NADH-quinone oxidoreductase subunit NuoF 0.67 ABIE51_RS09770 cytochrome o ubiquinol oxidase subunit I — —
Azospirillum sp. SherDot2 0.37 MPMX19_01741 NADH-quinone oxidoreductase subunit F 0.69 MPMX19_06176 Cytochrome bo(3) ubiquinol oxidase subunit 1 — —
Variovorax sp. OAS795 0.37 ABID97_RS20470 NADH-quinone oxidoreductase subunit NuoF 0.68 ABID97_RS07635 cytochrome o ubiquinol oxidase subunit I — —
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS08845 NADH dehydrogenase 0.69 HSERO_RS12315 cytochrome O ubiquinol oxidase — —
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS06650 NADH dehydrogenase 0.70 BPHYT_RS24920 cytochrome O ubiquinol oxidase — —
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS05535 NADH dehydrogenase 0.72 RR42_RS32595 cytochrome o ubiquinol oxidase subunit I — —
Bosea sp. OAE506 0.36 ABIE41_RS17925 NADH-quinone oxidoreductase subunit NuoF 0.66 ABIE41_RS21025 cytochrome o ubiquinol oxidase subunit I — —
Ralstonia solanacearum GMI1000 0.36 RS_RS10320 NADH-quinone oxidoreductase subunit F 0.71 RS_RS14605 cytochrome o ubiquinol oxidase subunit I — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS02950 NADH-quinone oxidoreductase subunit F 0.71 RALBFv3_RS06655 cytochrome o ubiquinol oxidase subunit I — —
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS14855 NADH-quinone oxidoreductase subunit NuoF 0.72 ABZR87_RS02330 cytochrome o ubiquinol oxidase subunit I — —
Ralstonia solanacearum UW163 0.36 UW163_RS10775 NADH-quinone oxidoreductase subunit F 0.71 UW163_RS06970 cytochrome o ubiquinol oxidase subunit I — —
Acidovorax sp. GW101-3H11 0.36 Ac3H11_1447 NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) 0.63 Ac3H11_3142 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS06390 NADH-quinone oxidoreductase subunit NuoF 0.67 A4249_RS04450 cytochrome o ubiquinol oxidase subunit I — —
Rhizobium sp. OAE497 0.36 ABIE40_RS07205 NADH-quinone oxidoreductase subunit NuoF 0.69 ABIE40_RS19820 cytochrome o ubiquinol oxidase subunit I — —
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS06090 NADH-quinone oxidoreductase subunit NuoF 0.66 ABZR86_RS07620 cytochrome o ubiquinol oxidase subunit I — —
Ralstonia solanacearum PSI07 0.35 RPSI07_RS14360 NADH-quinone oxidoreductase subunit F 0.72 RPSI07_RS10570 cytochrome o ubiquinol oxidase subunit I — —
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1988.1 NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) 0.71 Xcc-8004.3816.1 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS24125 NADH-quinone oxidoreductase subunit NuoF 0.72 QEN71_RS15345 cytochrome o ubiquinol oxidase subunit I — —
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_02024 NADH-quinone oxidoreductase chain F 0.69 CCNA_01850 quinol cytochrome oxidase polypeptide I — —
Caulobacter crescentus NA1000 0.35 CCNA_02024 NADH-quinone oxidoreductase chain F 0.69 CCNA_01850 quinol cytochrome oxidase polypeptide I — —
Agrobacterium fabrum C58 0.35 Atu1275 NADH ubiquinone oxidoreductase chain F 0.69 Atu0141 cytochrome O ubiquinol oxidase subunit I — —

Not shown: 15 genomes with orthologs for b2284 only; 4 genomes with orthologs for b0431 only