Conservation of cofitness between Rru_A2161 and Rru_A1015 in Rhodospirillum rubrum S1H

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A2161 Polyphosphate kinase (NCBI) 1.0 Rru_A1015 Binding-protein-dependent transport systems inner membrane component (NCBI) 0.55 20
Magnetospirillum magneticum AMB-1 0.63 AMB_RS14295 RNA degradosome polyphosphate kinase 0.64 AMB_RS13195 putrescine ABC transporter permease PotI — —
Azospirillum brasilense Sp245 0.60 AZOBR_RS16235 polyphosphate kinase 0.68 AZOBR_RS08830 putrescine/spermidine ABC transporter permease low > 97
Azospirillum sp. SherDot2 0.60 MPMX19_01149 Polyphosphate kinase 0.70 MPMX19_04880 Inner membrane ABC transporter permease protein YdcV low > 112
Caulobacter crescentus NA1000 0.57 CCNA_01782 polyphosphate kinase 1 0.35 CCNA_03236 spermidine/putrescine transport system permease protein potC low > 66
Caulobacter crescentus NA1000 Δfur 0.57 CCNA_01782 polyphosphate kinase 1 0.35 CCNA_03236 spermidine/putrescine transport system permease protein potC low > 67
Bosea sp. OAE506 0.56 ABIE41_RS16125 RNA degradosome polyphosphate kinase 0.50 ABIE41_RS21635 ABC transporter permease subunit low > 77
Rhodopseudomonas palustris CGA009 0.56 TX73_015770 RNA degradosome polyphosphate kinase 0.55 TX73_021555 ABC transporter permease subunit low > 86
Agrobacterium fabrum C58 0.55 Atu1144 polyphosphate kinase 0.51 Atu0612 ABC transporter, membrane spanning protein — —
Rhizobium sp. OAE497 0.54 ABIE40_RS06575 RNA degradosome polyphosphate kinase 0.54 ABIE40_RS03280 ABC transporter permease subunit low > 107
Sinorhizobium meliloti 1021 0.54 SMc00618 polyphosphate kinase 0.57 SMc00773 putrescine ABC transporter permease low > 103
Pseudomonas sp. S08-1 0.36 OH686_13995 polyphosphate kinase 1 0.55 OH686_11445 Putrescine transport system permease protein PotI 0.59 54
Pseudomonas stutzeri RCH2 0.36 Psest_3732 polyphosphate kinase 1 0.56 Psest_4280 ABC-type spermidine/putrescine transport system, permease component II low > 67
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4453 Polyphosphate kinase (EC 2.7.4.1) 0.54 Pf6N2E2_4517 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 103
Pseudomonas simiae WCS417 0.35 PS417_27435 polyphosphate kinase 0.53 PS417_27105 spermidine/putrescine ABC transporter permease low > 88
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS29095 polyphosphate kinase 1 0.53 PFLU_RS28755 ABC transporter permease subunit low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS29095 polyphosphate kinase 1 0.53 PFLU_RS28755 ABC transporter permease subunit low > 109
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_08885 polyphosphate kinase 0.54 AO353_08560 spermidine/putrescine ABC transporter permease low > 101
Pseudomonas putida KT2440 0.35 PP_5217 Polyphosphate kinase 0.54 PP_5177 spermidine/putrescine ABC transporter - permease subunit low > 96
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2208 Polyphosphate kinase (EC 2.7.4.1) 0.55 Pf1N1B4_4350 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 87
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_874 Polyphosphate kinase (EC 2.7.4.1) 0.53 PfGW456L13_932 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0293 Polyphosphate kinase 0.54 Psyr_4861 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas sp. RS175 0.34 PFR28_04345 Polyphosphate kinase 0.55 PFR28_04291 Inner membrane ABC transporter permease protein YdcV 0.33 59
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0293 Polyphosphate kinase 0.54 Psyr_4861 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_12895 polyphosphate kinase 0.53 AO356_13175 spermidine/putrescine ABC transporter permease low > 104
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS14110 polyphosphate kinase 0.60 BPHYT_RS23135 putrescine/spermidine ABC transporter permease — —
Paraburkholderia graminis OAS925 0.33 ABIE53_002988 polyphosphate kinase 0.54 ABIE53_002367 putrescine transport system permease protein 0.34 111
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS04860 polyphosphate kinase 1 0.56 QEN71_RS07135 ABC transporter permease subunit low > 153
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_04418 polyphosphate kinase 0.54 H281DRAFT_05183 putrescine transport system permease protein low > 103
Marinobacter adhaerens HP15 0.32 HP15_3334 polyphosphate kinase 0.61 HP15_937 spermidine/putrescine ABC transporter, permease protein low > 73
Castellaniella sp019104865 MT123 0.31 ABCV34_RS15580 polyphosphate kinase 1 0.53 ABCV34_RS02375 ABC transporter permease subunit low > 48
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.4064.1 Polyphosphate kinase (EC 2.7.4.1) 0.55 Xcc-8004.2212.1 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF4226 Polyphosphate kinase (EC 2.7.4.1) 0.44 GFF2032 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 90
Enterobacter sp. TBS_079 0.24 MPMX20_03356 Polyphosphate kinase 0.57 MPMX20_01498 Inner membrane ABC transporter permease protein YdcV low > 85
Parabacteroides merdae CL09T00C40 0.24 HMPREF1078_RS16770 RNA degradosome polyphosphate kinase 0.28 HMPREF1078_RS08110 ABC transporter permease low > 61
Escherichia coli ECOR27 0.24 NOLOHH_13450 ppk1 polyphosphate kinase 1 0.55 NOLOHH_22315 potI putrescine ABC transporter permease PotI low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01225 Polyphosphate kinase 0.55 OHPLBJKB_02811 Inner membrane ABC transporter permease protein YdcV low > 73
Escherichia coli ECRC62 0.24 BNILDI_12260 ppk1 polyphosphate kinase 1 0.55 BNILDI_20570 potH putrescine ABC transporter permease PotH low > 75
Escherichia coli ECRC98 0.24 JDDGAC_25745 ppk1 polyphosphate kinase 1 0.55 JDDGAC_09580 potI putrescine ABC transporter permease PotI low > 86
Escherichia coli ECRC99 0.24 KEDOAH_06420 ppk1 polyphosphate kinase 1 0.55 KEDOAH_21965 potI putrescine ABC transporter permease PotI — —
Escherichia coli BW25113 0.24 b2501 ppk polyphosphate kinase (NCBI) 0.55 b0857 potI putrescine transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Escherichia coli ECRC101 0.24 MCAODC_12330 ppk1 polyphosphate kinase 1 0.55 MCAODC_25160 potI putrescine ABC transporter permease PotI low > 87
Escherichia fergusonii Becca 0.24 EFB2_01397 Polyphosphate kinase 0.55 EFB2_03204 Inner membrane ABC transporter permease protein YdcV low > 86
Escherichia coli Nissle 1917 0.24 ECOLIN_RS14200 polyphosphate kinase 1 0.55 ECOLIN_RS04565 putrescine ABC transporter permease PotI — —
Escherichia coli ECRC102 0.24 NIAGMN_19570 ppk1 polyphosphate kinase 1 0.55 NIAGMN_03990 potI putrescine ABC transporter permease PotI — —
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS08035 RNA degradosome polyphosphate kinase 0.28 HMPREF1181_RS12430 ABC transporter permease low > 56
Escherichia coli ECOR38 0.24 HEPCGN_20965 ppk1 polyphosphate kinase 1 0.55 HEPCGN_02085 potI putrescine ABC transporter permease PotI low > 87
Escherichia coli ECRC100 0.24 OKFHMN_21800 ppk1 polyphosphate kinase 1 0.55 OKFHMN_05945 potI putrescine ABC transporter permease PotI low > 80
Escherichia coli BL21 0.24 ECD_02393 polyphosphate kinase, component of RNA degradosome 0.55 ECD_00862 putrescine ABC transporter permease low > 61
Pantoea sp. MT58 0.24 IAI47_05155 polyphosphate kinase 1 0.57 IAI47_13030 putrescine ABC transporter permease PotI low > 76
Klebsiella michiganensis M5al 0.24 BWI76_RS20995 RNA degradosome polyphosphate kinase 0.56 BWI76_RS09475 putrescine ABC transporter permease PotI low > 92
Enterobacter asburiae PDN3 0.24 EX28DRAFT_0166 polyphosphate kinase 1 0.57 EX28DRAFT_2096 ABC-type spermidine/putrescine transport system, permease component II low > 76
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_03780 polyphosphate kinase 1 0.37 CSW01_07150 spermidine/putrescine ABC transporter permease PotC low > 62
Pectobacterium carotovorum WPP14 0.24 HER17_RS06425 polyphosphate kinase 1 0.58 HER17_RS12485 putrescine ABC transporter permease PotI low > 75
Rahnella sp. WP5 0.24 EX31_RS22680 polyphosphate kinase 1 0.58 EX31_RS09615 putrescine ABC transporter permease PotI low > 89
Serratia liquefaciens MT49 0.24 IAI46_18915 polyphosphate kinase 1 0.59 IAI46_08385 putrescine ABC transporter permease PotI low > 86
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS14955 RNA degradosome polyphosphate kinase 0.26 ABI39_RS17810 ABC transporter permease low > 72
Dickeya dadantii 3937 0.23 DDA3937_RS15150 polyphosphate kinase 1 0.58 DDA3937_RS09475 putrescine ABC transporter permease PotI low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF2167 Polyphosphate kinase (EC 2.7.4.1) 0.59 GFF761 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 78
Dickeya dianthicola ME23 0.23 DZA65_RS16045 polyphosphate kinase 1 0.58 DZA65_RS09805 putrescine ABC transporter permease PotI low > 75
Shewanella loihica PV-4 0.23 Shew_3079 polyphosphate kinase (RefSeq) 0.57 Shew_0976 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 60
Shewanella amazonensis SB2B 0.23 Sama_2011 polyphosphate kinase (RefSeq) 0.57 Sama_2639 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 62
Dickeya dianthicola 67-19 0.23 HGI48_RS15225 polyphosphate kinase 1 0.58 HGI48_RS09495 putrescine ABC transporter permease PotI low > 71
Bacteroides thetaiotaomicron VPI-5482 0.23 BT0541 Polyphosphate kinase (NCBI ptt file) 0.26 BT1289 putrescine transport system permease protein potI (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS02340 RNA degradosome polyphosphate kinase 0.26 HMPREF1058_RS03230 ABC transporter permease low > 67
Shewanella sp. ANA-3 0.22 Shewana3_2417 polyphosphate kinase (RefSeq) 0.60 Shewana3_3094 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 73
Bacteroides ovatus ATCC 8483 0.22 BACOVA_01446 polyphosphate kinase 1 0.25 BACOVA_00084 ABC transporter, permease protein low > 94

Not shown: 30 genomes with orthologs for Rru_A2161 only; 5 genomes with orthologs for Rru_A1015 only