| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Sinorhizobium meliloti 1021 | SMa1966 | | LysR family transcriptional regulator | insig. | 100 | 100 |
| o | Agrobacterium fabrum C58 | Atu4288 | | LysR family transcriptional regulator | insig. | 88 | 80 |
| o | Variovorax sp. OAS795 | ABID97_RS11265 | | LysR family transcriptional regulator | insig. | 72 | 80 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2393 | | Transcriptional regulator, LysR family | insig. | 72 | 80 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_02840 | | LuxR family transcriptional regulator | insig. | 71 | 80 |
| o | Pseudomonas sp. RS175 | PFR28_01035 | | HTH-type transcriptional regulator PgrR | insig. | 70 | 80 |
| o | Enterobacter sp. TBS_079 | MPMX20_00940 | | HTH-type transcriptional regulator DmlR | insig. | 69 | 81 |
| o | Pseudomonas sp. S08-1 | OH686_22430 | | Transcriptional regulator, LysR family | cofit | 66 | 81 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS06860 | | LysR family transcriptional regulator | insig. | 55 | 81 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_688 | | Transcriptional regulator, LysR family | insig. | 47 | 80 |
| o | Pseudomonas simiae WCS417 | PS417_19010 | | LysR family transcriptional regulator | insig. | 46 | 80 |
| | Pseudomonas sp. RS175 | PFR28_01795 | | HTH-type transcriptional regulator PgrR | insig. | 47 | 80 |
| o | Pseudomonas sp. DMC3 | GFF1055 | | HTH-type transcriptional regulator PgrR | cofit | 46 | 85 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS13100 | | LysR family transcriptional regulator | sig. | 49 | 80 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_24995 | | LysR family transcriptional regulator | insig. | 47 | 80 |
| o | Pseudomonas putida KT2440 | PP_2502 | | Transcriptional regulator, LysR family | insig. | 48 | 80 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1429 | | Transcriptional regulator, LysR family | insig. | 46 | 80 |
| | Pseudomonas sp. S08-1 | OH686_23140 | | Transcriptional regulator, LysR family | insig. | 47 | 80 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2751 | | Transcriptional regulator, LysR family | insig. | 46 | 80 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_2376 | | Transcriptional regulator, LysR family | insig. | 46 | 80 |
| o | Pseudomonas sp. SVBP6 | COO64_RS08305 | | LysR family transcriptional regulator | insig. | 47 | 80 |
| | Variovorax sp. OAS795 | ABID97_RS03060 | | LysR substrate-binding domain-containing protein | insig. | 45 | 80 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS11555 | | LysR family transcriptional regulator | insig. | 46 | 80 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00019 | | transcriptional regulator, LysR family | insig. | 45 | 79 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS08390 | | LysR family transcriptional regulator | insig. | 47 | 84 |
| o | Pseudomonas sp. BP01 | JOY50_RS07585 | | LysR family transcriptional regulator | insig. | 45 | 81 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_28120 | | LysR family transcriptional regulator | insig. | 44 | 81 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS20610 | | LysR family transcriptional regulator | insig. | 47 | 80 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS30415 | | LysR family transcriptional regulator | insig. | 45 | 80 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS21335 | | LysR family transcriptional regulator | insig. | 38 | 79 |
| | Azospirillum sp. SherDot2 | MPMX19_05327 | | HTH-type transcriptional regulator PgrR | insig. | 38 | 78 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5905 | | Transcriptional regulator, LysR family | insig. | 38 | 78 |
| | Agrobacterium fabrum C58 | Atu4591 | | LysR family transcriptional regulator | insig. | 37 | 80 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37940 | | LysR family transcriptional regulator | insig. | 36 | 81 |
| | Paraburkholderia graminis OAS925 | ABIE53_002538 | | DNA-binding transcriptional LysR family regulator | sig. | 37 | 79 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18050 | | LysR family transcriptional regulator | insig. | 37 | 78 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18050 | | LysR family transcriptional regulator | insig. | 37 | 78 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_14620 | | LysR family transcriptional regulator | sig. | 35 | 79 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10935 | | LysR family transcriptional regulator | insig. | 34 | 79 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS06700 | | LysR family transcriptional regulator | insig. | 36 | 77 |
| | Ralstonia solanacearum UW163 | UW163_RS06915 | | LysR family transcriptional regulator | insig. | 36 | 77 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02593 | | HTH-type transcriptional regulator DmlR | cofit | 36 | 78 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3857 | | Transcriptional regulator, LysR family | insig. | 37 | 78 |
| | Pseudomonas orientalis W4I3 | QF045_RS13895 | | LysR family transcriptional regulator | insig. | 37 | 78 |
| | Methylophilus sp. DMC18 | GFF2818 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 78 |
| | Caulobacter crescentus NA1000 | CCNA_02602 | | LysR-family transcriptional regulator | insig. | 37 | 82 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02602 | | LysR-family transcriptional regulator | insig. | 37 | 82 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00578 | | transcriptional regulator, LysR family | insig. | 36 | 79 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_23640 | | LysR family transcriptional regulator | insig. | 35 | 79 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01123 | | transcriptional regulator, LysR family | insig. | 38 | 79 |
| | Variovorax sp. OAS795 | ABID97_RS15825 | | LysR substrate-binding domain-containing protein | insig. | 36 | 80 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 35 | 79 |
| | Pseudomonas stutzeri RCH2 | Psest_2163 | | Transcriptional regulator | insig. | 35 | 79 |
| | Dechlorosoma suillum PS | Dsui_2353 | | transcriptional regulator | insig. | 34 | 80 |
| | Pantoea sp. MT58 | IAI47_16730 | | LysR family transcriptional regulator | insig. | 34 | 83 |
| | Xanthobacter sp. DMC5 | GFF2907 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 80 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS08890 | | LysR family transcriptional regulator | cofit | 34 | 80 |
| | Pseudomonas stutzeri RCH2 | Psest_2817 | | Transcriptional regulator | insig. | 38 | 69 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22295 | | LysR family transcriptional regulator | insig. | 37 | 78 |
| | Dechlorosoma suillum PS | Dsui_0016 | | transcriptional regulator | strong | 37 | 80 |
| | Azospirillum sp. SherDot2 | MPMX19_04565 | | HTH-type transcriptional regulator PgrR | insig. | 37 | 79 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12295 | | LysR family transcriptional regulator | sig. | 35 | 79 |
| | Azospirillum brasilense Sp245 | AZOBR_RS16520 | | LysR family transcriptional regulator | insig. | 37 | 78 |
| | Pseudomonas simiae WCS417 | PS417_16085 | | LysR family transcriptional regulator | insig. | 36 | 78 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS02605 | | LysR family transcriptional regulator | insig. | 34 | 79 |
| | Pseudomonas sp. RS175 | PFR28_00753 | | HTH-type transcriptional regulator DmlR | insig. | 34 | 79 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30490 | | LysR family transcriptional regulator | insig. | 35 | 79 |
| | Xanthobacter sp. DMC5 | GFF2647 | | HTH-type transcriptional regulator DmlR | insig. | 39 | 78 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS20365 | | LysR family transcriptional regulator | insig. | 37 | 79 |
| | Rhizobium sp. OAE497 | ABIE40_RS03550 | | LysR family transcriptional regulator | strong | 36 | 79 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS11615 | | LysR family transcriptional regulator | sig. | 35 | 80 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS19825 | | LysR family transcriptional regulator | insig. | 35 | 80 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_29255 | | LysR family transcriptional regulator | insig. | 34 | 73 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0884 | | Transcriptional regulator | insig. | 39 | 82 |
| | Shewanella sp. ANA-3 | Shewana3_1836 | | LysR family transcriptional regulator (RefSeq) | insig. | 34 | 78 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4454 | | Transcriptional regulator, LysR family | insig. | 34 | 79 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03187 | | transcriptional regulator, LysR family | sig. | 33 | 83 |
| | Shewanella oneidensis MR-1 | SOA0165 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 33 | 78 |
| | Shewanella oneidensis MR-1 | SO2053 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 34 | 78 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 35 | 79 |
| | Paraburkholderia graminis OAS925 | ABIE53_004109 | | LysR family transcriptional regulator for bpeEF and oprC | strong | 34 | 83 |
| | Pseudomonas sp. DMC3 | GFF943 | | HTH-type transcriptional regulator DmlR | cofit | 36 | 78 |
| | Pseudomonas sp. DMC3 | GFF1175 | | HTH-type transcriptional regulator DmlR | cofit | 34 | 79 |
| | Pseudomonas sp. BP01 | JOY50_RS04745 | | LysR family transcriptional regulator | insig. | 36 | 78 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 36 | 79 |
| | Pseudomonas sp. DMC3 | GFF3562 | | HTH-type transcriptional regulator DmlR | insig. | 35 | 79 |
| | Rahnella sp. WP5 | EX31_RS07465 | | LysR family transcriptional regulator | insig. | 34 | 79 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20090 | | LysR family transcriptional regulator | insig. | 32 | 83 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19415 | | LysR family transcriptional regulator | insig. | 31 | 79 |
| | Ralstonia solanacearum GMI1000 | RS_RS11675 | | LysR family transcriptional regulator | insig. | 36 | 79 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS20745 | | LysR family transcriptional regulator | insig. | 35 | 79 |
| | Pseudomonas putida KT2440 | PP_3811 | | Transcriptional regulator, LysR family | insig. | 34 | 78 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15410 | | LysR family transcriptional regulator | cofit | 33 | 79 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_19120 | | LysR family transcriptional regulator | insig. | 32 | 80 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS12185 | | LysR family transcriptional regulator | insig. | 36 | 80 |
| | Ralstonia solanacearum GMI1000 | RS_RS22475 | | LysR family transcriptional regulator | strong | 34 | 79 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01140 | | LysR family transcriptional regulator | cofit | 39 | 81 |
| | Rahnella sp. WP5 | EX31_RS16730 | | LysR family transcriptional regulator | insig. | 36 | 78 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0123 | | transcriptional regulator, LysR family (RefSeq) | sig. | 34 | 79 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS18390 | | LysR family transcriptional regulator | strong | 34 | 80 |