Homologs of Rv3000 from Mycobacterium tuberculosis H37Rv

Possible conserved transmembrane protein
SEED: YbbM seven transmembrane helix protein
KEGG: putative ABC transport system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Mycobacterium tuberculosis H37Rv Rv3000 Possible conserved transmembrane protein insig. 100 100
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4409 YbbM seven transmembrane helix protein cofit 38 60
  Enterobacter sp. TBS_079 MPMX20_01089 putative iron export permease protein FetB strong 43 46
  Serratia liquefaciens MT49 IAI46_24035 iron export ABC transporter permease subunit FetB insig. 43 47
  Escherichia coli ECOR27 NOLOHH_00980 fetB iron export ABC transporter permease subunit FetB insig. 43 45
  Escherichia coli ECRC62 BNILDI_22400 fetB iron export ABC transporter permease subunit FetB insig. 43 45
  Escherichia coli BL21 ECD_00442 iron export ABC transporter permease; peroxide resistance protein insig. 43 45
  Escherichia fergusonii Becca EFB2_03564 putative iron export permease protein FetB insig. 43 45
  Escherichia coli ECOR38 HEPCGN_06625 fetB iron export ABC transporter permease subunit FetB insig. 43 45
  Escherichia coli ECRC100 OKFHMN_07990 fetB iron export ABC transporter permease subunit FetB cofit 43 45
  Escherichia coli ECRC101 MCAODC_27205 fetB iron export ABC transporter permease subunit FetB sig. 43 45
  Escherichia coli ECRC102 NIAGMN_06040 fetB iron export ABC transporter permease subunit FetB cofit 43 45
  Escherichia coli ECRC99 KEDOAH_19980 fetB iron export ABC transporter permease subunit FetB no data 43 45
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03183 putative iron export permease protein FetB insig. 43 45
  Escherichia coli BW25113 b0491 ybbM putative metal resistance protein (VIMSS) sig. 43 45
  Desulfovibrio vulgaris Miyazaki F DvMF_1727 hypothetical protein (RefSeq) insig. 49 45
  Escherichia coli ECRC98 JDDGAC_11635 fetB iron export ABC transporter permease subunit FetB insig. 43 45
  Enterobacter asburiae PDN3 EX28DRAFT_2468 TIGR00245 family protein insig. 43 45
  Klebsiella pneumoniae MKP103 KDGMDA_14970 iron export ABC transporter permease subunit FetB insig. 43 45
  Ralstonia solanacearum PSI07 RPSI07_RS20240 iron export ABC transporter permease subunit FetB insig. 34 95
  Klebsiella michiganensis M5al BWI76_RS06930 iron export ABC transporter permease subunit FetB strong 43 45
  Desulfovibrio vulgaris Hildenborough JW710 DVU0485 membrane protein, putative (TIGR) sig. 51 46
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12985 iron export ABC transporter permease subunit FetB insig. 34 95
  Ralstonia solanacearum UW163 UW163_RS00580 iron export ABC transporter permease subunit FetB insig. 34 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS09060 iron export ABC transporter permease subunit FetB insig. 35 95
  Rahnella sp. WP5 EX31_RS06985 iron export ABC transporter permease subunit FetB insig. 43 43
  Pseudomonas fluorescens SBW25 PFLU_RS19595 iron export ABC transporter permease subunit FetB insig. 42 48
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19595 iron export ABC transporter permease subunit FetB sig. 42 48
  Rhodospirillum rubrum S1H Rru_A0881 ABC transporter component (NCBI) insig. 40 54
  Pseudomonas simiae WCS417 PS417_17980 ABC transporter permease insig. 42 48
  Pantoea sp. MT58 IAI47_19870 iron export ABC transporter permease subunit FetB insig. 40 44
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08165 iron export ABC transporter permease subunit FetB cofit 40 45
  Burkholderia phytofirmans PsJN BPHYT_RS09240 ABC transporter permease insig. 43 43
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00869 putative ABC transport system permease protein strong 43 43
  Paraburkholderia graminis OAS925 ABIE53_002085 putative ABC transport system permease protein insig. 43 43
  Synechocystis sp000284455 PCC 6803 SGL_RS11655 iron export ABC transporter permease subunit FetB strong 38 45
  Ralstonia solanacearum GMI1000 RS_RS03770 iron export ABC transporter permease subunit FetB insig. 35 95
  Marinobacter adhaerens HP15 HP15_3395 conserved hypothetical protein CHP00245 cofit 41 42
  Alteromonas macleodii MIT1002 MIT1002_01305 Putative multidrug export ATP-binding/permease protein insig. 40 44
  Azospirillum brasilense Sp245 AZOBR_RS10775 ABC transporter permease insig. 45 40
  Shewanella amazonensis SB2B Sama_0659 ABC transporter, ATP-binding protein (RefSeq) insig. 39 47
  Paraburkholderia sabiae LMG 24235 QEN71_RS22120 iron export ABC transporter permease subunit FetB insig. 35 63
  Shewanella sp. ANA-3 Shewana3_3526 ABC transporter related (RefSeq) insig. 38 47
  Bosea sp. OAE506 ABIE41_RS20845 ABC transporter ATP-binding protein/permease insig. 39 40
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3699 ABC transporter ATP-binding protein insig. 36 43
  Shewanella oneidensis MR-1 SO0754 ABC transporter, ATP-binding protein (NCBI ptt file) insig. 38 47
  Xanthobacter sp. DMC5 GFF2311 Beta-(1-->2)glucan export ATP-binding/permease protein NdvA insig. 36 50
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4532 Lipid A export ATP-binding/permease protein MsbA no data 42 49
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00314 ATP-binding cassette, subfamily B, MsbA no data 45 38
  Pseudomonas fluorescens FW300-N2E3 AO353_00535 ABC transporter ATP-binding protein insig. 39 45
  Acinetobacter radioresistens SK82 MPMX26_00231 Putative multidrug export ATP-binding/permease protein insig. 34 49
  Bosea sp. OAE506 ABIE41_RS06065 glucan ABC transporter ATP-binding protein/ permease strong 34 50
  Pseudomonas sp. BP01 JOY50_RS24950 ABC transporter transmembrane domain-containing protein insig. 47 37
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1546 ABC transporter protein IroC insig. 41 46
  Escherichia coli Nissle 1917 ECOLIN_RS11380 yersiniabactin ABC transporter ATP-binding/permease protein YbtP insig. 38 46
  Escherichia fergusonii Becca EFB2_01943 Vitamin B12 import ATP-binding protein BtuD insig. 38 46
  Escherichia coli ECOR38 HEPCGN_03580 ybtP yersiniabactin ABC transporter ATP-binding/permease protein YbtP insig. 38 46
  Klebsiella michiganensis M5al BWI76_RS14520 hypothetical protein sig. 37 46
  Burkholderia phytofirmans PsJN BPHYT_RS06180 ATP-binding protein no data 42 40
  Azospirillum sp. SherDot2 MPMX19_01923 Putative multidrug export ATP-binding/permease protein insig. 44 42
  Desulfovibrio vulgaris Hildenborough JW710 DVU1671 msbA ABC transporter, ATP-binding protein/permease protein (TIGR) no data 38 44
  Methanococcus maripaludis JJ MMJJ_RS04530 iron export ABC transporter permease subunit FetB sig. 41 40
  Ralstonia solanacearum UW163 UW163_RS02045 ABC transporter ATP-binding protein/permease insig. 40 43
  Variovorax sp. SCN45 GFF4767 Efflux ABC transporter, permease/ATP-binding protein insig. 42 39
  Pseudomonas putida KT2440 PP_3466 putative ABC efflux transporter, permease/ATP-binding protein insig. 42 41
  Methanococcus maripaludis S2 MMP_RS00960 iron export ABC transporter permease subunit FetB insig. 41 40
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11540 ABC transporter ATP-binding protein/permease insig. 40 43
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4046 Lipid A export ATP-binding/permease protein MsbA insig. 40 45
  Shewanella amazonensis SB2B Sama_2908 ABC transporter, ATP-binding/permease protein, putative (RefSeq) insig. 41 39
  Herbaspirillum seropedicae SmR1 HSERO_RS17210 ABC transporter insig. 40 42
  Variovorax sp. OAS795 ABID97_RS20410 ABC transporter transmembrane domain-containing protein insig. 38 43
  Pseudomonas putida KT2440 PP_2119 putative ABC efflux transporter, permease/ATP-binding protein insig. 47 34
  Escherichia coli ECOR38 HEPCGN_06885 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein insig. 41 51
  Burkholderia phytofirmans PsJN BPHYT_RS20895 ABC transporter insig. 43 34
  Ralstonia solanacearum GMI1000 RS_RS11040 lipid A export ATP-binding/permease MsbA no data 42 42
  Kangiella aquimarina DSM 16071 B158DRAFT_1598 lipid A export permease/ATP-binding protein MsbA no data 37 41
  Shewanella loihica PV-4 Shew_0630 hypothetical protein (RefSeq) insig. 35 47
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03595 lipid A export permease/ATP-binding protein MsbA no data 42 42
  Ralstonia solanacearum UW163 UW163_RS10075 lipid A export permease/ATP-binding protein MsbA no data 42 42
  Escherichia coli BL21 ECD_00401 putative multidrug ABC transporter ATPase insig. 41 51
  Escherichia coli ECOR27 NOLOHH_01205 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein cofit 41 51
  Escherichia coli ECRC100 OKFHMN_08270 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein cofit 41 51
  Escherichia coli ECRC101 MCAODC_27495 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein insig. 41 51
  Escherichia coli ECRC102 NIAGMN_06325 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein cofit 41 51
  Escherichia coli ECRC62 BNILDI_22620 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein cofit 41 51
  Escherichia coli ECRC98 JDDGAC_11925 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein insig. 41 51
  Escherichia coli ECRC99 KEDOAH_19695 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein no data 41 51
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03224 Multidrug resistance-like ATP-binding protein MdlB insig. 41 51
  Escherichia coli Nissle 1917 ECOLIN_RS02690 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein insig. 41 51
  Escherichia coli BW25113 b0449 mdlB fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components (NCBI) strong 41 51
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3896 Lipid A export ATP-binding/permease protein MsbA insig. 44 38
  Ralstonia solanacearum PSI07 RPSI07_RS13635 lipid A export permease/ATP-binding protein MsbA no data 41 43
  Variovorax sp. SCN45 GFF5865 Probable iron export permease protein FetB insig. 37 56
  Rhizobium sp. OAE497 ABIE40_RS00590 ABC transporter ATP-binding protein no data 32 48
  Rhodospirillum rubrum S1H Rru_A0863 ABC transporter, transmembrane region (NCBI) cofit 42 44
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17735 antibiotic ABC transporter ATP-binding protein cofit 33 44
  Rhodospirillum rubrum S1H Rru_A1120 ABC transporter, transmembrane region (NCBI) sig. 45 40
  Escherichia fergusonii Becca EFB2_03608 Multidrug resistance-like ATP-binding protein MdlB insig. 41 51
  Mycobacterium tuberculosis H37Rv Rv0194 Probable transmembrane multidrug efflux pump insig. 38 43
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17385 ABC transporter ATP-binding protein insig. 37 46