Homologs of RR42_RS28290 from Cupriavidus basilensis FW507-4G11

DNA-binding protein
SEED: Transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Cupriavidus basilensis FW507-4G11 RR42_RS28290 DNA-binding protein strong 100 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS22690 XRE family transcriptional regulator insig. 83 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS19390 XRE family transcriptional regulator sig. 67 96
o Ralstonia solanacearum GMI1000 RS_RS21755 XRE family transcriptional regulator sig. 66 90
o Paraburkholderia sabiae LMG 24235 QEN71_RS16530 XRE family transcriptional regulator insig. 48 91
o Burkholderia phytofirmans PsJN BPHYT_RS34660 DNA-binding protein sig. 47 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03588 transcriptional regulator, XRE family with cupin sensor sig. 47 90
o Paraburkholderia graminis OAS925 ABIE53_004670 transcriptional regulator with XRE-family HTH domain sig. 47 90
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2607 transcriptional regulator, XRE family with cupin sensor sig. 46 93
o Bosea sp. OAE506 ABIE41_RS13175 XRE family transcriptional regulator insig. 38 93
o Xanthobacter sp. DMC5 GFF1030 HTH-type transcriptional regulator SutR insig. 36 89
  Rhodospirillum rubrum S1H Rru_A2614 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) insig. 35 93
o Phaeobacter inhibens DSM 17395 PGA1_c34340 putative HTH-type transcriptional regulator sig. 36 90
o Klebsiella michiganensis M5al BWI76_RS13955 hypothetical protein insig. 36 90
o Pseudomonas aeruginosa PA14 IKLFDK_11340 hydroxyacid dehydrogenase no data 35 93
o Rhodopseudomonas palustris CGA009 TX73_013495 XRE family transcriptional regulator insig. 32 93
o Pseudomonas fluorescens SBW25 PFLU_RS18295 helix-turn-helix domain-containing protein insig. 35 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18295 helix-turn-helix domain-containing protein sig. 35 91
o Klebsiella pneumoniae MKP103 KDGMDA_05560 XRE family transcriptional regulator insig. 34 85
o Pseudomonas fluorescens FW300-N2C3 AO356_27170 XRE family transcriptional regulator strong 33 84
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4417 Transcriptional regulator insig. 34 91
  Pseudomonas fluorescens FW300-N2C3 AO356_23675 hydroxyacid dehydrogenase insig. 34 95
o Enterobacter asburiae PDN3 EX28DRAFT_3141 transcriptional regulator, XRE family with cupin sensor insig. 35 86
o Rahnella sp. WP5 EX31_RS05710 helix-turn-helix transcriptional regulator insig. 33 84
o Escherichia fergusonii Becca EFB2_02548 HTH-type transcriptional regulator SutR insig. 33 91
  Klebsiella michiganensis M5al BWI76_RS13370 hypothetical protein insig. 33 91
o Escherichia coli Nissle 1917 ECOLIN_RS08275 DNA-binding transcriptional regulator SutR no data 33 91
o Pseudomonas sp. DMC3 GFF1048 HTH-type transcriptional regulator SutR no data 35 91
o Escherichia coli ECOR38 HEPCGN_26215 sutR DNA-binding transcriptional regulator SutR insig. 33 91
o Escherichia coli ECRC100 OKFHMN_01605 sutR DNA-binding transcriptional regulator SutR insig. 33 91
o Escherichia coli ECRC101 MCAODC_16335 sutR DNA-binding transcriptional regulator SutR insig. 33 91
o Escherichia coli ECRC102 NIAGMN_25740 sutR DNA-binding transcriptional regulator SutR no data 33 91
o Escherichia coli ECRC98 JDDGAC_04095 sutR DNA-binding transcriptional regulator SutR insig. 33 91
o Escherichia coli ECRC99 KEDOAH_26835 sutR DNA-binding transcriptional regulator SutR no data 33 91
o Enterobacter sp. TBS_079 MPMX20_03983 hypothetical protein insig. 34 86
  Klebsiella pneumoniae MKP103 KDGMDA_23150 XRE family transcriptional regulator insig. 31 91
o Escherichia coli BL21 ECD_01392 putative DNA-binding transcriptional regulator no data 32 91
o Escherichia coli ECOR27 NOLOHH_19280 sutR DNA-binding transcriptional regulator SutR insig. 32 91
o Escherichia coli ECRC62 BNILDI_17730 sutR DNA-binding transcriptional regulator SutR insig. 32 91
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02281 HTH-type transcriptional regulator SutR insig. 32 91
o Escherichia coli BW25113 b1434 ydcN predicted DNA-binding transcriptional regulator (NCBI) insig. 32 91
o Methanococcus maripaludis S2 MMP_RS01155 XRE family transcriptional regulator strong 31 91
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05870 helix-turn-helix domain-containing protein cofit 30 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2595 Transcriptional regulator yidN, Cro/CI family insig. 33 84
o Shewanella sp. ANA-3 Shewana3_0319 XRE family transcriptional regulator (RefSeq) strong 33 84
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02314 hypothetical protein cofit 31 84
o Erwinia amylovora T8 OLJFJH_15285 XRE family transcriptional regulator insig. 28 89
  Enterobacter asburiae PDN3 EX28DRAFT_1223 Cupin domain/Helix-turn-helix insig. 31 84
o Pantoea sp. MT58 IAI47_10265 helix-turn-helix domain-containing protein insig. 30 90
  Ralstonia solanacearum GMI1000 RS_RS23520 XRE family transcriptional regulator no data 33 85
  Ralstonia solanacearum GMI1000 RS_RS23650 XRE family transcriptional regulator no data 33 85
  Methanococcus maripaludis S2 MMP_RS00545 XRE family transcriptional regulator insig. 29 84
o Methanococcus maripaludis JJ MMJJ_RS04940 XRE family transcriptional regulator insig. 29 84
  Alteromonas macleodii MIT1002 MIT1002_00748 DNA-binding transcriptional repressor PuuR insig. 36 68
o Pseudomonas fluorescens FW300-N2E3 AO353_24090 DNA-binding protein insig. 31 87
  Paraburkholderia graminis OAS925 ABIE53_003474 transcriptional regulator with XRE-family HTH domain insig. 32 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2660 Putative transcriptional regulator insig. 31 84
  Pseudomonas fluorescens SBW25 PFLU_RS15610 helix-turn-helix transcriptional regulator strong 32 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15610 helix-turn-helix transcriptional regulator strong 32 87
o Acinetobacter baumannii LAC-4 RR41_RS01095 XRE family transcriptional regulator insig. 35 91
  Enterobacter sp. TBS_079 MPMX20_02243 HTH-type transcriptional regulator SutR insig. 31 82
o Acinetobacter radioresistens SK82 MPMX26_01241 HTH-type transcriptional regulator SutR strong 34 82
o Pectobacterium carotovorum WPP14 HER17_RS21700 XRE family transcriptional regulator cofit 29 91
  Rhizobium sp. OAE497 ABIE40_RS01060 XRE family transcriptional regulator insig. 30 90
o Serratia liquefaciens MT49 IAI46_12755 helix-turn-helix transcriptional regulator no data 32 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04234 transcriptional regulator, XRE family with cupin sensor insig. 32 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS18270 XRE family transcriptional regulator insig. 29 90
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07555 helix-turn-helix domain-containing protein cofit 32 80
  Burkholderia phytofirmans PsJN BPHYT_RS16515 2-hydroxyacid dehydrogenase insig. 31 92
o Sinorhizobium meliloti 1021 SMa1076 hypothetical protein insig. 31 90
  Serratia liquefaciens MT49 IAI46_11440 helix-turn-helix transcriptional regulator insig. 28 89
  Bosea sp. OAE506 ABIE41_RS03270 XRE family transcriptional regulator insig. 32 92
  Rahnella sp. WP5 EX31_RS03010 helix-turn-helix domain-containing protein sig. 34 78
  Paraburkholderia sabiae LMG 24235 QEN71_RS02215 XRE family transcriptional regulator insig. 31 98
  Pantoea sp. MT58 IAI47_18980 helix-turn-helix domain-containing protein sig. 30 80
  Rahnella sp. WP5 EX31_RS21645 XRE family transcriptional regulator insig. 31 90
o Azospirillum brasilense Sp245 AZOBR_RS20500 transcriptional regulator insig. 28 91
  Enterobacter asburiae PDN3 EX28DRAFT_4383 transcriptional regulator, XRE family with cupin sensor strong 35 84
  Enterobacter sp. TBS_079 MPMX20_04570 HTH-type transcriptional regulator SutR strong 34 91
  Pectobacterium carotovorum WPP14 HER17_RS03720 XRE family transcriptional regulator insig. 30 87
o Dickeya dianthicola 67-19 HGI48_RS18970 helix-turn-helix transcriptional regulator cofit 30 82
  Variovorax sp. SCN45 GFF1021 Transcriptional regulator, Xre-family with cupin domain insig. 33 90
o Dickeya dianthicola ME23 DZA65_RS20080 helix-turn-helix transcriptional regulator insig. 30 82
  Phaeobacter inhibens DSM 17395 PGA1_c29470 puttative helix-turn-helix protein insig. 30 82
o Azospirillum sp. SherDot2 MPMX19_02874 HTH-type transcriptional regulator SutR insig. 32 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_09830 XRE family transcriptional regulator insig. 30 82
  Pseudomonas aeruginosa PA14 IKLFDK_28600 Cro/Cl family transcriptional regulator insig. 27 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3219 Transcriptional regulator, Cro/CI family insig. 26 91
  Ralstonia solanacearum PSI07 RPSI07_RS09440 helix-turn-helix domain-containing protein insig. 30 90
  Pseudomonas sp. RS175 PFR28_02400 hypothetical protein sig. 28 85
  Pseudomonas sp. SVBP6 COO64_RS21060 helix-turn-helix domain-containing protein insig. 25 97
  Fusobacterium nucleatum SB010 HUW76_01135 cupin domain-containing protein strong 29 90
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_541 Transcriptional regulator, Cro/CI family insig. 28 85
  Pseudomonas fluorescens FW300-N2C3 AO356_23290 Cro/Cl family transcriptional regulator sig. 28 87
  Pseudomonas sp. BP01 JOY50_RS05765 helix-turn-helix domain-containing protein no data 25 98
  Klebsiella michiganensis M5al BWI76_RS00575 DNA-binding protein strong 33 76
  Alteromonas macleodii MIT1002 MIT1002_03074 HTH-type transcriptional regulator PuuR insig. 27 89
  Pseudomonas putida KT2440 PP_2868 Transcriptional regulator, Cro/CI family strong 26 97
  Ralstonia solanacearum GMI1000 RS_RS15735 XRE family transcriptional regulator insig. 29 90
  Pseudomonas aeruginosa PA14 IKLFDK_09190 transcriptional regulator no data 29 90