| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas syringae pv. syringae B728a | Psyr_1190 | | type III transcriptional regulator HrpR | strong | 100 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1190 | | type III transcriptional regulator HrpR | cofit | 100 | 100 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1191 | | type III transcriptional regulator HrpS | strong | 63 | 89 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1191 | | type III transcriptional regulator HrpS | cofit | 63 | 89 |
| o | Pseudomonas simiae WCS417 | PS417_03555 | | ATPase AAA | insig. | 57 | 97 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00917 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 60 | 89 |
| | Pectobacterium carotovorum WPP14 | HER17_RS10035 | | sigma 54-interacting transcriptional regulator | insig. | 56 | 88 |
| o | Dickeya dianthicola 67-19 | HGI48_RS11700 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 56 | 88 |
| o | Dickeya dianthicola ME23 | DZA65_RS12185 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 56 | 88 |
| o | Dickeya dadantii 3937 | DDA3937_RS11640 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 56 | 88 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS03605 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 57 | 90 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS03605 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 57 | 90 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4553 | | Nitrogen regulation protein NtrC | sig. | 57 | 87 |
| o | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_05650 | | AAA family ATPase | strong | 55 | 90 |
| o | Erwinia tracheiphila SCR3 | LU632_RS03200 | | sigma-54 dependent transcriptional regulator | strong | 55 | 90 |
| o | Erwinia amylovora T8 | OLJFJH_08150 | | AAA family ATPase | strong | 56 | 88 |
| | Pseudomonas sp. DMC3 | GFF5041 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 46 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_04251 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 49 | 87 |
| | Pseudomonas putida KT2440 | PP_1066 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 45 | 90 |
| | Pseudomonas sp. BP01 | JOY50_RS14825 | | sigma-54 dependent transcriptional regulator | insig. | 45 | 90 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_09635 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 49 | 85 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_776 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | insig. | 45 | 90 |
| | Pseudomonas sp. DMC3 | GFF5115 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 45 | 90 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4775 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | strong | 45 | 90 |
| | Pseudomonas sp. SVBP6 | COO64_RS16760 | | sigma-54 dependent transcriptional regulator | insig. | 45 | 90 |
| | Pseudomonas simiae WCS417 | PS417_05535 | | Fis family transcriptional regulator | strong | 44 | 90 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS16305 | | sigma-54 dependent transcriptional regulator | insig. | 47 | 87 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16265 | | Fis family transcriptional regulator | strong | 44 | 90 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5565 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | insig. | 45 | 90 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_18205 | | Fis family transcriptional regulator | insig. | 45 | 90 |
| | Pseudomonas stutzeri RCH2 | Psest_4132 | | alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) | strong | 48 | 87 |
| | Pseudomonas sp. SVBP6 | COO64_RS26185 | | sigma-54 dependent transcriptional regulator | insig. | 46 | 93 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01294 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 44 | 90 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS00045 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 47 | 87 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01705 | | Fis family transcriptional regulator | insig. | 46 | 89 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1806 | | Nitrogen regulation protein NR(I) | strong | 45 | 97 |
| | Pseudomonas sp. S08-1 | OH686_13325 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | cofit | 45 | 90 |
| | Dechlorosoma suillum PS | Dsui_3486 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 47 | 87 |
| | Ralstonia solanacearum GMI1000 | RS_RS17240 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 47 | 87 |
| | Pseudomonas sp. RS175 | PFR28_03376 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | sig. | 45 | 90 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05620 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 44 | 90 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05620 | | sigma-54-dependent Fis family transcriptional regulator | strong | 44 | 90 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS23225 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 47 | 87 |
| | Ralstonia solanacearum UW163 | UW163_RS16475 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 47 | 87 |
| | Shewanella loihica PV-4 | Shew_1442 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | strong | 45 | 90 |
| | Pseudomonas simiae WCS417 | PS417_22645 | | C4-dicarboxylate ABC transporter | sig. | 48 | 92 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37765 | | sigma-54 dependent transcriptional regulator | insig. | 45 | 87 |
| | Pseudomonas segetis P6 | MPMX49_00215 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 50 | 87 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_06350 | | Fis family transcriptional regulator | insig. | 44 | 92 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_17800 | | C4-dicarboxylate ABC transporter | strong | 46 | 91 |
| | Shewanella sp. ANA-3 | Shewana3_1412 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | cofit | 48 | 85 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04682 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 48 | 89 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS24280 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 48 | 92 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS24280 | | sigma-54-dependent Fis family transcriptional regulator | strong | 48 | 92 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5487 | | Nitrogen regulation protein NR(I) | strong | 46 | 91 |
| | Shewanella oneidensis MR-1 | SO3138 | dctD | C4-dicarboxylate transport transcriptional regulatory protein (NCBI ptt file) | insig. | 48 | 85 |
| | Ralstonia solanacearum GMI1000 | RS_RS01635 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 44 | 92 |
| | Shewanella amazonensis SB2B | Sama_2213 | | response regulator receiver protein (RefSeq) | strong | 47 | 85 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21130 | | Fis family transcriptional regulator | insig. | 47 | 87 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_03805 | | C4-dicarboxylate ABC transporter | strong | 45 | 97 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS06635 | | sigma-54 dependent transcriptional regulator | strong | 43 | 92 |
| | Dechlorosoma suillum PS | Dsui_3467 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 46 | 88 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS14005 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 45 | 91 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0619 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 49 | 87 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS22520 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 44 | 92 |
| | Azospirillum sp. SherDot2 | MPMX19_03597 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 46 | 87 |
| | Pseudomonas putida KT2440 | PP_1401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 45 | 92 |
| | Azospirillum sp. SherDot2 | MPMX19_05978 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 48 | 86 |
| | Paraburkholderia graminis OAS925 | ABIE53_000648 | | two-component system C4-dicarboxylate transport response regulator DctD | insig. | 43 | 93 |
| | Pseudomonas sp. RS175 | PFR28_03462 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 46 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS02520 | | Fis family transcriptional regulator | strong | 43 | 92 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10795 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 43 | 92 |
| | Ralstonia solanacearum UW163 | UW163_RS02785 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 43 | 92 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS08380 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 47 | 87 |
| | Rhodospirillum rubrum S1H | Rru_A1435 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | strong | 45 | 87 |
| | Pseudomonas sp. BP01 | JOY50_RS14530 | | sigma-54 dependent transcriptional regulator | insig. | 45 | 92 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS16810 | | Fis family transcriptional regulator | strong | 44 | 87 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02037 | | two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family | cofit | 43 | 93 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_685 | | Nitrogen regulation protein NR(I) | no data | 45 | 97 |
| | Pseudomonas sp. SVBP6 | COO64_RS00595 | | sigma-54 dependent transcriptional regulator | insig. | 46 | 87 |
| | Xanthobacter sp. DMC5 | GFF2901 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 47 | 87 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3995 | | Helix-turn-helix, Fis-type | sig. | 44 | 92 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3995 | | Helix-turn-helix, Fis-type | insig. | 44 | 92 |
| | Paraburkholderia graminis OAS925 | ABIE53_001852 | | two-component system C4-dicarboxylate transport response regulator DctD | strong | 44 | 87 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3913 | | Helix-turn-helix, Fis-type | insig. | 43 | 89 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3913 | | Helix-turn-helix, Fis-type | insig. | 43 | 89 |
| | Rhizobium sp. OAE497 | ABIE40_RS15425 | | sigma-54 dependent transcriptional regulator | strong | 46 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS26060 | | Fis family transcriptional regulator | insig. | 45 | 87 |
| | Escherichia fergusonii Becca | EFB2_04538 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 43 | 91 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23460 | | sigma-54 dependent transcriptional regulator | cofit | 43 | 91 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27655 | | two-component system response regulator DctD | insig. | 45 | 91 |
| | Sinorhizobium meliloti 1021 | SM_b21200 | | two-component response regulator protein | insig. | 46 | 87 |
| | Pseudomonas sp. DMC3 | GFF4159 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 45 | 86 |
| | Variovorax sp. OAS795 | ABID97_RS26605 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 90 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS01375 | | sigma-54 dependent transcriptional regulator | strong | 42 | 92 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_10065 | | Fis family transcriptional regulator | strong | 46 | 86 |
| | Pseudomonas segetis P6 | MPMX49_04378 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | sig. | 44 | 88 |
| | Pseudomonas stutzeri RCH2 | Psest_4267 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 46 | 86 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS01400 | | sigma-54-dependent Fis family transcriptional regulator | strong | 45 | 86 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS01400 | | sigma-54-dependent Fis family transcriptional regulator | strong | 45 | 86 |