Homologs of Pf6N2E2_2957 from Pseudomonas fluorescens FW300-N2E2

ATP-dependent DNA ligase (EC 6.5.1.1) LigC
SEED: ATP-dependent DNA ligase (EC 6.5.1.1) LigC
KEGG: DNA ligase (ATP)

89 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2957 ATP-dependent DNA ligase (EC 6.5.1.1) LigC insig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_05490 ATP-dependent DNA ligase insig. 95 100
o Pseudomonas sp. RS175 PFR28_00508 DNA ligase insig. 90 100
o Pseudomonas sp. DMC3 GFF2148 DNA ligase insig. 84 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3180 ATP-dependent DNA ligase (EC 6.5.1.1) LigC insig. 82 100
o Pseudomonas syringae pv. syringae B728a Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase insig. 80 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase insig. 80 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01454 DNA ligase cofit 79 100
o Pseudomonas fluorescens SBW25 PFLU_RS06485 ATP-dependent DNA ligase insig. 79 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06485 ATP-dependent DNA ligase insig. 79 100
o Pseudomonas sp. S08-1 OH686_06060 DNA ligase, ATP-dependent, family insig. 76 100
o Pseudomonas simiae WCS417 PS417_06420 ATP-dependent DNA ligase insig. 78 100
o Pseudomonas sp. BP01 JOY50_RS24060 ATP-dependent DNA ligase insig. 77 100
o Pseudomonas putida KT2440 PP_1105 putative DNA ligase, ATP-dependent insig. 76 100
o Pseudomonas stutzeri RCH2 Psest_1648 ATP-dependent DNA ligase insig. 74 100
o Variovorax sp. OAS795 ABID97_RS00390 ATP-dependent DNA ligase insig. 67 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS21355 ATP-dependent DNA ligase insig. 66 100
o Variovorax sp. SCN45 GFF3697 ATP-dependent DNA ligase (EC 6.5.1.1) LigC insig. 66 100
o Herbaspirillum seropedicae SmR1 HSERO_RS11395 ATP-dependent DNA ligase insig. 58 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02819 DNA ligase-1 insig. 58 100
o Acidovorax sp. GW101-3H11 Ac3H11_4922 ATP-dependent DNA ligase (EC 6.5.1.1) LigC sig. 57 100
o Burkholderia phytofirmans PsJN BPHYT_RS26300 ATP-dependent DNA ligase insig. 58 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS20340 ATP-dependent DNA ligase insig. 58 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1241 ATP-dependent DNA ligase (EC 6.5.1.1) LigC insig. 53 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21575 ATP-dependent DNA ligase insig. 48 100
o Cellulophaga baltica 18 M666_RS06765 ATP-dependent DNA ligase insig. 47 100
o Dinoroseobacter shibae DFL-12 Dshi_2589 ATP dependent DNA ligase (RefSeq) strong 49 100
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09095 ATP-dependent DNA ligase insig. 42 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3656.1 ATP-dependent DNA ligase (EC 6.5.1.1) LigC insig. 47 100
o Lysobacter sp. OAE881 ABIE51_RS03755 ATP-dependent DNA ligase insig. 47 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3851 DNA ligase, ATP-dependent, PP_1105 family insig. 38 99
o Phaeobacter inhibens DSM 17395 PGA1_262p00500 putative ATP dependent DNA ligase insig. 37 100
o Sphingobium sp. HT1-2 GFF105 ATP-dependent DNA ligase (EC 6.5.1.1) LigC cofit 37 100
o Azospirillum brasilense Sp245 AZOBR_RS09960 ATP-dependent DNA ligase insig. 37 100
o Caulobacter crescentus NA1000 CCNA_03725 ATP-dependent DNA ligase cofit 39 100
o Caulobacter crescentus NA1000 Δfur CCNA_03725 ATP-dependent DNA ligase cofit 39 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04120 cisplatin damage response ATP-dependent DNA ligase insig. 37 100
  Paraburkholderia graminis OAS925 ABIE53_005972 ATP-dependent DNA ligase sig. 66 40
o Agrobacterium fabrum C58 Atu0840 ATP-dependent DNA ligase sig. 37 99
o Rhizobium sp. OAE497 ABIE40_RS04635 cisplatin damage response ATP-dependent DNA ligase insig. 37 99
o Azospirillum sp. SherDot2 MPMX19_02215 DNA ligase insig. 37 100
o Xanthobacter sp. DMC5 GFF150 DNA ligase insig. 37 100
  Sinorhizobium meliloti 1021 SMc03177 ATP-dependent DNA ligase insig. 37 100
  Rhodopseudomonas palustris CGA009 TX73_004135 ATP-dependent DNA ligase insig. 36 100
  Bosea sp. OAE506 ABIE41_RS24090 cisplatin damage response ATP-dependent DNA ligase insig. 37 100
  Alteromonas macleodii MIT1002 MIT1002_03768 Putative DNA ligase-like protein/MT0965 insig. 32 100
  Paraburkholderia graminis OAS925 ABIE53_005971 ATP-dependent DNA ligase no data 54 24
  Paraburkholderia graminis OAS925 ABIE53_005970 hypothetical protein insig. 54 27
  Methanococcus maripaludis JJ MMJJ_RS00110 ATP-dependent DNA ligase no data 25 89
  Methanococcus maripaludis S2 MMP_RS05025 ATP-dependent DNA ligase no data 25 89
  Mycobacterium tuberculosis H37Rv Rv3062 Probable ATP-dependent DNA ligase LigB (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase) insig. 30 57
  Bosea sp. OAE506 ABIE41_RS06590 non-homologous end-joining DNA ligase insig. 31 35
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3858 DNA ligase D insig. 25 50
  Agrobacterium fabrum C58 Atu5051 ATP-dependent DNA ligase insig. 30 38
  Paraburkholderia graminis OAS925 ABIE53_000212 bifunctional non-homologous end joining protein LigD insig. 30 35
  Mycobacterium tuberculosis H37Rv Rv3731 Possible ATP-dependent DNA ligase LigC (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase) insig. 31 32
  Agrobacterium fabrum C58 Atu6090 ATP-dependent DNA ligase insig. 28 56
  Sphingobium sp. HT1-2 GFF5134 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD cofit 30 36
  Sinorhizobium meliloti 1021 SMa0414 hypothetical protein insig. 30 36
  Agrobacterium fabrum C58 Atu5097 ATP-dependent DNA ligase insig. 26 53
  Pseudomonas aeruginosa PUPa3 NPBIFN_03016 ligD DNA ligase D insig. 29 55
  Pseudomonas aeruginosa PA14 IKLFDK_10445 DNA ligase D strong 28 55
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03237 Multifunctional non-homologous end joining protein LigD cofit 29 53
  Pseudomonas fluorescens SBW25 PFLU_RS14185 DNA ligase D insig. 29 53
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14185 DNA ligase D insig. 29 53
  Pseudomonas aeruginosa MRSN321 PFGADD_02981 ligD DNA ligase D insig. 28 55
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06915 DNA ligase D insig. 24 49
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02935 DNA ligase D insig. 28 36
  Mycobacterium tuberculosis H37Rv Rv0938 ATP dependent DNA ligase LigD (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (sealase) (DNA repair enzyme) (DNA joinase) insig. 31 33
  Sinorhizobium meliloti 1021 SMa0424 ATP-dependent DNA ligase insig. 27 35
  Sinorhizobium meliloti 1021 SM_b21044 ATP-dependent DNA ligase insig. 25 52
  Sinorhizobium meliloti 1021 SMc03959 hypothetical protein insig. 28 38
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.140.1 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 30 35
  Rhizobium sp. OAE497 ABIE40_RS29525 DNA ligase D insig. 30 38
  Agrobacterium fabrum C58 Atu5055 ATP-dependent DNA ligase insig. 27 38
  Sinorhizobium meliloti 1021 SM_b20912 ATP-dependent DNA ligase insig. 31 37
  Rhizobium sp. OAE497 ABIE40_RS28460 DNA ligase D insig. 27 42
  Paraburkholderia sabiae LMG 24235 QEN71_RS43605 DNA ligase insig. 26 38
  Rhizobium sp. OAE497 ABIE40_RS28530 ATP-dependent DNA ligase insig. 28 28
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06196 ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module insig. 27 40
  Cupriavidus basilensis FW507-4G11 RR42_RS37085 ATP-dependent DNA ligase insig. 26 35
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2247.1 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 26 35
  Sinorhizobium meliloti 1021 SM_b20008 ATP-dependent DNA ligase insig. 28 38
  Bosea sp. OAE506 ABIE41_RS06605 DNA ligase D insig. 28 39
  Rhizobium sp. OAE497 ABIE40_RS27965 non-homologous end-joining DNA ligase insig. 28 36
  Lysobacter sp. OAE881 ABIE51_RS12760 DNA ligase D insig. 27 39
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01036 DNA ligase D, ligase domain-containing protein no data 26 40
  Sinorhizobium meliloti 1021 SM_b20685 hypothetical protein insig. 27 35
  Pseudomonas orientalis W4I3 QF045_RS16850 DNA ligase D insig. 26 53