Homologs of Pf1N1B4_5950 from Pseudomonas fluorescens FW300-N1B4

Transcriptional activator RfaH
SEED: Transcriptional activator RfaH
KEGG: transcriptional antiterminator RfaH

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5950 Transcriptional activator RfaH no data 100 100
o Pseudomonas syringae pv. syringae B728a Psyr_3226 Transcriptional activator RfaH insig. 46 93
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3226 Transcriptional activator RfaH insig. 46 93
o Pseudomonas stutzeri RCH2 Psest_2605 transcriptional activator RfaH sig. 49 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5081 Transcriptional activator RfaH no data 47 93
o Kangiella aquimarina DSM 16071 B158DRAFT_2343 transcriptional activator RfaH strong 43 90
o Herbaspirillum seropedicae SmR1 HSERO_RS02425 transcriptional activator strong 38 93
o Klebsiella michiganensis M5al BWI76_RS01340 transcription/translation regulatory transformer protein RfaH no data 41 87
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF267 Transcriptional activator RfaH strong 39 95
o Escherichia coli BL21 ECD_03733 transcription antitermination protein strong 39 87
o Escherichia coli ECOR27 NOLOHH_06395 rfaH transcription/translation regulatory transformer protein RfaH strong 39 87
o Escherichia coli ECOR38 HEPCGN_12895 rfaH transcription/translation regulatory transformer protein RfaH strong 39 87
o Escherichia coli ECRC101 OKFHMN_14265 rfaH transcription/translation regulatory transformer protein RfaH insig. 39 87
o Escherichia coli ECRC101 MCAODC_04770 rfaH transcription/translation regulatory transformer protein RfaH sig. 39 87
o Escherichia coli ECRC102 NIAGMN_12020 rfaH transcription/translation regulatory transformer protein RfaH strong 39 87
o Escherichia coli ECRC62 BNILDI_05135 rfaH transcription/translation regulatory transformer protein RfaH strong 39 87
o Escherichia coli ECRC98 JDDGAC_17890 rfaH transcription/translation regulatory transformer protein RfaH no data 39 87
o Escherichia coli ECRC99 KEDOAH_13885 rfaH transcription/translation regulatory transformer protein RfaH no data 39 87
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04211 Transcription antitermination protein RfaH cofit 39 87
o Escherichia coli BW25113 b3842 rfaH transcriptional activator RfaH (NCBI) strong 39 87
o Escherichia fergusonii Becca EFB2_04775 Transcription antitermination protein RfaH strong 39 87
o Escherichia coli Nissle 1917 ECOLIN_RS22150 transcription/translation regulatory transformer protein RfaH strong 39 87
o Dickeya dianthicola 67-19 HGI48_RS00935 transcription/translation regulatory transformer protein RfaH strong 41 87
o Dickeya dianthicola ME23 DZA65_RS00995 transcription/translation regulatory transformer protein RfaH cofit 41 87
o Pectobacterium carotovorum WPP14 HER17_RS20570 transcription/translation regulatory transformer protein RfaH strong 41 87
o Dickeya dadantii 3937 DDA3937_RS20290 transcription/translation regulatory transformer protein RfaH strong 41 87
  Marinobacter adhaerens HP15 HP15_2404 transcriptional activator RfaH strong 41 74
o Pantoea sp. MT58 IAI47_18250 transcription/translation regulatory transformer protein RfaH strong 41 87
o Shewanella amazonensis SB2B Sama_2265 transcriptional activator rfaH, putative (RefSeq) strong 37 95
o Enterobacter asburiae PDN3 EX28DRAFT_4505 transcription elongation factor/antiterminator RfaH cofit 39 87
o Enterobacter sp. TBS_079 MPMX20_04440 Transcription antitermination protein RfaH strong 39 87
  Marinobacter adhaerens HP15 HP15_p187g93 transcriptional activator RfaH insig. 37 83
o Serratia liquefaciens MT49 IAI46_01105 transcription/translation regulatory transformer protein RfaH insig. 37 87
o Vibrio cholerae E7946 ATCC 55056 CSW01_05050 transcription/translation regulatory transformer protein RfaH insig. 34 90
o Erwinia tracheiphila SCR3 LU632_RS23970 rfaH transcription/translation regulatory transformer protein RfaH strong 39 87
o Rahnella sp. WP5 EX31_RS14590 transcription/translation regulatory transformer protein RfaH insig. 37 92
o Shewanella oneidensis MR-1 SO3194 transcriptional activator rfaH, putative (NCBI ptt file) strong 35 95
o Shewanella sp. ANA-3 Shewana3_1374 transcription antitermination protein nusG (RefSeq) strong 35 93
o Shewanella loihica PV-4 Shew_1398 NusG antitermination factor (RefSeq) strong 29 95
o Magnetospirillum magneticum AMB-1 AMB_RS00245 transcriptional activator RfaH insig. 28 93
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07905 antitermination protein NusG insig. 25 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3992 hypothetical protein no data 70 27
  Castellaniella sp019104865 MT123 ABCV34_RS12845 transcription termination/antitermination NusG family protein insig. 29 90
  Enterobacter asburiae PDN3 EX28DRAFT_4520 transcription antitermination protein nusG no data 30 98
  Klebsiella michiganensis M5al BWI76_RS01470 transcription termination/antitermination protein NusG no data 30 98
  Pectobacterium carotovorum WPP14 HER17_RS20455 transcription termination/antitermination protein NusG no data 30 98
  Enterobacter sp. TBS_079 MPMX20_00202 Transcription termination/antitermination protein NusG no data 30 98
  Serratia liquefaciens MT49 IAI46_01235 transcription termination/antitermination protein NusG no data 30 98
  Escherichia coli BL21 ECD_03858 transcription termination factor no data 29 98
  Escherichia fergusonii Becca EFB2_04629 Transcription termination/antitermination protein NusG no data 29 98
  Escherichia coli ECOR27 NOLOHH_05595 nusG transcription termination/antitermination protein NusG no data 29 98
  Escherichia coli ECOR38 HEPCGN_12100 nusG transcription termination/antitermination protein NusG no data 29 98
  Escherichia coli ECRC101 OKFHMN_13450 nusG transcription termination/antitermination protein NusG no data 29 98
  Escherichia coli ECRC101 MCAODC_03950 nusG transcription termination/antitermination protein NusG no data 29 98
  Escherichia coli ECRC102 NIAGMN_11200 nusG transcription termination/antitermination protein NusG no data 29 98
  Escherichia coli ECRC62 BNILDI_05930 nusG transcription termination/antitermination protein NusG no data 29 98
  Escherichia coli ECRC98 JDDGAC_17075 nusG transcription termination/antitermination protein NusG no data 29 98
  Escherichia coli ECRC99 KEDOAH_14710 nusG transcription termination/antitermination protein NusG no data 29 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04069 Transcription termination/antitermination protein NusG no data 29 98
  Escherichia coli Nissle 1917 ECOLIN_RS22980 transcription termination/antitermination protein NusG no data 29 98
  Escherichia coli BW25113 b3982 nusG transcription antitermination protein NusG (NCBI) no data 29 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4216 Transcription antitermination protein NusG no data 29 98
  Pantoea sp. MT58 IAI47_18135 transcription termination/antitermination protein NusG no data 29 98
  Dickeya dianthicola 67-19 HGI48_RS01065 transcription termination/antitermination protein NusG no data 29 98
  Dickeya dianthicola ME23 DZA65_RS01130 transcription termination/antitermination protein NusG no data 29 98
  Dickeya dadantii 3937 DDA3937_RS01075 transcription termination/antitermination protein NusG no data 29 98
  Vibrio cholerae E7946 ATCC 55056 CSW01_01675 transcription termination/antitermination protein NusG no data 28 98
  Shewanella loihica PV-4 Shew_0146 NusG antitermination factor (RefSeq) no data 29 94
  Erwinia tracheiphila SCR3 LU632_RS00905 nusG transcription termination/antitermination protein NusG no data 28 98
  Alteromonas macleodii MIT1002 MIT1002_03740 hypothetical protein no data 27 96
  Shewanella amazonensis SB2B Sama_0201 transcription antitermination protein NusG (RefSeq) no data 28 97
  Rahnella sp. WP5 EX31_RS16755 transcription termination/antitermination protein NusG no data 28 98
  Azospirillum sp. SherDot2 MPMX19_00380 Transcription termination/antitermination protein NusG no data 30 73
  Shewanella oneidensis MR-1 SO0219 nusG transcription antitermination protein NusG (NCBI ptt file) no data 31 71
  Ralstonia sp. UNC404CL21Col ABZR87_RS02950 transcription termination/antitermination protein NusG no data 27 98
  Shewanella sp. ANA-3 Shewana3_0187 transcription antitermination protein nusG (RefSeq) no data 27 97
  Kangiella aquimarina DSM 16071 B158DRAFT_1864 transcription antitermination protein nusG no data 29 71
  Azospirillum brasilense Sp245 AZOBR_RS11535 transcription termination/antitermination factor NusG no data 29 73
  Magnetospirillum magneticum AMB-1 AMB_RS15840 transcription termination/antitermination protein NusG no data 25 96
  Ralstonia solanacearum PSI07 RPSI07_RS09955 transcription termination/antitermination protein NusG no data 26 95
  Castellaniella sp019104865 MT123 ABCV34_RS11675 transcription termination/antitermination protein NusG no data 26 95
  Pseudomonas sp. S08-1 OH686_15295 transcription termination/antitermination factor NusG no data 29 71
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07290 transcription termination/antitermination protein NusG no data 26 95
  Ralstonia solanacearum GMI1000 RS_RS15225 transcription termination/antitermination protein NusG no data 26 95
  Ralstonia solanacearum UW163 UW163_RS06330 transcription termination/antitermination protein NusG no data 26 95
  Desulfovibrio vulgaris Miyazaki F DvMF_1450 NusG antitermination factor (RefSeq) no data 23 95
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01815 antitermination protein NusG cofit 23 93
  Pseudomonas stutzeri RCH2 Psest_3619 transcription termination/antitermination factor NusG no data 28 71
  Pseudomonas fluorescens SBW25 PFLU_RS27225 transcription termination/antitermination protein NusG no data 27 72
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27225 transcription termination/antitermination protein NusG no data 27 72
  Pseudomonas simiae WCS417 PS417_25595 antitermination protein NusG no data 27 72
  Pseudomonas fluorescens FW300-N2E3 AO353_07060 antitermination protein NusG no data 27 72
  Pseudomonas fluorescens FW300-N2C3 AO356_14585 antitermination protein NusG no data 27 72
  Cupriavidus basilensis FW507-4G11 RR42_RS19345 transcription termination/antitermination factor NusG no data 25 99
  Dechlorosoma suillum PS Dsui_0371 transcription termination/antitermination factor NusG no data 33 51
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4846 Transcription antitermination protein NusG no data 27 72
  Caulobacter crescentus NA1000 CCNA_03310 transcription antitermination protein NusG no data 21 98
  Caulobacter crescentus NA1000 Δfur CCNA_03310 transcription antitermination protein NusG no data 21 98
  Pseudomonas sp. RS175 PFR28_04014 Transcription termination/antitermination protein NusG no data 27 72
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1242 Transcription antitermination protein NusG no data 27 72