Homologs of PP_3791 from Pseudomonas putida KT2440

Site-specific recombinase, phage integrase family
SEED: Phage integrase family protein

80 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_3791 Site-specific recombinase, phage integrase family insig. 100 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS38195 tyrosine-type recombinase/integrase insig. 90 100
o Pseudomonas stutzeri RCH2 Psest_3423 Site-specific recombinase XerC insig. 90 100
o Pseudomonas sp. BP01 JOY50_RS12925 tyrosine-type recombinase/integrase insig. 86 100
o Pseudomonas orientalis W4I3 QF045_RS20340 tyrosine-type recombinase/integrase insig. 84 100
o Lysobacter sp. OAE881 ABIE51_RS03485 tyrosine-type recombinase/integrase insig. 67 95
o Marinobacter adhaerens HP15 HP15_4164 phage integrase family protein insig. 62 95
o Klebsiella michiganensis M5al BWI76_RS13030 site-specific recombinase, phage integrase family protein insig. 61 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03410 tyrosine-type recombinase/integrase insig. 61 96
o Phaeobacter inhibens DSM 17395 PGA1_c19380 putative phage integrase insig. 55 98
o Escherichia coli Nissle 1917 ECOLIN_RS01460 site-specific integrase insig. 60 95
o Rhodopseudomonas palustris CGA009 TX73_006840 tyrosine-type recombinase/integrase insig. 60 99
o Alteromonas macleodii MIT1002 MIT1002_02605 site-specific tyrosine recombinase XerC insig. 57 96
  Alteromonas macleodii MIT1002 MIT1002_02610 site-specific tyrosine recombinase XerC insig. 57 96
o Dinoroseobacter shibae DFL-12 Dshi_2590 integrase family protein (RefSeq) insig. 56 94
o Bosea sp. OAE506 ABIE41_RS06940 tyrosine-type recombinase/integrase insig. 59 94
o Caulobacter crescentus NA1000 CCNA_01844 DNA integration/recombination/inversion protein sig. 56 96
o Caulobacter crescentus NA1000 Δfur CCNA_01844 DNA integration/recombination/inversion protein cofit 56 96
o Magnetospirillum magneticum AMB-1 AMB_RS18475 integrase insig. 55 97
o Sphingobium sp. HT1-2 GFF5357 Phage integrase insig. 55 97
  Sphingobium sp. HT1-2 GFF5340 Phage integrase cofit 55 94
o Shewanella loihica PV-4 Shew_0251 phage integrase family protein (RefSeq) insig. 47 95
  Sinorhizobium meliloti 1021 SMa1874 hypothetical protein insig. 65 54
  Alteromonas macleodii MIT1002 MIT1002_00614 site-specific tyrosine recombinase XerC no data 64 50
  Alteromonas macleodii MIT1002 MIT1002_02616 site-specific tyrosine recombinase XerC no data 64 50
  Paraburkholderia graminis OAS925 ABIE53_000988 hypothetical protein sig. 57 36
  Bosea sp. OAE506 ABIE41_RS19005 integrase no data 45 45
  Sphingobium sp. HT1-2 GFF5358 Phage integrase cofit 66 23
  Pseudomonas stutzeri RCH2 Psest_0601 hypothetical protein sig. 80 17
  Caulobacter crescentus NA1000 CCNA_02470 DNA integration/recombination/inversion protein cofit 35 46
  Caulobacter crescentus NA1000 Δfur CCNA_02470 DNA integration/recombination/inversion protein cofit 35 46
  Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 30 68
  Xanthobacter sp. DMC5 GFF3081 Tyrosine recombinase XerD no data 32 53
  Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 34 35
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04165 site-specific tyrosine recombinase XerD no data 26 79
  Phaeobacter inhibens DSM 17395 PGA1_c14060 tyrosine recombinase XerD strong 28 64
  Marinobacter adhaerens HP15 HP15_250 site-specific tyrosine recombinase XerC strong 28 80
  Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 33 35
  Shewanella oneidensis MR-1 SO1448 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 32 69
  Lysobacter sp. OAE881 ABIE51_RS04495 site-specific tyrosine recombinase XerD strong 28 72
  Shewanella loihica PV-4 Shew_0325 tyrosine recombinase XerC (RefSeq) sig. 30 74
  Rhodospirillum rubrum S1H Rru_A3738 Phage integrase (NCBI) no data 29 57
  Shewanella sp. ANA-3 Shewana3_1799 phage integrase family protein (RefSeq) insig. 31 69
  Dinoroseobacter shibae DFL-12 Dshi_1611 integrase family protein (RefSeq) strong 26 64
  Sinorhizobium meliloti 1021 SMc00691 site-specific tyrosine recombinase XerD sig. 29 55
  Escherichia coli ECRC62 BNILDI_14315 Tyrosine-type recombinase/integrase cofit 25 79
  Rhizobium sp. OAE497 ABIE40_RS29765 tyrosine-type recombinase/integrase insig. 20 73
  Dinoroseobacter shibae DFL-12 Dshi_3700 integrase family protein (RefSeq) insig. 29 68
  Desulfovibrio vulgaris Miyazaki F DvMF_0767 integrase family protein (RefSeq) insig. 31 64
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09520 site-specific tyrosine recombinase XerD sig. 27 71
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 27 64
  Paraburkholderia sabiae LMG 24235 QEN71_RS42750 tyrosine-type recombinase/integrase insig. 27 78
  Acinetobacter radioresistens SK82 MPMX26_02230 Tyrosine recombinase XerC no data 25 92
  Burkholderia phytofirmans PsJN BPHYT_RS05275 integrase no data 30 71
  Burkholderia phytofirmans PsJN BPHYT_RS32945 integrase no data 30 71
  Paraburkholderia graminis OAS925 ABIE53_001488 site-specific recombinase XerD sig. 30 71
  Bifidobacterium breve UCC2003 BBR_RS16655 tyrosine recombinase XerC strong 27 77
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4441.1 Tyrosine recombinase XerD sig. 35 30
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5461 Tyrosine recombinase XerD insig. 29 72
  Sphingobium sp. HT1-2 GFF2416 Site-specific tyrosine recombinase XerD strong 27 64
  Shewanella loihica PV-4 Shew_1254 phage integrase family protein (RefSeq) insig. 29 69
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3595 Site-specific recombinase XerD sig. 25 53
  Desulfovibrio vulgaris Hildenborough JW710 DVU2066 xerC site-specific recombinase, phage integrase family (TIGR) sig. 30 72
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1244 Site-specific recombinase XerD no data 28 68
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1749 Site-specific recombinase XerD no data 28 68
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1789 Site-specific recombinase XerD no data 28 68
  Mycobacterium tuberculosis H37Rv Rv2646 Probable integrase insig. 35 38
  Cupriavidus basilensis FW507-4G11 RR42_RS00615 recombinase XerC sig. 29 75
  Bacteroides ovatus ATCC 8483 BACOVA_05411 site-specific recombinase, phage integrase family insig. 28 72
  Bacteroides stercoris CC31F HMPREF1181_RS15715 site-specific integrase insig. 26 70
  Bacteroides thetaiotaomicron VPI-5482 BT4617 integrase (NCBI ptt file) insig. 28 72
  Erwinia amylovora T8 OLJFJH_08835 site-specific tyrosine recombinase XerD strong 24 75
  Bosea sp. OAE506 ABIE41_RS19630 tyrosine-type recombinase/integrase insig. 45 22
  Bacteroides ovatus ATCC 8483 BACOVA_04789 site-specific recombinase, phage integrase family insig. 29 66
  Kangiella aquimarina DSM 16071 B158DRAFT_0244 tyrosine recombinase XerC subunit strong 25 73
  Dechlorosoma suillum PS Dsui_1217 tyrosine recombinase XerD cofit 38 29
  Rhizobium sp. OAE497 ABIE40_RS17685 site-specific tyrosine recombinase XerD sig. 36 35
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15880 site-specific tyrosine recombinase XerD cofit 26 84
  Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 26 84
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 28 73