Homologs of PP_1411 from Pseudomonas putida KT2440

GGDEF domain protein
SEED: GGDEF domain protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_1411 GGDEF domain protein insig. 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4533 hypothetical protein insig. 61 100
o Pseudomonas sp. S08-1 OH686_05940 GGDEF domain protein cofit 60 99
o Shewanella sp. ANA-3 Shewana3_0269 diguanylate cyclase (RefSeq) cofit 42 97
o Shewanella oneidensis MR-1 SO4457 GGDEF domain protein (NCBI ptt file) insig. 42 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_11340 GGDEF domain-containing protein insig. 41 98
o Pectobacterium carotovorum WPP14 HER17_RS13535 sensor domain-containing diguanylate cyclase insig. 39 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2783 Sensory box/GGDEF family protein insig. 50 42
  Pseudomonas fluorescens FW300-N2C3 AO356_04680 diguanylate cyclase insig. 48 42
  Pseudomonas sp. RS175 PFR28_00667 hypothetical protein insig. 45 42
  Acidovorax sp. GW101-3H11 Ac3H11_3356 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 49 32
  Paraburkholderia graminis OAS925 ABIE53_006414 diguanylate cyclase (GGDEF)-like protein insig. 49 32
  Marinobacter adhaerens HP15 HP15_4052 response regulator insig. 49 31
  Rhodopseudomonas palustris CGA009 TX73_021305 diguanylate cyclase insig. 38 44
  Pseudomonas sp. S08-1 OH686_21285 hypothetical protein cofit 47 32
  Pseudomonas stutzeri RCH2 Psest_0767 diguanylate cyclase (GGDEF) domain sig. 46 36
  Cupriavidus basilensis FW507-4G11 RR42_RS25885 diguanylate cyclase insig. 47 38
  Desulfovibrio vulgaris Hildenborough JW710 DVU2570 pleD GGDEF domain/HAMP domain protein (TIGR) insig. 42 39
  Shewanella loihica PV-4 Shew_3023 diguanylate cyclase (RefSeq) insig. 36 41
  Pseudomonas fluorescens FW300-N2E3 AO353_15375 deoxyribonuclease strong 45 32
  Desulfovibrio vulgaris Hildenborough JW710 DVU0416 GGDEF domain protein (TIGR) insig. 42 38
  Marinobacter adhaerens HP15 HP15_850 GGDEF domain protein insig. 42 39
  Rhodopseudomonas palustris CGA009 TX73_012800 GGDEF domain-containing protein insig. 47 33
  Azospirillum brasilense Sp245 AZOBR_RS10245 diguanylate cyclase sig. 46 34
  Rhodanobacter denitrificans MT42 LRK55_RS17540 ligand-binding sensor domain-containing diguanylate cyclase insig. 45 33
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17315 ligand-binding sensor domain-containing diguanylate cyclase insig. 45 33
  Marinobacter adhaerens HP15 HP15_p187g173 protein containing diguanylate cyclase, predicted domains insig. 44 39
  Desulfovibrio vulgaris Miyazaki F DvMF_0509 diguanylate cyclase (RefSeq) insig. 44 38
  Magnetospirillum magneticum AMB-1 AMB_RS21975 GGDEF domain-containing protein cofit 48 34
  Pseudomonas sp. S08-1 OH686_11240 hypothetical protein insig. 46 34
  Marinobacter adhaerens HP15 HP15_4000 GGDEF domain membrane protein insig. 42 39
  Kangiella aquimarina DSM 16071 B158DRAFT_0954 diguanylate cyclase (GGDEF) domain insig. 44 34
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1660 GGDEF domain protein insig. 30 74
  Pseudomonas sp. S08-1 OH686_05720 hypothetical protein insig. 43 36
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01602 diguanylate cyclase (GGDEF) domain-containing protein insig. 32 66
  Azospirillum sp. SherDot2 MPMX19_03993 hypothetical protein insig. 47 33
  Magnetospirillum magneticum AMB-1 AMB_RS23435 GGDEF domain-containing protein insig. 42 38
  Sinorhizobium meliloti 1021 SMc01370 response regulator PleD insig. 40 41
  Pseudomonas sp. RS175 PFR28_04630 hypothetical protein insig. 39 42
  Magnetospirillum magneticum AMB-1 AMB_RS17460 PAS domain S-box protein cofit 45 34
  Pseudomonas simiae WCS417 PS417_00910 diguanylate cyclase insig. 41 39
  Acidovorax sp. GW101-3H11 Ac3H11_4322 Bll3041 protein insig. 41 38
  Azospirillum brasilense Sp245 AZOBR_RS15555 transcriptional regulator insig. 45 34
  Desulfovibrio vulgaris Miyazaki F DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) insig. 45 36
  Magnetospirillum magneticum AMB-1 AMB_RS23665 GGDEF domain-containing protein insig. 43 34
  Pseudomonas fluorescens FW300-N2E3 AO353_11520 diguanylate cyclase strong 41 37
  Pseudomonas sp. RS175 PFR28_01649 hypothetical protein insig. 40 40
  Pseudomonas fluorescens SBW25 PFLU_RS00925 sensor domain-containing diguanylate cyclase insig. 40 39
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00925 sensor domain-containing diguanylate cyclase sig. 40 39
  Pseudomonas syringae pv. syringae B728a Psyr_1125 GGDEF domain protein insig. 36 52
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1125 GGDEF domain protein insig. 36 52
  Shewanella loihica PV-4 Shew_3381 diguanylate cyclase (RefSeq) strong 45 32
  Marinobacter adhaerens HP15 HP15_4072 diguanylate cyclase with PAS/PAC sensor insig. 46 31
  Azospirillum brasilense Sp245 AZOBR_RS09565 diguanylate cyclase insig. 43 33
  Pseudomonas fluorescens GW456-L13 PfGW456L13_588 GGDEF domain protein insig. 40 34
  Cupriavidus basilensis FW507-4G11 RR42_RS01480 hypothetical protein insig. 47 33
  Desulfovibrio vulgaris Miyazaki F DvMF_1014 diguanylate cyclase (RefSeq) insig. 42 34
  Desulfovibrio vulgaris Hildenborough JW710 DVU3068 GAF domain/sensory box/EAL domain protein (TIGR) insig. 47 32
  Shewanella sp. ANA-3 Shewana3_3733 diguanylate cyclase (RefSeq) sig. 43 32
  Pseudomonas simiae WCS417 PS417_12810 diguanylate cyclase insig. 45 35
  Magnetospirillum magneticum AMB-1 AMB_RS16670 diguanylate cyclase insig. 40 40
  Kangiella aquimarina DSM 16071 B158DRAFT_0300 diguanylate cyclase (GGDEF) domain insig. 38 40
  Acidovorax sp. GW101-3H11 Ac3H11_1766 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 45 37
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_936 GGDEF domain protein cofit 40 39
  Pseudomonas stutzeri RCH2 Psest_3192 diguanylate cyclase (GGDEF) domain strong 48 33
  Acidovorax sp. GW101-3H11 Ac3H11_3285 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 48 33
  Azospirillum sp. SherDot2 MPMX19_01436 hypothetical protein insig. 42 37
  Pseudomonas simiae WCS417 PS417_00435 DeoR faimly transcriptional regulator insig. 42 34
  Dickeya dadantii 3937 DDA3937_RS18390 GGDEF domain-containing protein insig. 39 40
  Synechococcus elongatus PCC 7942 Synpcc7942_1811 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor sig. 38 40
  Shewanella amazonensis SB2B Sama_3210 GGDEF domain-containing protein (RefSeq) strong 44 32
  Pectobacterium carotovorum WPP14 HER17_RS18660 diguanylate cyclase insig. 37 42
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0300 diguanylate cyclase (GGDEF) domain insig. 46 36
  Rhodopseudomonas palustris CGA009 TX73_008830 diguanylate cyclase insig. 43 32
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1642 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 39 37
  Magnetospirillum magneticum AMB-1 AMB_RS04735 diguanylate cyclase cofit 39 41
  Pseudomonas putida KT2440 PP_0798 GGDEF domain protein insig. 35 62
  Pseudomonas putida KT2440 PP_3932 Diguanylate cyclase insig. 41 42
  Desulfovibrio vulgaris Miyazaki F DvMF_1477 diguanylate cyclase with PAS/PAC sensor (RefSeq) sig. 45 34
  Pseudomonas fluorescens SBW25 PFLU_RS13490 sensor domain-containing diguanylate cyclase insig. 44 35
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13490 sensor domain-containing diguanylate cyclase insig. 44 35
  Pseudomonas fluorescens FW300-N2C3 AO356_11435 hypothetical protein insig. 40 34
  Rhodopseudomonas palustris CGA009 TX73_016195 PleD family two-component system response regulator insig. 44 33
  Herbaspirillum seropedicae SmR1 HSERO_RS13895 diguanylate cyclase insig. 42 32
  Pseudomonas fluorescens GW456-L13 PfGW456L13_492 Sensory box/GGDEF family protein insig. 36 39
  Acidovorax sp. GW101-3H11 Ac3H11_2439 FOG: GGDEF domain insig. 45 32
  Marinobacter adhaerens HP15 HP15_3549 diguanylate cyclase insig. 43 34
  Shewanella oneidensis MR-1 SO4207 GGDEF domain protein (NCBI ptt file) strong 42 32
  Shewanella amazonensis SB2B Sama_3537 GGDEF family protein (RefSeq) insig. 41 37
  Azospirillum sp. SherDot2 MPMX19_01264 hypothetical protein insig. 46 32
  Desulfovibrio vulgaris Hildenborough JW710 DVU1805 GGDEF domain protein (TIGR) insig. 40 38
  Acidovorax sp. GW101-3H11 Ac3H11_3582 diguanylate cyclase (GGDEF domain) insig. 42 35
  Pseudomonas fluorescens FW300-N2C3 AO356_24210 diguanylate cyclase sig. 38 37
  Azospirillum sp. SherDot2 MPMX19_04554 Response regulator PleD sig. 47 32
  Azospirillum brasilense Sp245 AZOBR_RS06990 response regulator receiver modulated diguanylate cyclase insig. 45 33
  Dechlorosoma suillum PS Dsui_1361 diguanylate cyclase (GGDEF) domain-containing protein insig. 42 35
  Azospirillum sp. SherDot2 MPMX19_01522 Response regulator PleD insig. 42 34
  Pseudomonas sp. RS175 PFR28_02096 hypothetical protein insig. 41 37
  Ralstonia sp. UNC404CL21Col ABZR87_RS00270 sensor domain-containing diguanylate cyclase insig. 40 39
  Shewanella loihica PV-4 Shew_1681 diguanylate cyclase with PAS/PAC sensor (RefSeq) cofit 38 36