Homologs of PP_1008 from Pseudomonas putida KT2440

RNA polymerase subunit sigma-24

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Pseudomonas sp. BP01 JOY50_RS11380 RNA polymerase sigma factor insig. 100 100
  Pseudomonas putida KT2440 PP_1008 RNA polymerase subunit sigma-24 strong 100 100
o Pseudomonas sp. SVBP6 COO64_RS04525 RNA polymerase sigma factor insig. 84 100
o Pseudomonas orientalis W4I3 QF045_RS24870 sigma-70 family RNA polymerase sigma factor insig. 79 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1886 FIG006045: Sigma factor, ECF subfamily insig. 76 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04694 ECF RNA polymerase sigma factor SigE cofit 79 99
o Pseudomonas fluorescens SBW25 PFLU_RS24340 sigma-70 family RNA polymerase sigma factor insig. 78 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24340 sigma-70 family RNA polymerase sigma factor strong 78 99
o Pseudomonas simiae WCS417 PS417_22700 RNA polymerase subunit sigma-24 strong 78 99
o Pseudomonas sp. DMC3 GFF5154 hypothetical protein insig. 76 99
o Pseudomonas fluorescens FW300-N2E3 AO353_03435 RNA polymerase subunit sigma-24 insig. 75 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_604 FIG006045: Sigma factor, ECF subfamily insig. 74 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2900 FIG006045: Sigma factor, ECF subfamily insig. 76 99
o Pseudomonas fluorescens FW300-N2C3 AO356_05230 RNA polymerase subunit sigma-24 insig. 76 99
o Pseudomonas sp. RS175 PFR28_00559 ECF RNA polymerase sigma factor SigE insig. 73 99
o Pseudomonas syringae pv. syringae B728a Psyr_1107 Sigma-70 region 2 insig. 70 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1107 Sigma-70 region 2 insig. 70 99
o Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 48 96
  Pseudomonas sp. SVBP6 COO64_RS03795 RNA polymerase sigma factor insig. 43 98
o Rhodospirillum rubrum S1H Rru_A2372 Sigma-24 (FecI) (NCBI) insig. 40 97
  Pseudomonas aeruginosa MRSN321 DY961_RS27025 RNA polymerase sigma factor insig. 36 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS31565 RNA polymerase sigma factor sig. 36 91
  Pseudomonas aeruginosa PA14 IKLFDK_24795 RNA polymerase sigma factor insig. 36 91
  Pseudomonas sp. SVBP6 COO64_RS02925 RNA polymerase sigma factor insig. 35 96
  Pseudomonas fluorescens SBW25 PFLU_RS26350 RNA polymerase sigma factor insig. 37 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26350 RNA polymerase sigma factor sig. 37 96
  Pseudomonas sp. BP01 JOY50_RS15495 RNA polymerase sigma factor insig. 35 95
  Pseudomonas sp. SVBP6 COO64_RS11395 RNA polymerase sigma factor insig. 35 95
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 35 98
  Azospirillum brasilense Sp245 AZOBR_RS30810 RNA polymerase sigma70 insig. 34 90
o Rhodopseudomonas palustris CGA009 TX73_012350 RNA polymerase sigma factor insig. 38 91
  Pseudomonas simiae WCS417 PS417_24420 RNA polymerase sigma70 no data 37 96
  Pseudomonas sp. BP01 JOY50_RS19220 RNA polymerase sigma factor insig. 35 89
  Pseudomonas sp. DMC3 GFF1893 putative RNA polymerase sigma factor FecI insig. 34 95
  Pseudomonas simiae WCS417 PS417_05120 RNA polymerase subunit sigma-24 insig. 32 95
  Pseudomonas fluorescens SBW25 PFLU_RS05190 RNA polymerase sigma factor insig. 32 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05190 RNA polymerase sigma factor insig. 32 95
  Pseudomonas fluorescens FW300-N2E3 AO353_04915 RNA polymerase subunit sigma-24 insig. 33 95
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01230 putative RNA polymerase sigma factor FecI insig. 33 92
  Pseudomonas orientalis W4I3 QF045_RS08105 RNA polymerase sigma factor insig. 32 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4951 FIG006045: Sigma factor, ECF subfamily insig. 33 94
  Alteromonas macleodii MIT1002 MIT1002_03920 putative RNA polymerase sigma factor FecI cofit 29 94
  Pectobacterium carotovorum WPP14 HER17_RS14055 sigma-70 family RNA polymerase sigma factor insig. 35 97
  Pseudomonas aeruginosa MRSN321 DY961_RS15880 RNA polymerase sigma factor sig. 32 98
  Pseudomonas aeruginosa PA14 IKLFDK_17505 RNA polymerase subunit sigma-70 insig. 32 98
  Pseudomonas aeruginosa PUPa3 DQ20_RS41200 RNA polymerase sigma factor insig. 32 98
  Pseudomonas aeruginosa MRSN321 DY961_RS18835 RNA polymerase sigma factor sig. 31 86
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma no data 31 86
  Pseudomonas aeruginosa PUPa3 DQ20_RS52975 RNA polymerase sigma factor insig. 31 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2727 FIG006045: Sigma factor, ECF subfamily insig. 33 87
  Azospirillum brasilense Sp245 AZOBR_RS29160 putative RNA polymerase sigma-70 factor ECF subfamily insig. 29 93
  Azospirillum sp. SherDot2 MPMX19_03082 ECF RNA polymerase sigma factor SigE insig. 30 93
  Azospirillum sp. SherDot2 MPMX19_03247 putative RNA polymerase sigma factor FecI insig. 30 95
  Azospirillum brasilense Sp245 AZOBR_RS23325 RNA polymerase sigma70 insig. 29 96
  Sphingobium sp. HT1-2 GFF5162 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 32 89
  Rhodospirillum rubrum S1H Rru_A0883 Sigma-24 (FecI) (NCBI) insig. 31 92
  Pseudomonas sp. SVBP6 COO64_RS12800 RNA polymerase sigma factor insig. 33 82
  Pseudomonas sp. DMC3 GFF4554 hypothetical protein cofit 30 98
  Pseudomonas sp. S08-1 OH686_01025 hypothetical protein insig. 27 92
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09435 RNA polymerase sigma factor insig. 31 92
  Variovorax sp. SCN45 GFF1723 Extracytoplasmic function (ECF) sigma factor VreI no data 32 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2293 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 30 92
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 34 84
  Pseudomonas aeruginosa MRSN321 DY961_RS09155 vreI;inference=COORDINATES RNA polymerase sigma factor VreI sig. 34 99
  Pseudomonas aeruginosa PA14 IKLFDK_02765 RNA polymerase sigma factor VreI insig. 34 99
  Pseudomonas aeruginosa PUPa3 DQ20_RS58865 vreI;inference=COORDINATES RNA polymerase sigma factor VreI sig. 34 99
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 30 82
  Pseudomonas fluorescens FW300-N2C3 AO356_02895 RNA polymerase subunit sigma-70 strong 29 98
  Alteromonas macleodii MIT1002 MIT1002_01237 Sigma-24 cofit 29 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_216 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 29 98
  Pseudomonas simiae WCS417 PS417_11245 RNA polymerase subunit sigma-24 insig. 31 95
  Pseudomonas sp. SVBP6 COO64_RS18740 RNA polymerase factor sigma-70 cofit 30 92
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 30 84
  Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 32 94
  Pseudomonas aeruginosa MRSN321 DY961_RS18585 pvdS;inference=COORDINATES pyoverdine signaling pathway sigma factor PvdS insig. 30 94
  Pseudomonas aeruginosa PA14 IKLFDK_11920 pyoverdine signaling pathway sigma factor PvdS sig. 30 94
  Pseudomonas aeruginosa PUPa3 DQ20_RS59800 pvdS;inference=COORDINATES pyoverdine signaling pathway sigma factor PvdS insig. 30 94
  Pseudomonas sp. RS175 PFR28_01023 hypothetical protein sig. 29 95
  Variovorax sp. SCN45 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 31 89
  Sphingobium sp. HT1-2 GFF5333 sigma factor cofit 31 94
  Pseudomonas fluorescens SBW25 PFLU_RS11840 RNA polymerase sigma factor insig. 30 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11840 RNA polymerase sigma factor sig. 30 95
  Acinetobacter baumannii LAC-4 RR41_RS08490 sigma-70 family RNA polymerase sigma factor strong 32 86
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 31 84
  Pseudomonas fluorescens FW300-N2E3 AO353_19345 RNA polymerase subunit sigma-70 insig. 29 94
  Pseudomonas fluorescens SBW25 PFLU_RS21525 RNA polymerase factor sigma-70 insig. 30 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21525 RNA polymerase factor sigma-70 sig. 30 92
  Pseudomonas orientalis W4I3 QF045_RS21700 RNA polymerase factor sigma-70 no data 30 92
  Pseudomonas simiae WCS417 PS417_19555 RNA polymerase sigma70 strong 30 92
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2404 Sigma factor PvdS, controling pyoverdin biosynthesis sig. 29 91
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24305 hypothetical protein sig. 28 96
  Pseudomonas orientalis W4I3 QF045_RS19140 sigma-70 family RNA polymerase sigma factor insig. 36 84
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09540 sigma-70 family RNA polymerase sigma factor no data 32 85
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1181 FIG006045: Sigma factor, ECF subfamily insig. 29 86
  Pseudomonas sp. RS175 PFR28_00232 putative RNA polymerase sigma factor FecI insig. 33 84
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04111 hypothetical protein insig. 30 92
  Pseudomonas sp. DMC3 GFF1353 putative RNA polymerase sigma factor FecI cofit 32 86
  Sphingobium sp. HT1-2 GFF4047 RNA polymerase ECF-type sigma factor cofit 30 96
  Xanthobacter sp. DMC5 GFF2424 putative RNA polymerase sigma factor FecI insig. 35 86
  Pseudomonas sp. BP01 JOY50_RS00025 RNA polymerase factor sigma-70 insig. 30 94
  Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 25 99
  Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 34 84
  Pseudomonas fluorescens SBW25 PFLU_RS28550 RNA polymerase sigma factor insig. 29 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28550 RNA polymerase sigma factor insig. 29 94
  Cellulophaga baltica 18 M666_RS00810 sigma-70 family RNA polymerase sigma factor insig. 27 91
  Herbaspirillum seropedicae SmR1 HSERO_RS11705 extracytoplasmic-function sigma-70 factor insig. 26 94
  Pseudomonas sp. BP01 JOY50_RS02475 sigma-70 family RNA polymerase sigma factor no data 35 81
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS05075 RNA polymerase sigma factor insig. 34 85
  Variovorax sp. SCN45 GFF2440 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 30 88
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11895 hypothetical protein insig. 27 91
  Pseudomonas sp. SVBP6 COO64_RS18805 sigma-70 family RNA polymerase sigma factor insig. 35 81
  Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 30 79
  Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 30 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 30 84
  Pseudomonas putida KT2440 PP_4244 alternative sigma factor sig. 29 94
  Sphingobium sp. HT1-2 GFF2714 FIG006045: Sigma factor, ECF subfamily insig. 29 91
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 31 86
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01536 hypothetical protein cofit 29 86
  Bacteroides thetaiotaomicron VPI-5482 BT2463 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 26 88
  Pseudomonas sp. BP01 JOY50_RS12920 RNA polymerase sigma factor insig. 31 82
  Pseudomonas sp. SVBP6 COO64_RS25100 sigma-70 family RNA polymerase sigma factor insig. 31 89
  Variovorax sp. SCN45 GFF784 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 30 85
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00205 RNA polymerase sigma factor no data 28 80
  Phocaeicola dorei CL03T12C01 ABI39_RS08670 RNA polymerase sigma-70 factor cofit 28 86
  Pseudomonas sp. BP01 JOY50_RS12755 sigma-70 family RNA polymerase sigma factor insig. 32 86
  Dechlorosoma suillum PS Dsui_2948 RNA polymerase sigma factor, sigma-70 family insig. 35 86
  Pseudomonas fluorescens SBW25 PFLU_RS06940 sigma-70 family RNA polymerase sigma factor insig. 29 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06940 sigma-70 family RNA polymerase sigma factor sig. 29 86
  Sphingobium sp. HT1-2 GFF1845 hypothetical protein cofit 31 92
  Pseudomonas orientalis W4I3 QF045_RS12270 sigma-70 family RNA polymerase sigma factor insig. 34 85
  Xanthobacter sp. DMC5 GFF2704 putative RNA polymerase sigma factor FecI insig. 33 86
  Pseudomonas sp. SVBP6 COO64_RS16360 RNA polymerase sigma factor sig. 30 86
  Bacteroides ovatus ATCC 8483 BACOVA_03283 RNA polymerase sigma-70 factor insig. 28 78
  Sphingobium sp. HT1-2 GFF3691 RNA polymerase ECF-type sigma factor cofit 32 85
  Pseudomonas fluorescens FW300-N2C3 AO356_21175 RNA polymerase subunit sigma strong 30 81
  Pseudomonas fluorescens SBW25 PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 34 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 34 82
  Pseudomonas simiae WCS417 PS417_28525 RNA polymerase sigma factor insig. 34 82
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 31 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 29 86
  Methylophilus sp. DMC18 GFF1862 putative RNA polymerase sigma factor FecI insig. 29 95
  Variovorax sp. OAS795 ABID97_RS21515 sigma-70 family RNA polymerase sigma factor no data 29 86
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 29 86
  Rhodopseudomonas palustris CGA009 TX73_006850 RNA polymerase sigma factor insig. 28 98
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily insig. 36 80
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_641 Extracytoplasmic function (ECF) sigma factor VreI insig. 34 84
  Pseudomonas sp. BP01 JOY50_RS18970 sigma-70 family RNA polymerase sigma factor insig. 31 86
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15920 sigma-70 family RNA polymerase sigma factor insig. 30 92
  Pseudomonas sp. BP01 JOY50_RS24800 sigma-70 family RNA polymerase sigma factor insig. 30 84
  Bacteroides thetaiotaomicron VPI-5482 BT1817 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 29 89
  Pseudomonas orientalis W4I3 QF045_RS09635 RNA polymerase sigma factor insig. 28 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1926 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 28 74
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 33 81
  Phocaeicola dorei CL03T12C01 ABI39_RS04680 RNA polymerase sigma factor insig. 33 89
  Sinorhizobium meliloti 1021 SMc04203 RNA polymerase sigma factor FECI protein insig. 31 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5307 FIG006045: Sigma factor, ECF subfamily strong 30 84
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0778 RNA polymerase sigma factor, sigma-70 family insig. 29 86
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 29 86
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00175 putative RNA polymerase sigma factor FecI cofit 32 84
  Pseudomonas fluorescens FW300-N2C3 AO356_24740 RNA polymerase subunit sigma-24 insig. 31 95
  Pseudomonas putida KT2440 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily strong 31 81
  Bacteroides ovatus ATCC 8483 BACOVA_00154 RNA polymerase sigma-70 factor insig. 25 91
  Pseudomonas orientalis W4I3 QF045_RS02910 sigma-70 family RNA polymerase sigma factor insig. 31 79
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 30 81
  Pseudomonas fluorescens FW300-N2E3 AO353_24020 RNA polymerase subunit sigma insig. 29 95
  Variovorax sp. SCN45 GFF6854 RNA polymerase ECF-type sigma factor insig. 29 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 30 81
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 30 86
  Pseudomonas syringae pv. syringae B728a Psyr_1943 Sigma-70 region 2 strong 28 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1943 Sigma-70 region 2 sig. 28 92
  Pseudomonas syringae pv. syringae B728a Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 32 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 32 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3565 heme uptake regulator insig. 31 94
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 28 88
  Pseudomonas sp. BP01 JOY50_RS22705 RNA polymerase sigma factor insig. 33 85
  Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 30 86
  Serratia liquefaciens MT49 IAI46_11745 sigma-70 family RNA polymerase sigma factor no data 30 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 29 85
  Bacteroides ovatus ATCC 8483 BACOVA_02944 RNA polymerase sigma-70 factor insig. 29 75
  Variovorax sp. SCN45 GFF1645 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 28 91
  Pseudomonas fluorescens SBW25 PFLU_RS05170 sigma-70 family RNA polymerase sigma factor insig. 32 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05170 sigma-70 family RNA polymerase sigma factor strong 32 84
  Pseudomonas simiae WCS417 PS417_09740 RNA polymerase subunit sigma-24 insig. 31 85
  Pseudomonas fluorescens FW300-N2C3 AO356_16910 RNA polymerase subunit sigma insig. 29 84
  Variovorax sp. SCN45 GFF791 RNA polymerase sigma factor RpoE insig. 28 90
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00640 sigma-70 family RNA polymerase sigma factor cofit 27 94
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12120 RNA polymerase sigma factor strong 32 89
  Castellaniella sp019104865 MT123 ABCV34_RS11175 sigma-70 family RNA polymerase sigma factor insig. 31 81
  Phocaeicola dorei CL03T12C01 ABI39_RS02030 RNA polymerase sigma-70 factor insig. 31 89
  Pseudomonas sp. DMC3 GFF3003 hypothetical protein insig. 31 98
  Rhodospirillum rubrum S1H Rru_A2397 Sigma-24 (FecI) (NCBI) insig. 28 91
  Pseudomonas sp. RS175 PFR28_01609 hypothetical protein sig. 34 87
  Pseudomonas sp. DMC3 GFF570 putative RNA polymerase sigma factor FecI cofit 33 79
  Pseudomonas sp. DMC3 GFF1889 putative RNA polymerase sigma factor FecI cofit 31 88
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15455 RNA polymerase sigma factor insig. 31 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 31 81
  Bacteroides ovatus ATCC 8483 BACOVA_04866 RNA polymerase sigma-70 factor insig. 26 95
  Pseudomonas fluorescens FW300-N2C3 AO356_21710 RNA polymerase subunit sigma insig. 32 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2098 heme uptake regulator insig. 32 84
  Caulobacter crescentus NA1000 CCNA_01187 RNA polymerase ECF-type sigma factor insig. 30 85
  Caulobacter crescentus NA1000 Δfur CCNA_01187 RNA polymerase ECF-type sigma factor cofit 30 85
  Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 28 81
  Pseudomonas fluorescens SBW25 PFLU_RS17395 sigma-70 family RNA polymerase sigma factor insig. 27 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17395 sigma-70 family RNA polymerase sigma factor strong 27 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 29 86
  Acidovorax sp. GW101-3H11 Ac3H11_1622 RNA polymerase sigma factor insig. 29 79
  Sphingobium sp. HT1-2 GFF2715 sigma factor insig. 29 91
  Pseudomonas aeruginosa MRSN321 DY961_RS18335 fpvI;inference=COORDINATES pyoverdine signaling pathway sigma factor FpvI insig. 33 86
  Pseudomonas aeruginosa PA14 IKLFDK_11700 pyoverdine signaling pathway sigma factor FpvI sig. 33 86
  Pseudomonas aeruginosa PUPa3 DQ20_RS59570 fpvI;inference=COORDINATES pyoverdine signaling pathway sigma factor FpvI insig. 33 86
  Pseudomonas putida KT2440 PP_3086 putative RNA polymerase sigma-70 factor insig. 29 85
  Pseudomonas fluorescens FW300-N2C3 AO356_21215 RNA polymerase subunit sigma-24 insig. 30 85
  Bacteroides ovatus ATCC 8483 BACOVA_01682 RNA polymerase sigma-70 factor insig. 29 82
  Variovorax sp. SCN45 GFF2401 hypothetical protein insig. 29 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS14060 sigma-70 family RNA polymerase sigma factor insig. 29 89
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04645 sigma-70 family RNA polymerase sigma factor cofit 28 91
  Phocaeicola dorei CL03T12C01 ABI39_RS06270 RNA polymerase sigma-70 factor insig. 27 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10800 RNA polymerase sigma-70 factor insig. 27 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 32 85
  Bacteroides ovatus ATCC 8483 BACOVA_00883 RNA polymerase sigma-70 factor insig. 30 74
  Paraburkholderia graminis OAS925 ABIE53_002123 RNA polymerase sigma factor (sigma-70 family) sig. 28 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2986 RNA polymerase sigma factor, sigma-70 family insig. 32 88
  Pseudomonas fluorescens FW300-N2C3 AO356_07625 RNA polymerase subunit sigma insig. 31 84
  Sphingobium sp. HT1-2 GFF2039 RNA polymerase ECF-type sigma factor cofit 30 89
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00780 RNA polymerase sigma-70 factor insig. 30 74
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02400 RNA polymerase sigma factor cofit 28 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11490 RNA polymerase sigma-70 factor insig. 25 87
  Shewanella oneidensis MR-1 SO3551 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 33 84
  Variovorax sp. OAS795 ABID97_RS21425 sigma-70 family RNA polymerase sigma factor insig. 29 91
  Pseudomonas sp. SVBP6 COO64_RS04025 sigma-70 family RNA polymerase sigma factor insig. 30 85
  Burkholderia phytofirmans PsJN BPHYT_RS21530 RNA polymerase subunit sigma-24 insig. 28 82
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17775 hypothetical protein sig. 24 87
  Pseudomonas sp. BP01 JOY50_RS19840 sigma-70 family RNA polymerase sigma factor no data 27 85
  Rhodopseudomonas palustris CGA009 TX73_016965 RNA polymerase sigma factor insig. 30 89
  Herbaspirillum seropedicae SmR1 HSERO_RS15420 RNA polymerase subunit sigma-24 insig. 30 82
  Variovorax sp. SCN45 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 28 88
  Rhodopseudomonas palustris CGA009 TX73_006880 sigma-70 family RNA polymerase sigma factor insig. 32 86
  Pseudomonas orientalis W4I3 QF045_RS08085 sigma-70 family RNA polymerase sigma factor insig. 30 79
  Rhodanobacter sp. FW510-T8 OKGIIK_12575 rpoE RNA polymerase subunit sigma-24 insig. 30 79
  Agrobacterium fabrum C58 Atu5309 ECF family RNA polymerase sigma factor no data 29 79
  Pseudomonas segetis P6 ACVTMO_RS10610 RNA polymerase sigma factor insig. 29 91
  Bacteroides thetaiotaomicron VPI-5482 BT3010 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 28 75
  Bacteroides stercoris CC31F HMPREF1181_RS04900 RNA polymerase sigma-70 factor insig. 26 89
  Bacteroides thetaiotaomicron VPI-5482 BT4070 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 25 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4566 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 25 89
  Pseudomonas putida KT2440 PP_2192 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein insig. 33 91
  Ralstonia sp. UNC404CL21Col ABZR87_RS16160 sigma-70 family RNA polymerase sigma factor insig. 32 79
  Paraburkholderia graminis OAS925 ABIE53_002674 RNA polymerase sigma factor (sigma-70 family) insig. 31 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3412 FIG006045: Sigma factor, ECF subfamily insig. 30 84
  Herbaspirillum seropedicae SmR1 HSERO_RS12165 RNA polymerase sigma factor insig. 30 93