Homologs of OHPLBJKB_02396 from Escherichia coli HS(pFamp)R (ATCC 700891)

Cyclic di-GMP phosphodiesterase PdeR
SEED: FIG00637999: hypothetical protein
KEGG: cyclic di-GMP phosphodiesterase Gmr

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02396 Cyclic di-GMP phosphodiesterase PdeR insig. 100 100
o Escherichia coli BL21 ECD_01262 cyclic-di-GMP phosphodiesterase; csgD regulator; modulator of RNase II stability insig. 100 100
o Escherichia coli ECOR27 NOLOHH_20190 pdeR cyclic di-GMP phosphodiesterase no data 99 100
o Escherichia coli ECOR38 HEPCGN_25675 pdeR cyclic di-GMP phosphodiesterase cofit 99 100
o Escherichia coli ECRC101 OKFHMN_02525 pdeR cyclic di-GMP phosphodiesterase no data 99 100
o Escherichia coli ECRC102 NIAGMN_26695 pdeR cyclic di-GMP phosphodiesterase insig. 99 100
o Escherichia coli ECRC99 KEDOAH_26240 pdeR cyclic di-GMP phosphodiesterase no data 99 100
o Escherichia coli ECRC62 BNILDI_18340 pdeR cyclic di-GMP phosphodiesterase insig. 99 100
o Escherichia coli ECRC98 JDDGAC_05070 pdeR cyclic di-GMP phosphodiesterase no data 99 100
o Escherichia coli BW25113 b1285 gmr modulator of Rnase II stability (NCBI) strong 99 100
o Escherichia coli Nissle 1917 ECOLIN_RS07755 cyclic di-GMP phosphodiesterase insig. 99 100
o Escherichia fergusonii Becca EFB2_02639 Cyclic di-GMP phosphodiesterase PdeR insig. 99 100
o Enterobacter asburiae PDN3 EX28DRAFT_0960 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 79 99
o Enterobacter sp. TBS_079 MPMX20_02488 Cyclic di-GMP phosphodiesterase PdeR strong 79 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2699 FIG00637999: hypothetical protein insig. 80 99
  Escherichia coli ECRC101 MCAODC_15745 pdeR cyclic di-GMP phosphodiesterase insig. 99 79
o Pantoea sp. MT58 IAI47_09305 cyclic di-GMP phosphodiesterase strong 69 99
o Serratia liquefaciens MT49 IAI46_24280 cyclic di-GMP phosphodiesterase insig. 65 97
o Rahnella sp. WP5 EX31_RS08335 cyclic di-GMP phosphodiesterase sig. 58 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS10895 cyclic di-GMP phosphodiesterase strong 56 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02926 diguanylate cyclase/phosphodiesterase strong 57 98
o Paraburkholderia graminis OAS925 ABIE53_005863 cyclic di-GMP phosphodiesterase Gmr strong 56 99
o Burkholderia phytofirmans PsJN BPHYT_RS27100 RNase II stability modulator strong 55 99
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 37 83
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 84
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 37 84
  Rhodospirillum rubrum S1H Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 37 82
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 37 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 37 83
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 37 83
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 36 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 36 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 36 84
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 36 90
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 36 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 36 83
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 36 84
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 39 73
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 82
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 35 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 35 91
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 37 81
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 82
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 35 84
  Shewanella sp. ANA-3 Shewana3_0133 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 37 82
  Shewanella oneidensis MR-1 SO0141 sensory box protein (NCBI ptt file) strong 36 84
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 38 81
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 34 88
  Dechlorosoma suillum PS Dsui_2547 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 37 85
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 37 83
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 83
  Variovorax sp. SCN45 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 41 66
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 37 81
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 38 80
  Dechlorosoma suillum PS Dsui_0506 diguanylate cyclase (GGDEF) domain-containing protein cofit 40 74
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 35 82
  Ralstonia solanacearum PSI07 RPSI07_RS21070 PAS domain S-box protein insig. 37 84
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 36 81
  Pseudomonas sp. S08-1 OH686_13050 Sensory box/GGDEF family protein cofit 37 82
  Ralstonia solanacearum GMI1000 RS_RS18985 GGDEF domain-containing protein insig. 39 67
  Desulfovibrio vulgaris Miyazaki F DvMF_1544 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 35 82
  Burkholderia phytofirmans PsJN BPHYT_RS03250 diguanylate cyclase insig. 43 64
  Cupriavidus basilensis FW507-4G11 RR42_RS22465 membrane protein insig. 40 66
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 39 74
  Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 39 74
  Ralstonia solanacearum GMI1000 RS_RS02945 PAS domain S-box protein insig. 39 74
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1818 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 87
  Ralstonia solanacearum GMI1000 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 64
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04630 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 43 64
  Ralstonia sp. UNC404CL21Col ABZR87_RS22185 EAL domain-containing protein insig. 38 69
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21640 GGDEF domain-containing protein insig. 38 67
  Ralstonia solanacearum UW163 UW163_RS17545 GGDEF domain-containing protein insig. 38 67
  Acidovorax sp. GW101-3H11 Ac3H11_5002 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 64
  Dechlorosoma suillum PS Dsui_2605 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 37 79
  Ralstonia solanacearum PSI07 RPSI07_RS01485 GGDEF domain-containing protein insig. 38 67
  Rhodospirillum rubrum S1H Rru_A2406 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) insig. 36 82
  Pseudomonas syringae pv. syringae B728a Psyr_4493 PAS:GGDEF insig. 39 64
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4493 PAS:GGDEF cofit 39 64
  Shewanella loihica PV-4 Shew_0041 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) strong 34 90
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 34 83
  Shewanella amazonensis SB2B Sama_2448 sensory box protein (RefSeq) insig. 35 83
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 35 82
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 36 82
  Castellaniella sp019104865 MT123 ABCV34_RS15140 EAL domain-containing protein insig. 34 82
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 34 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 64
  Acidovorax sp. GW101-3H11 Ac3H11_4486 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 82
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 34 82
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 35 83
  Ralstonia solanacearum PSI07 RPSI07_RS21500 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 64
  Acidovorax sp. GW101-3H11 Ac3H11_3877 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 80
  Acidovorax sp. GW101-3H11 Ac3H11_2715 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 81
  Pseudomonas simiae WCS417 PS417_28235 diguanylate cyclase insig. 35 82
  Pseudomonas fluorescens FW300-N2C3 AO356_24220 diguanylate cyclase insig. 40 64
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 35 83
  Pseudomonas stutzeri RCH2 Psest_4097 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 35 88
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 35 83
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 37 81
  Herbaspirillum seropedicae SmR1 HSERO_RS13620 diguanylate cyclase strong 38 70
  Pseudomonas fluorescens FW300-N2E3 AO353_23975 diguanylate cyclase strong 37 66