Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Azospirillum sp. SherDot2 | MPMX19_01792 | | Putative HTH-type transcriptional regulator YhjB | insig. | 100 | 100 |
o | Azospirillum brasilense Sp245 | AZOBR_RS08040 | | regulator | insig. | 68 | 98 |
| Azospirillum sp. SherDot2 | MPMX19_04863 | | Transcriptional regulatory protein LnrK | insig. | 41 | 92 |
| Pseudomonas aeruginosa PA14 | IKLFDK_19985 | | two-component system response regulator NarL | insig. | 39 | 92 |
| Azospirillum sp. SherDot2 | MPMX19_01390 | | Transcriptional regulatory protein LnrK | insig. | 38 | 85 |
| Magnetospirillum magneticum AMB-1 | AMB_RS11155 | | DNA-binding response regulator | cofit | 33 | 91 |
| Azospirillum brasilense Sp245 | AZOBR_RS10290 | | transcriptional regulator | strong | 37 | 85 |
| Rhodospirillum rubrum S1H | Rru_A3229 | | Two Component Transcriptional Regulator, LuxR family (NCBI) | insig. | 36 | 91 |
| Azospirillum sp. SherDot2 | MPMX19_05115 | | Transcriptional regulatory protein DegU | insig. | 34 | 90 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_22075 | | hypothetical protein | strong | 37 | 91 |
| Azospirillum brasilense Sp245 | AZOBR_RS12455 | | transcriptional regulator | sig. | 35 | 87 |
| Magnetospirillum magneticum AMB-1 | AMB_RS19675 | | DNA-binding response regulator | cofit | 35 | 89 |
| Pseudomonas sp. RS175 | PFR28_01628 | | Nitrate/nitrite response regulator protein NarL | insig. | 39 | 89 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_725 | | Nitrate/nitrite response regulator protein | strong | 37 | 89 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_25185 | | hypothetical protein | sig. | 37 | 89 |
| Azospirillum sp. SherDot2 | MPMX19_01612 | | Transcriptional regulatory protein DegU | insig. | 33 | 87 |
| Pseudomonas sp. SVBP6 | COO64_RS19960 | erdR | response regulator transcription factor ErdR | insig. | 32 | 88 |
| Marinobacter adhaerens HP15 | HP15_3183 | | two component transcriptional regulator, LuxR family | strong | 32 | 92 |
| Pseudomonas simiae WCS417 | PS417_15740 | | hypothetical protein | insig. | 36 | 87 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_16835 | | LuxR family transcriptional regulator | sig. | 32 | 88 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5741 | | Nitrate/nitrite response regulator protein | no data | 37 | 91 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_22350 | | LuxR family transcriptional regulator | sig. | 31 | 87 |
| Pseudomonas sp. SVBP6 | COO64_RS14210 | narL | two-component system response regulator NarL | insig. | 36 | 91 |
| Azospirillum brasilense Sp245 | AZOBR_RS20235 | | transcriptional regulator | strong | 33 | 87 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1384 | | regulatory protein, LuxR:Response regulator receiver | no data | 32 | 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1384 | | regulatory protein, LuxR:Response regulator receiver | no data | 32 | 88 |
| Azospirillum brasilense Sp245 | AZOBR_RS12735 | | transcriptional regulator | cofit | 32 | 88 |
| Pseudomonas stutzeri RCH2 | Psest_3491 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | no data | 34 | 85 |
| Pseudomonas sp. S08-1 | OH686_18240 | | Two-component transcriptional response regulator, LuxR family | cofit | 31 | 91 |
| Acinetobacter radioresistens SK82 | MPMX26_02902 | | Transcriptional activator protein ExaE | strong | 31 | 88 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4662 | | Transcriptional regulator, LuxR family | insig. | 31 | 88 |
| Pseudomonas sp. BP01 | JOY50_RS23810 | erdR | response regulator transcription factor ErdR | insig. | 31 | 88 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3150 | | Transcriptional regulator, LuxR family | no data | 31 | 88 |
| Alteromonas macleodii MIT1002 | MIT1002_03317 | | Transcriptional regulatory protein DevR (DosR) | strong | 30 | 88 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS19300 | | response regulator transcription factor | insig. | 35 | 88 |
| Shewanella sp. ANA-3 | Shewana3_1732 | | two component LuxR family transcriptional regulator (RefSeq) | strong | 32 | 87 |
| Sinorhizobium meliloti 1021 | SMa1550 | | Response regulator | insig. | 31 | 90 |
| Pseudomonas sp. DMC3 | GFF2117 | | Transcriptional regulatory protein DegU | no data | 31 | 88 |
| Pseudomonas sp. RS175 | PFR28_01803 | | Transcriptional regulatory protein DegU | sig. | 32 | 87 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3528 | | Transcriptional regulator, LuxR family | sig. | 32 | 87 |
| Pseudomonas aeruginosa PA14 | IKLFDK_18400 | | DNA-binding response regulator | insig. | 34 | 87 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_13640 | | DNA-binding response regulator | insig. | 31 | 89 |
| Pantoea sp. MT58 | IAI47_04245 | | two-component system response regulator NarL | sig. | 31 | 90 |
| Shewanella amazonensis SB2B | Sama_2076 | | response regulator receiver protein (RefSeq) | strong | 32 | 88 |
| Azospirillum sp. SherDot2 | MPMX19_04898 | | Transcriptional regulatory protein LnrK | sig. | 32 | 87 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_28105 | | LuxR family transcriptional regulator | strong | 31 | 87 |
| Pseudomonas putida KT2440 | PP_1635 | | DNA-binding response regulator | strong | 31 | 88 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_06500 | citB | DNA-binding response regulator | no data | 36 | 85 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4489 | | Transcriptional regulator, LuxR family | insig. | 32 | 88 |
| Sinorhizobium meliloti 1021 | SM_b21520 | | two-component response regulator protein | insig. | 34 | 86 |
| Pseudomonas fluorescens SBW25 | PFLU_RS05910 | | response regulator transcription factor | no data | 31 | 88 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS05910 | | response regulator transcription factor | sig. | 31 | 88 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1399 | | Transcriptional regulator, LuxR family | strong | 31 | 87 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2986 | | Transcriptional regulator, LuxR family | strong | 31 | 88 |
| Variovorax sp. OAS795 | ABID97_RS05205 | | response regulator transcription factor | insig. | 34 | 88 |
| Pseudomonas simiae WCS417 | PS417_17505 | | LuxR family transcriptional regulator | strong | 32 | 87 |
| Pseudomonas sp. RS175 | PFR28_00478 | | Transcriptional regulatory protein DegU | strong | 31 | 88 |
| Pseudomonas sp. BP01 | JOY50_RS02865 | | response regulator transcription factor | no data | 32 | 87 |
| Marinobacter adhaerens HP15 | HP15_812 | | two component transcriptional regulator, LuxR family | no data | 30 | 90 |
| Shewanella oneidensis MR-1 | SO2648 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | strong | 31 | 87 |
| Magnetospirillum magneticum AMB-1 | AMB_RS13915 | | DNA-binding response regulator | cofit | 32 | 89 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_05640 | | LuxR family transcriptional regulator | strong | 31 | 88 |
| Pseudomonas sp. SVBP6 | COO64_RS23840 | | response regulator transcription factor | insig. | 31 | 91 |
| Rhizobium sp. OAE497 | ABIE40_RS27605 | | response regulator transcription factor | insig. | 34 | 86 |
| Pseudomonas simiae WCS417 | PS417_05840 | | LuxR family transcriptional regulator | strong | 31 | 88 |
| Rhodanobacter denitrificans MT42 | LRK55_RS08190 | | response regulator transcription factor | cofit | 31 | 88 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08425 | | response regulator transcription factor | strong | 31 | 88 |
| Pseudomonas aeruginosa PA14 | IKLFDK_09660 | | Glycerol metabolism activator | insig. | 31 | 87 |
| Pseudomonas stutzeri RCH2 | Psest_2864 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 31 | 89 |
| Alteromonas macleodii MIT1002 | MIT1002_02224 | | Protease production enhancer protein | cofit | 30 | 88 |
| Rhodopseudomonas palustris CGA009 | TX73_004390 | | response regulator transcription factor | strong | 33 | 88 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1470 | | two component transcriptional regulator, LuxR family | insig. | 33 | 94 |
| Pseudomonas putida KT2440 | PP_2665 | | Glycerol metabolism activator | strong | 31 | 87 |
| Magnetospirillum magneticum AMB-1 | AMB_RS04685 | | DNA-binding response regulator | insig. | 31 | 87 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5823 | | Nitrate/nitrite response regulator protein | no data | 35 | 89 |
| Shewanella loihica PV-4 | Shew_1545 | | two component LuxR family transcriptional regulator (RefSeq) | no data | 31 | 88 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.5158.1 | | Transcriptional regulator, LuxR family | strong | 28 | 88 |
| Xanthobacter sp. DMC5 | GFF134 | | Transcriptional regulatory protein DegU | no data | 31 | 93 |
| Lysobacter sp. OAE881 | ABIE51_RS00905 | | response regulator transcription factor | insig. | 38 | 62 |
| Pseudomonas stutzeri RCH2 | Psest_2038 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 31 | 91 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS08535 | | response regulator transcription factor | insig. | 32 | 88 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15195 | | response regulator transcription factor | strong | 32 | 88 |
| Synechocystis sp000284455 PCC 6803 | SGL_RS07850 | | response regulator transcription factor | insig. | 31 | 89 |
| Rhodospirillum rubrum S1H | Rru_A2232 | | Two Component Transcriptional Regulator, LuxR family (NCBI) | no data | 30 | 90 |
| Azospirillum sp. SherDot2 | MPMX19_05507 | | Transcriptional regulatory protein DegU | insig. | 33 | 95 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_23725 | | LuxR family transcriptional regulator | insig. | 30 | 91 |
| Dickeya dadantii 3937 | DDA3937_RS11950 | | two-component system response regulator NarL | sig. | 30 | 92 |
| Variovorax sp. SCN45 | GFF5912 | | Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain | insig. | 32 | 88 |
| Acidovorax sp. GW101-3H11 | Ac3H11_716 | | Transcriptional regulator, LuxR family | no data | 33 | 87 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS20525 | | LuxR family transcriptional regulator | cofit | 32 | 92 |
| Dinoroseobacter shibae DFL-12 | Dshi_2674 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 31 | 88 |
| Pseudomonas sp. BP01 | JOY50_RS02900 | | response regulator transcription factor | no data | 30 | 86 |
| Agrobacterium fabrum C58 | Atu0484 | | two component response regulator | strong | 29 | 89 |
| Variovorax sp. SCN45 | GFF2712 | | no description | insig. | 32 | 90 |
| Azospirillum brasilense Sp245 | AZOBR_RS10280 | | transcriptional regulator | insig. | 32 | 90 |
| Pseudomonas stutzeri RCH2 | Psest_2048 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 31 | 87 |
o | Escherichia coli BL21 | ECD_03368 | | putative DNA-binding transcriptional response regulator | insig. | 30 | 87 |
o | Escherichia coli ECOR27 | NOLOHH_08200 | yhjB | Putative HTH-type transcriptional regulator YhjB | insig. | 30 | 87 |
o | Escherichia coli ECOR38 | HEPCGN_15140 | yhjB | Putative HTH-type transcriptional regulator YhjB | insig. | 30 | 87 |
o | Escherichia coli ECRC100 | OKFHMN_16235 | yhjB | Putative HTH-type transcriptional regulator YhjB | cofit | 30 | 87 |