Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Rhodanobacter denitrificans MT42 | LRK55_RS14075 | | LysR family transcriptional regulator | insig. | 100 | 100 |
o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS14355 | | LysR family transcriptional regulator | insig. | 99 | 100 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS29085 | | LysR family transcriptional regulator | insig. | 77 | 99 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02509 | | DNA-binding transcriptional regulator, LysR family | insig. | 76 | 99 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS02410 | | LysR family transcriptional regulator | insig. | 37 | 93 |
o | Rhodopseudomonas palustris CGA009 | TX73_022195 | | LysR family transcriptional regulator | insig. | 35 | 87 |
o | Dickeya dadantii 3937 | DDA3937_RS14890 | | LysR family transcriptional regulator | insig. | 35 | 95 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3137 | | Transcriptional regulator, LysR family | insig. | 36 | 90 |
o | Pseudomonas sp. RS175 | PFR28_01506 | | putative HTH-type transcriptional regulator YahB | insig. | 37 | 86 |
o | Sinorhizobium meliloti 1021 | SMa0353 | | LysR family transcriptional regulator | insig. | 36 | 86 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_28560 | | LysR family transcriptional regulator | insig. | 36 | 90 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS22310 | | LysR family transcriptional regulator | insig. | 37 | 86 |
o | Rhizobium sp. OAE497 | ABIE40_RS08235 | | LysR family transcriptional regulator | insig. | 35 | 91 |
o | Agrobacterium fabrum C58 | Atu1209 | | transcriptional regulator, LysR family | sig. | 34 | 94 |
o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3906 | | Transcriptional regulator | insig. | 37 | 92 |
o | Herbaspirillum seropedicae SmR1 | HSERO_RS12670 | | LysR family transcriptional regulator | insig. | 36 | 88 |
o | Azospirillum sp. SherDot2 | MPMX19_06778 | | HTH-type transcriptional regulator YhaJ | insig. | 35 | 97 |
o | Enterobacter sp. TBS_079 | MPMX20_02550 | | HTH-type transcriptional regulator YhaJ | insig. | 37 | 88 |
o | Shewanella sp. ANA-3 | Shewana3_1683 | | LysR family transcriptional regulator (RefSeq) | insig. | 34 | 88 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_28710 | | LysR family transcriptional regulator | insig. | 34 | 86 |
o | Caulobacter crescentus NA1000 | CCNA_00832 | | LysR-family transcriptional regulator | cofit | 32 | 86 |
o | Caulobacter crescentus NA1000 Δfur | CCNA_00832 | | LysR-family transcriptional regulator | cofit | 32 | 86 |
o | Shewanella oneidensis MR-1 | SO1907 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 33 | 88 |
| Pseudomonas sp. RS175 | PFR28_05088 | | HTH-type transcriptional regulator YhaJ | insig. | 35 | 93 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3647 | | LysR family transcriptional regulator PA4989 | strong | 35 | 93 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_08825 | | LysR family transcriptional regulator | sig. | 35 | 93 |
o | Pseudomonas putida KT2440 | PP_4929 | | Transcriptional regulator, LysR family | insig. | 34 | 94 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_12995 | | LysR family transcriptional regulator | strong | 33 | 86 |
o | Pseudomonas stutzeri RCH2 | Psest_2565 | | Transcriptional regulator | sig. | 35 | 88 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1450 | | LysR family transcriptional regulator PA4989 | insig. | 32 | 86 |
o | Dechlorosoma suillum PS | Dsui_1258 | | transcriptional regulator | insig. | 33 | 86 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_190 | | LysR family transcriptional regulator PA4989 | insig. | 32 | 86 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS03280 | | LysR family transcriptional regulator | strong | 32 | 86 |
o | Shewanella loihica PV-4 | Shew_1149 | | LysR family transcriptional regulator (RefSeq) | cofit | 31 | 88 |
| Pseudomonas putida KT2440 | PP_4156 | | Transcriptional regulator, LysR family | insig. | 34 | 86 |
| Sinorhizobium meliloti 1021 | SMa1933 | | LysR family transcriptional regulator | insig. | 36 | 70 |
| Sinorhizobium meliloti 1021 | SMa1782 | | LysR family transcriptional regulator | insig. | 32 | 84 |
o | Rahnella sp. WP5 | EX31_RS10990 | | LysR family transcriptional regulator | insig. | 31 | 95 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS02415 | | LysR family transcriptional regulator | insig. | 31 | 92 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS02415 | | LysR family transcriptional regulator | insig. | 31 | 92 |
| Shewanella sp. ANA-3 | Shewana3_4390 | | LysR family transcriptional regulator (RefSeq) | insig. | 30 | 93 |
o | Shewanella amazonensis SB2B | Sama_2849 | | LysR family transcriptional regulator (RefSeq) | insig. | 30 | 86 |
o | Pseudomonas simiae WCS417 | PS417_02340 | | LysR family transcriptional regulator | strong | 30 | 92 |
| Shewanella amazonensis SB2B | Sama_1852 | | LysR family transcriptional regulator (RefSeq) | insig. | 30 | 86 |
| Pseudomonas fluorescens SBW25 | PFLU_RS14965 | | LysR family transcriptional regulator | insig. | 32 | 86 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS14965 | | LysR family transcriptional regulator | sig. | 32 | 86 |
| Shewanella oneidensis MR-1 | SO2438 | | transcriptional regulator, LysR family (NCBI ptt file) | sig. | 28 | 94 |
| Shewanella sp. ANA-3 | Shewana3_1944 | | LysR family transcriptional regulator (RefSeq) | insig. | 28 | 94 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4458 | | Transcriptional regulator, LysR family | insig. | 27 | 85 |
| Pseudomonas simiae WCS417 | PS417_20525 | | LysR family transcriptional regulator | insig. | 26 | 98 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_18280 | | LysR family transcriptional regulator | sig. | 27 | 85 |
o | Klebsiella michiganensis M5al | BWI76_RS06255 | | LysR family transcriptional regulator | insig. | 27 | 88 |
| Pseudomonas fluorescens SBW25 | PFLU_RS22220 | | LysR family transcriptional regulator | insig. | 26 | 98 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS22220 | | LysR family transcriptional regulator | sig. | 26 | 98 |
o | Pseudomonas sp. S08-1 | OH686_05450 | | Transcriptional regulator, LysR family | cofit | 28 | 86 |
| Shewanella loihica PV-4 | Shew_2088 | | LysR family transcriptional regulator (RefSeq) | no data | 29 | 86 |
| Shewanella sp. ANA-3 | Shewana3_1223 | | LysR family transcriptional regulator (RefSeq) | insig. | 28 | 87 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_548 | | Transcriptional regulator, LysR family | insig. | 26 | 85 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_04235 | | LysR family transcriptional regulator | insig. | 26 | 98 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2682 | | Transcriptional regulator, LysR family | insig. | 26 | 98 |
| Shewanella oneidensis MR-1 | SO1965 | | transcriptional regulator, LysR family (NCBI ptt file) | strong | 27 | 87 |
o | Serratia liquefaciens MT49 | IAI46_18615 | | LysR family transcriptional regulator | insig. | 30 | 89 |
| Shewanella oneidensis MR-1 | SO3318 | | transcriptional regulator, LysR family (NCBI ptt file) | sig. | 28 | 91 |
o | Alteromonas macleodii MIT1002 | MIT1002_02374 | | HTH-type transcriptional activator AllS | insig. | 27 | 86 |
| Shewanella loihica PV-4 | Shew_2153 | | LysR family transcriptional regulator (RefSeq) | insig. | 26 | 87 |
| Pseudomonas sp. RS175 | PFR28_00748 | | HTH-type transcriptional regulator YhaJ | sig. | 26 | 98 |
o | Desulfovibrio vulgaris Hildenborough JW710 | DVU0309 | | transcriptional regulator, LysR family (TIGR) | insig. | 31 | 87 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_17780 | | hypothetical protein | insig. | 26 | 87 |
o | Variovorax sp. SCN45 | GFF6397 | | LysR family transcriptional regulator PA2758 | insig. | 31 | 99 |
o | Castellaniella sp019104865 MT123 | ABCV34_RS09070 | | LysR family transcriptional regulator | insig. | 31 | 87 |
| Shewanella sp. ANA-3 | Shewana3_2480 | | LysR family transcriptional regulator (RefSeq) | insig. | 27 | 87 |
| Shewanella loihica PV-4 | Shew_3798 | | LysR family transcriptional regulator (RefSeq) | insig. | 28 | 85 |
| Pseudomonas stutzeri RCH2 | Psest_1624 | | Transcriptional regulator | insig. | 27 | 85 |
| Shewanella amazonensis SB2B | Sama_1388 | | LysR family transcriptional regulator (RefSeq) | insig. | 28 | 88 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_3825 | | transcriptional regulator, LysR family | insig. | 26 | 86 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3825 | | transcriptional regulator, LysR family | insig. | 26 | 86 |
| Pseudomonas putida KT2440 | PP_4539 | | Transcriptional regulator, LysR family | insig. | 26 | 86 |
o | Variovorax sp. OAS795 | ABID97_RS18015 | | LysR family transcriptional regulator | insig. | 30 | 87 |
| Pseudomonas simiae WCS417 | PS417_21935 | | transcriptional regulator | insig. | 30 | 86 |
| Castellaniella sp019104865 MT123 | ABCV34_RS00975 | | LysR family transcriptional regulator | insig. | 27 | 88 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS22625 | | LysR family transcriptional regulator | insig. | 28 | 86 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2844 | | LysR family transcriptional regulator PA2758 | insig. | 29 | 85 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS21225 | | LysR family transcriptional regulator | insig. | 27 | 99 |
| Sinorhizobium meliloti 1021 | SMa0355 | | LysR family transcriptional regulator | insig. | 38 | 46 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01685 | | HTH-type transcriptional regulator YhaJ | insig. | 29 | 83 |
| Escherichia coli Nissle 1917 | ECOLIN_RS11920 | | LysR substrate-binding domain-containing protein | no data | 29 | 83 |
| Shewanella amazonensis SB2B | Sama_1570 | | LysR family transcriptional regulator (RefSeq) | insig. | 25 | 87 |
| Escherichia coli ECRC101 | OKFHMN_24535 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | insig. | 29 | 83 |
| Escherichia coli ECRC101 | MCAODC_20405 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | insig. | 29 | 83 |
| Escherichia coli ECRC102 | NIAGMN_22480 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | insig. | 29 | 83 |
| Escherichia coli ECRC98 | JDDGAC_28645 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | no data | 29 | 83 |
| Escherichia coli ECRC99 | KEDOAH_03615 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | no data | 29 | 83 |
| Variovorax sp. OAS795 | ABID97_RS03460 | | LysR family transcriptional regulator | insig. | 29 | 85 |
| Escherichia coli ECOR27 | NOLOHH_15860 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | insig. | 29 | 83 |
| Escherichia coli BW25113 | b2015 | yeeY | putative transcriptional regulator LYSR-type (VIMSS) | insig. | 29 | 83 |
| Escherichia fergusonii Becca | EFB2_01841 | | HTH-type transcriptional regulator YhaJ | insig. | 29 | 83 |
| Escherichia coli ECRC62 | BNILDI_14760 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | insig. | 29 | 83 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3400 | | LysR-family transcriptional regulator STM3020 | no data | 29 | 86 |
| Escherichia coli ECOR38 | HEPCGN_03240 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | insig. | 29 | 83 |
| Escherichia coli BL21 | ECD_01918 | | LysR family putative transcriptional regulator | insig. | 29 | 83 |