Homologs of HSERO_RS13745 from Herbaspirillum seropedicae SmR1

chain-length determining protein
SEED: Lipopolysaccharide biosynthesis chain length determinant protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS13745 chain-length determining protein insig. 100 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4774 Lipopolysaccharide biosynthesis chain length determinant protein insig. 44 100
o Alteromonas macleodii MIT1002 MIT1002_02873 tyrosine kinase insig. 32 99
o Rhodanobacter denitrificans MT42 LRK55_RS12835 GNVR domain-containing protein insig. 34 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS13135 Wzz/FepE/Etk N-terminal domain-containing protein insig. 34 96
o Rhodospirillum rubrum S1H Rru_A3118 Lipopolysaccharide biosynthesis (NCBI) insig. 33 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_4191 polysaccharide chain length determinant protein, PEP-CTERM locus subfamily cofit 29 100
o Marinobacter adhaerens HP15 HP15_1923 PEP-CTERM locus polysaccharide chain length determinant insig. 25 98
o Pseudomonas putida KT2440 PP_3127 putative Exopolysaccharide transport protein insig. 24 91
o Pseudomonas fluorescens FW300-N2E3 AO353_21125 lipopolysaccharide biosynthesis protein insig. 24 91
  Lysobacter sp. OAE881 ABIE51_RS07945 hypothetical protein insig. 26 56
o Desulfovibrio vulgaris Miyazaki F DvMF_0688 polysaccharide chain length determinant protein, PEP-CTERM locus subfamily (RefSeq) insig. 26 76
o Desulfovibrio vulgaris Hildenborough JW710 DVUA0039 chain length determinant family protein (TIGR) insig. 25 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4081 Uncharacterized protein involved in exopolysaccharide biosynthesis insig. 21 77
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19310 capsular biosynthesis protein strong 23 68
  Bacteroides ovatus ATCC 8483 BACOVA_03686 chain length determinant protein strong 23 67
  Dinoroseobacter shibae DFL-12 Dshi_3388 lipopolysaccharide biosynthesis protein (RefSeq) cofit 24 75
  Bacteroides thetaiotaomicron VPI-5482 BT0482 tyrosine-protein kinase ptk (NCBI ptt file) insig. 23 75
  Agrobacterium fabrum C58 Atu1239 exopolysaccharide production protein insig. 22 64
  Azospirillum sp. SherDot2 MPMX19_04796 hypothetical protein insig. 20 71
  Azospirillum sp. SherDot2 MPMX19_04631 hypothetical protein insig. 21 74
  Bacteroides ovatus ATCC 8483 BACOVA_01735 hypothetical protein insig. 22 65
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17525 tyrosine-protein kinase strong 22 73
  Pseudomonas simiae WCS417 PS417_25115 lipopolysaccharide biosynthesis protein insig. 20 71
  Lysobacter sp. OAE881 ABIE51_RS07940 hypothetical protein no data 31 31
  Caulobacter crescentus NA1000 CCNA_00163 exopolysaccharide transport family protein strong 21 71
  Caulobacter crescentus NA1000 Δfur CCNA_00163 exopolysaccharide transport family protein cofit 21 71
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00970 capsular biosynthesis protein insig. 20 76
  Bacteroides stercoris CC31F HMPREF1181_RS03930 tyrosine-protein kinase insig. 23 67
  Rhodospirillum rubrum S1H Rru_A1490 Protein-tyrosine kinase (NCBI) cofit 21 70
  Bacteroides thetaiotaomicron VPI-5482 BT0614 putative tyrosine-protein kinase in cps region (NCBI ptt file) strong 21 72
  Bacteroides ovatus ATCC 8483 BACOVA_03730 chain length determinant protein insig. 22 67
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17400 tyrosine-protein kinase insig. 22 65
  Phocaeicola dorei CL03T12C01 ABI39_RS13420 polysaccharide biosynthesis tyrosine autokinase insig. 22 65
  Rahnella sp. WP5 EX31_RS02785 polysaccharide biosynthesis tyrosine autokinase cofit 27 24
  Rhodopseudomonas palustris CGA009 TX73_023815 exopolysaccharide transport family protein cofit 22 58
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02185 polysaccharide biosynthesis tyrosine autokinase insig. 18 93
  Cupriavidus basilensis FW507-4G11 RR42_RS33250 tyrosine protein kinase strong 26 46
  Bosea sp. OAE506 ABIE41_RS19295 GumC family protein insig. 23 62
  Phocaeicola dorei CL03T12C01 ABI39_RS11980 tyrosine-protein kinase insig. 21 67
  Azospirillum brasilense Sp245 AZOBR_RS23645 succinoglycan biosynthesis transport protein ExoP insig. 21 73
  Variovorax sp. SCN45 GFF58 Tyrosine-protein kinase (EC 2.7.10.2) insig. 19 75
  Phocaeicola dorei CL03T12C01 ABI39_RS11145 tyrosine-protein kinase sig. 22 67
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5084 Capsular polysaccharide synthesis enzyme CpsD, exopolysaccharide synthesis insig. 20 82
  Bacteroides ovatus ATCC 8483 BACOVA_02474 chain length determinant protein sig. 23 67
  Alteromonas macleodii MIT1002 MIT1002_01612 Tyrosine-protein kinase ptk insig. 22 66
  Bacteroides thetaiotaomicron VPI-5482 BT2862 tyrosine-protein kinase ptk (NCBI ptt file) insig. 20 63
  Acinetobacter radioresistens SK82 MPMX26_00047 Tyrosine-protein kinase ptk strong 20 42
  Herbaspirillum seropedicae SmR1 HSERO_RS09950 chain-length determining protein sig. 25 71
  Bacteroides stercoris CC31F HMPREF1181_RS14865 tyrosine-protein kinase cofit 21 68
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01645 tyrosine-protein kinase insig. 21 64
  Vibrio cholerae E7946 ATCC 55056 CSW01_04800 chain-length determining protein insig. 21 66
  Cupriavidus basilensis FW507-4G11 RR42_RS34470 protein tyrosine kinase insig. 21 75
  Enterobacter asburiae PDN3 EX28DRAFT_0445 capsular exopolysaccharide family insig. 27 26
  Rhodopseudomonas palustris CGA009 TX73_014260 exopolysaccharide transport family protein cofit 22 62
  Pantoea sp. MT58 IAI47_06940 tyrosine-protein kinase Wzc insig. 29 27
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2081.1 Xanthan biosynthesis chain length determinant protein GumC strong 21 61
  Cupriavidus basilensis FW507-4G11 RR42_RS20940 tyrosine protein kinase insig. 26 36
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01820 hypothetical protein insig. 18 68
  Serratia liquefaciens MT49 IAI46_15575 polysaccharide biosynthesis tyrosine autokinase insig. 27 18
  Azospirillum brasilense Sp245 AZOBR_RS03390 protein tyrosine kinase sig. 21 75
  Variovorax sp. OAS795 ABID97_RS19120 polysaccharide biosynthesis tyrosine autokinase strong 20 75
  Erwinia tracheiphila SCR3 LU632_RS08780 wzc tyrosine-protein kinase Wzc strong 28 24
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19085 tyrosine protein kinase insig. 26 36
  Ralstonia solanacearum UW163 UW163_RS20045 tyrosine protein kinase insig. 26 36
  Agrobacterium fabrum C58 Atu4794 polysaccharide biosynthesis protein insig. 21 71
  Escherichia coli ECOR27 NOLOHH_15640 wzc tyrosine-protein kinase Wzc insig. 23 26
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04797 tyrosine-protein kinase Etk/Wzc insig. 26 26
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02695 polysaccharide biosynthesis tyrosine autokinase insig. 23 68
  Azospirillum brasilense Sp245 AZOBR_RS19400 exopolysaccharide biosynthesis protein strong 19 67
  Magnetospirillum magneticum AMB-1 AMB_RS07325 succinoglycan biosynthesis transport protein exoP insig. 18 90
  Paraburkholderia graminis OAS925 ABIE53_006083 tyrosine-protein kinase Etk/Wzc sig. 24 26
  Phocaeicola dorei CL03T12C01 ABI39_RS13695 tyrosine-protein kinase insig. 21 64
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00948 tyrosine-protein kinase Etk/Wzc insig. 23 78
  Escherichia coli BL21 ECD_01966 colanic acid production tyrosine-protein kinase; autokinase; Ugd phosphorylase insig. 23 26
  Escherichia coli ECRC101 OKFHMN_24310 wzc tyrosine-protein kinase Wzc insig. 23 26
  Escherichia coli ECRC101 MCAODC_20630 wzc tyrosine-protein kinase Wzc insig. 23 26
  Escherichia coli ECRC102 NIAGMN_22255 wzc tyrosine-protein kinase Wzc insig. 23 26
  Escherichia coli ECRC62 BNILDI_14550 wzc tyrosine-protein kinase Wzc insig. 23 26
  Escherichia coli ECRC98 JDDGAC_28420 wzc tyrosine-protein kinase Wzc no data 23 26
  Escherichia coli ECRC99 KEDOAH_03840 wzc tyrosine-protein kinase Wzc no data 23 26
  Burkholderia phytofirmans PsJN BPHYT_RS09730 exopolysaccharide biosynthesis protein insig. 23 78
  Paraburkholderia graminis OAS925 ABIE53_002184 tyrosine-protein kinase Etk/Wzc insig. 22 78
  Escherichia coli BL21 ECD_00984 tyrosine-protein kinase, role in O-antigen capsule formation insig. 26 27
  Escherichia coli ECOR27 NOLOHH_21665 etk tyrosine-protein kinase strong 26 27
  Escherichia coli ECRC101 OKFHMN_04765 etk tyrosine-protein kinase strong 26 27
  Escherichia coli ECRC101 MCAODC_24150 etk tyrosine-protein kinase strong 26 27
  Escherichia coli ECRC102 NIAGMN_23085 etk tyrosine-protein kinase strong 26 27
  Escherichia coli ECRC62 BNILDI_19830 etk tyrosine-protein kinase insig. 26 27
  Escherichia coli ECRC98 JDDGAC_08375 etk tyrosine-protein kinase no data 26 27
  Escherichia coli ECRC99 KEDOAH_22980 etk tyrosine-protein kinase no data 26 27
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02684 Tyrosine-protein kinase etk insig. 26 27
  Escherichia coli BW25113 b0981 yccC cryptic autophosphorylating protein tyrosine kinase Etk (NCBI) insig. 26 27
  Paraburkholderia sabiae LMG 24235 QEN71_RS22890 GNVR domain-containing protein insig. 26 38
  Pectobacterium carotovorum WPP14 HER17_RS14600 tyrosine-protein kinase Wzc cofit 25 64
  Escherichia coli ECOR38 HEPCGN_03010 wzc tyrosine-protein kinase Wzc cofit 23 26
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3868 Tyrosine-protein kinase Wzc (EC 2.7.10.2) insig. 22 24
  Azospirillum sp. SherDot2 MPMX19_05625 hypothetical protein insig. 18 67
  Burkholderia phytofirmans PsJN BPHYT_RS04120 protein tyrosine kinase insig. 19 30
  Escherichia coli Nissle 1917 ECOLIN_RS12130 tyrosine-protein kinase Wzc no data 24 18