Homologs of HSERO_RS07870 from Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS07870 ABC transporter permease insig. 100 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS14280 ABC transporter permease insig. 79 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS02350 ABC transporter permease insig. 79 98
o Ralstonia solanacearum UW163 UW163_RS11375 ABC transporter permease no data 79 98
o Cupriavidus basilensis FW507-4G11 RR42_RS10805 ABC transporter permease insig. 82 98
o Ralstonia solanacearum GMI1000 RS_RS09505 ABC transporter permease insig. 79 98
o Ralstonia solanacearum PSI07 RPSI07_RS15020 ABC transporter permease insig. 77 98
o Variovorax sp. SCN45 GFF1509 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) insig. 75 99
o Pseudomonas syringae pv. syringae B728a Psyr_2538 Binding-protein-dependent transport systems inner membrane component insig. 69 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2538 Binding-protein-dependent transport systems inner membrane component insig. 69 100
o Agrobacterium fabrum C58 Atu5254 ABC transporter membrane spanning protein (oligopeptide) no data 63 97
  Ralstonia solanacearum GMI1000 RS_RS14345 ABC transporter permease insig. 62 98
  Ralstonia solanacearum PSI07 RPSI07_RS10840 ABC transporter permease insig. 62 98
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06400 ABC transporter permease insig. 62 98
  Cupriavidus basilensis FW507-4G11 RR42_RS18205 ABC transporter permease insig. 61 98
  Ralstonia solanacearum UW163 UW163_RS07225 ABC transporter permease insig. 61 98
o Pectobacterium carotovorum WPP14 HER17_RS00110 ABC transporter permease insig. 64 96
o Burkholderia phytofirmans PsJN BPHYT_RS31190 ABC transporter permease insig. 62 99
o Azospirillum brasilense Sp245 AZOBR_RS31010 ABC transporter permease insig. 62 98
o Rahnella sp. WP5 EX31_RS02580 ABC transporter permease insig. 64 93
  Azospirillum brasilense Sp245 AZOBR_RS26725 ABC transporter permease insig. 60 98
o Dickeya dianthicola ME23 DZA65_RS08390 ABC transporter permease insig. 62 96
o Dickeya dadantii 3937 DDA3937_RS08050 ABC transporter permease insig. 62 96
o Dickeya dianthicola 67-19 HGI48_RS07795 ABC transporter permease insig. 62 96
o Bosea sp. OAE506 ABIE41_RS02800 ABC transporter permease cofit 57 95
  Bosea sp. OAE506 ABIE41_RS16710 ABC transporter permease insig. 49 100
o Dechlorosoma suillum PS Dsui_2237 ABC-type dipeptide/oligopeptide/nickel transport system, permease component cofit 56 97
o Sinorhizobium meliloti 1021 SM_b21038 oligopeptidemurein peptide ABC transporter permease insig. 46 96
o Dinoroseobacter shibae DFL-12 Dshi_0881 binding-protein-dependent transport systems inner membrane component (RefSeq) sig. 45 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1370 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) cofit 46 99
  Variovorax sp. SCN45 GFF5252 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) insig. 45 99
o Phaeobacter inhibens DSM 17395 PGA1_c06790 putative peptide ABC transporter, permease protein insig. 43 99
  Phaeobacter inhibens DSM 17395 PGA1_262p01030 dipeptide transport system permease protein DppB insig. 41 99
o Variovorax sp. OAS795 ABID97_RS07030 ABC transporter permease cofit 45 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_00920 ABC transporter permease insig. 39 100
o Acidovorax sp. GW101-3H11 Ac3H11_2047 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) cofit 46 98
  Bosea sp. OAE506 ABIE41_RS18005 ABC transporter permease insig. 42 96
  Agrobacterium fabrum C58 Atu4696 oligopeptide ABC transporter permease insig. 42 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU0168 oligopeptide/dipeptide ABC transporter, permease protein (TIGR) insig. 41 100
  Bosea sp. OAE506 ABIE41_RS23470 ABC transporter permease insig. 40 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05803 dipeptide transport system permease protein sig. 42 93
o Desulfovibrio vulgaris Miyazaki F DvMF_1828 binding-protein-dependent transport systems inner membrane component (RefSeq) cofit 40 100
  Burkholderia phytofirmans PsJN BPHYT_RS18685 peptide ABC transporter permease insig. 41 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS28700 ABC transporter permease subunit cofit 41 93
  Rhodospirillum rubrum S1H Rru_A2357 Binding-protein-dependent transport systems inner membrane component (NCBI) cofit 39 97
o Marinobacter adhaerens HP15 HP15_201 peptide transport system permease ABC transporter protein cofit 38 98
  Sinorhizobium meliloti 1021 SMc02418 peptide transport system permease ABC transporter protein insig. 40 97
  Pseudomonas syringae pv. syringae B728a Psyr_4239 Binding-protein-dependent transport systems inner membrane component insig. 40 98
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4239 Binding-protein-dependent transport systems inner membrane component insig. 40 98
  Pseudomonas sp. RS175 PFR28_00127 Dipeptide transport system permease protein DppB insig. 40 94
  Azospirillum brasilense Sp245 AZOBR_RS21765 peptide ABC transporter permease strong 41 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1124 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) insig. 40 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_5055 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) strong 40 94
  Dickeya dadantii 3937 DDA3937_RS00465 dipeptide ABC transporter permease DppB sig. 38 93
  Dickeya dianthicola 67-19 HGI48_RS20920 dipeptide ABC transporter permease DppB insig. 38 93
  Pseudomonas fluorescens FW300-N2C3 AO356_07260 peptide ABC transporter permease strong 39 94
  Erwinia tracheiphila SCR3 LU632_RS00270 dppB dipeptide ABC transporter permease DppB insig. 38 93
  Dickeya dianthicola ME23 DZA65_RS21915 dipeptide ABC transporter permease DppB insig. 38 93
  Agrobacterium fabrum C58 Atu4114 dipeptide ABC transporter permease sig. 39 89
  Pseudomonas fluorescens SBW25 PFLU_RS04100 ABC transporter permease subunit insig. 40 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS04100 ABC transporter permease subunit sig. 40 94
  Pseudomonas simiae WCS417 PS417_04060 dipeptide ABC transporter, permease component (from data) strong 40 94
  Azospirillum sp. SherDot2 MPMX19_04418 Dipeptide transport system permease protein DppB cofit 40 89
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3311 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) strong 39 93
  Pseudomonas fluorescens FW300-N2E3 AO353_05395 peptide ABC transporter permease strong 39 94
  Rahnella sp. WP5 EX31_RS05510 dipeptide ABC transporter permease DppB insig. 37 93
  Pseudomonas putida KT2440 PP_0881 dipeptide ABC transporter - putative membrane subunit strong 41 93
  Serratia liquefaciens MT49 IAI46_00480 dipeptide ABC transporter permease DppB insig. 38 93
  Sinorhizobium meliloti 1021 SMc03127 ABC transporter permease insig. 40 96
  Pectobacterium carotovorum WPP14 HER17_RS00225 dipeptide ABC transporter permease DppB cofit 38 93
  Pseudomonas sp. S08-1 OH686_08705 Dipeptide ABC transporter, permease protein DppB cofit 41 89
  Dickeya dadantii 3937 DDA3937_RS08940 ABC transporter permease insig. 39 98
  Enterobacter asburiae PDN3 EX28DRAFT_3803 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cofit 37 93
  Sinorhizobium meliloti 1021 SMc00787 peptide ABC transporter permease cofit 40 89
  Klebsiella michiganensis M5al BWI76_RS26880 dipeptide ABC transporter permease DppB sig. 37 93
  Enterobacter sp. TBS_079 MPMX20_00191 Dipeptide transport system permease protein DppB sig. 37 93
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF476 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) insig. 36 93
  Dickeya dianthicola 67-19 HGI48_RS09010 ABC transporter permease insig. 39 98
  Dickeya dianthicola ME23 DZA65_RS09315 ABC transporter permease insig. 39 98
  Escherichia coli BL21 ECD_03394 dipeptide/heme ABC transporter permease insig. 37 93
  Escherichia fergusonii Becca EFB2_00264 Dipeptide transport system permease protein DppB insig. 37 93
  Escherichia coli ECOR27 NOLOHH_08050 dppB dipeptide ABC transporter permease DppB insig. 37 93
  Escherichia coli ECOR38 HEPCGN_14970 dppB dipeptide ABC transporter permease DppB insig. 37 93
  Escherichia coli ECRC100 OKFHMN_16105 dppB dipeptide ABC transporter permease DppB insig. 37 93
  Escherichia coli ECRC101 MCAODC_06620 dppB dipeptide ABC transporter permease DppB insig. 37 93
  Escherichia coli ECRC102 NIAGMN_13865 dppB dipeptide ABC transporter permease DppB insig. 37 93
  Escherichia coli ECRC62 BNILDI_03510 dppB dipeptide ABC transporter permease DppB insig. 37 93
  Escherichia coli ECRC98 JDDGAC_19735 dppB dipeptide ABC transporter permease DppB cofit 37 93
  Escherichia coli ECRC99 KEDOAH_12045 dppB dipeptide ABC transporter permease DppB no data 37 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00163 Dipeptide transport system permease protein DppB cofit 37 93
  Escherichia coli Nissle 1917 ECOLIN_RS20270 dipeptide ABC transporter permease DppB insig. 37 93
  Escherichia coli BW25113 b3543 dppB dipeptide ABC transporter, membrane subunit (DppB) (from data) sig. 37 93
  Pantoea sp. MT58 IAI47_18645 dipeptide ABC transporter permease DppB insig. 38 93
  Rhizobium sp. OAE497 ABIE40_RS03350 ABC transporter permease subunit insig. 39 89
  Variovorax sp. OAS795 ABID97_RS04450 ABC transporter permease subunit insig. 37 93
  Variovorax sp. SCN45 GFF7284 Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) insig. 37 93
  Sinorhizobium meliloti 1021 SMa0105 ABC transporter permease insig. 41 84
  Azospirillum brasilense Sp245 AZOBR_RS23020 ABC transporter permease insig. 37 98
  Rahnella sp. WP5 EX31_RS10145 ABC transporter permease insig. 38 99
  Rahnella sp. WP5 EX31_RS07505 ABC transporter permease insig. 38 96