| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Herbaspirillum seropedicae SmR1 | HSERO_RS04250 | | C4-dicarboxylate ABC transporter permease | sig. | 100 | 100 |
| o | Dechlorosoma suillum PS | Dsui_3153 | | TRAP transporter, DctM subunit | sig. | 86 | 99 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS09595 | | C4-dicarboxylate ABC transporter permease | sig. | 82 | 99 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS04550 | | C4-dicarboxylate ABC transporter permease | insig. | 82 | 99 |
| o | Rhodospirillum rubrum S1H | Rru_A3676 | | TRAP dicarboxylate transporter, DctM subunit (NCBI) | strong | 84 | 99 |
| o | Azospirillum sp. SherDot2 | MPMX19_00661 | | C4-dicarboxylate TRAP transporter large permease protein DctM | insig. | 81 | 100 |
| o | Rhodopseudomonas palustris CGA009 | TX73_010560 | | TRAP transporter large permease subunit | strong | 76 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_00121 | | C4-dicarboxylate TRAP transporter large permease protein DctM | insig. | 59 | 99 |
| o | Pseudomonas stutzeri RCH2 | Psest_4270 | | TRAP transporter, DctM subunit | strong | 57 | 100 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS05060 | | TRAP transporter large permease | insig. | 60 | 96 |
| o | Shewanella oneidensis MR-1 | SO3136 | dctM | C4-dicarboxylate transport protein (NCBI ptt file) | insig. | 52 | 98 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS16920 | | TRAP transporter large permease | insig. | 56 | 95 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS16920 | | TRAP transporter large permease | strong | 56 | 95 |
| o | Pseudomonas simiae WCS417 | PS417_14900 | | C4-dicarboxylate ABC transporter permease | insig. | 56 | 95 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_09640 | | C4-dicarboxylate ABC transporter permease | insig. | 49 | 100 |
| o | Shewanella sp. ANA-3 | Shewana3_1414 | | TRAP dicarboxylate transporter, DctM subunit (RefSeq) | strong | 49 | 98 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c20660 | | TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, large permease component (from data) | strong | 46 | 99 |
| o | Shewanella amazonensis SB2B | Sama_2211 | | alpha-ketoglutarate TRAP transporter, large permease component (from data) | strong | 50 | 98 |
| o | Shewanella loihica PV-4 | Shew_1444 | | dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), large permease component (from data) | cofit | 49 | 98 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS13970 | | TRAP transporter large permease subunit | insig. | 76 | 50 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS13970 | | TRAP transporter large permease subunit | insig. | 72 | 57 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_163 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 42 | 100 |
| o | Variovorax sp. SCN45 | GFF6470 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 41 | 98 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS12260 | | TRAP transporter large permease | insig. | 41 | 100 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2823 | dctM | TRAP dicarboxylate transporter family protein (TIGR) | insig. | 43 | 96 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1931 | | TRAP dicarboxylate transporter, DctM subunit (RefSeq) | insig. | 40 | 96 |
| o | Enterobacter sp. TBS_079 | MPMX20_04347 | | C4-dicarboxylate TRAP transporter large permease protein DctM | insig. | 39 | 100 |
| o | Variovorax sp. OAS795 | ABID97_RS19635 | | TRAP transporter large permease | insig. | 41 | 98 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS19685 | | TRAP transporter large permease | cofit | 39 | 99 |
| o | Pantoea sp. MT58 | IAI47_03220 | | TRAP transporter large permease | insig. | 39 | 91 |
| o | Rahnella sp. WP5 | EX31_RS08020 | | TRAP transporter large permease | insig. | 38 | 99 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_23045 | | hypothetical protein | insig. | 37 | 100 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3955 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 39 | 99 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS19305 | | TRAP transporter large permease | insig. | 38 | 100 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS19305 | | TRAP transporter large permease | insig. | 38 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_485 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 37 | 91 |
| | Pseudomonas simiae WCS417 | PS417_17380 | | membrane protein | insig. | 38 | 100 |
| o | Sinorhizobium meliloti 1021 | SM_b21436 | | C4-dicarboxylate transport system, permease large protein transmembrane | insig. | 38 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_06063 | | C4-dicarboxylate TRAP transporter large permease protein DctM | insig. | 40 | 99 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2972 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 39 | 95 |
| | Pseudomonas sp. RS175 | PFR28_02440 | | C4-dicarboxylate TRAP transporter large permease protein DctM | strong | 36 | 91 |
| o | Pseudomonas putida KT2440 | PP_1167 | | D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) | strong | 38 | 100 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS34990 | | ABC transporter permease | insig. | 34 | 99 |
| o | Bosea sp. OAE506 | ABIE41_RS07820 | | TRAP transporter large permease | insig. | 37 | 98 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_0898 | | TRAP dicarboxylate transporter, DctM subunit | insig. | 37 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0898 | | TRAP dicarboxylate transporter, DctM subunit | insig. | 37 | 100 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS07855 | | TRAP transporter large permease | insig. | 43 | 98 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4175 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 36 | 96 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03837 | | C4-dicarboxylate TRAP transporter large permease protein DctM | insig. | 38 | 98 |
| | Rhodopseudomonas palustris CGA009 | TX73_009175 | | TRAP transporter permease | insig. | 36 | 98 |
| | Pseudomonas stutzeri RCH2 | Psest_0361 | | TRAP transporter, DctM subunit | insig. | 36 | 100 |
| | Bosea sp. OAE506 | ABIE41_RS01370 | | TRAP transporter large permease | insig. | 34 | 98 |
| o | Escherichia coli ECRC62 | BNILDI_07135 | | TRAP transporter large permease | insig. | 38 | 98 |
| | Azospirillum brasilense Sp245 | AZOBR_RS15920 | | Large component of TRAP-type D-gluconate transporter (from data) | strong | 38 | 92 |
| o | Agrobacterium fabrum C58 | Atu2743 | | hypothetical protein | insig. | 35 | 96 |
| | Bosea sp. OAE506 | ABIE41_RS18670 | | TRAP transporter large permease | insig. | 39 | 96 |
| | Sinorhizobium meliloti 1021 | SM_b20297 | | permease | insig. | 35 | 97 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_2753 | | TRAP dicarboxylate transporter, DctM subunit (RefSeq) | insig. | 39 | 91 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3227 | | gluconate TRAP transporter, large permease component (from data) | strong | 35 | 97 |
| o | Alteromonas macleodii MIT1002 | MIT1002_02428 | | Neu5Ac permease | insig. | 37 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_05867 | | Sialic acid TRAP transporter large permease protein SiaM | insig. | 37 | 96 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF795 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 34 | 99 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_08915 | | ABC transporter permease | insig. | 36 | 97 |
| | Agrobacterium fabrum C58 | Atu3135 | | ABC transporter permease | strong | 37 | 98 |
| | Sinorhizobium meliloti 1021 | SMa0250 | | dedA-like protein | insig. | 36 | 95 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1832 | | TRAP dicarboxylate transporter, DctM subunit (RefSeq) | sig. | 34 | 96 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS17390 | | TRAP transporter large permease subunit | insig. | 39 | 97 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3520 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 36 | 96 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5230 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 37 | 96 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1228 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 36 | 95 |
| o | Escherichia coli ECOR27 | NOLOHH_11090 | dctQ | Tripartite ATP-independent periplasmic transporter, DctM component | cofit | 37 | 99 |
| o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3627 | | TRAP transporter, DctM subunit | insig. | 38 | 99 |
| o | Klebsiella michiganensis M5al | BWI76_RS24135 | | c4-dicarboxylate permease | insig. | 37 | 99 |
| | Bosea sp. OAE506 | ABIE41_RS08865 | | TRAP transporter large permease | insig. | 37 | 97 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2137 | | TRAP dicarboxylate transporter, DctM subunit (RefSeq) | cofit | 38 | 99 |
| | Sinorhizobium meliloti 1021 | SM_b20444 | | hypothetical protein | insig. | 33 | 96 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0956 | | TRAP dicarboxylate transporter, DctM subunit (RefSeq) | insig. | 35 | 96 |
| | Dechlorosoma suillum PS | Dsui_2534 | | TRAP transporter, DctM subunit | cofit | 37 | 98 |
| | Azospirillum brasilense Sp245 | AZOBR_RS26625 | | dehydroascorbate transporter | insig. | 35 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_25640 | | L-dehydroascorbate transporter large permease subunit | insig. | 35 | 91 |
| | Bosea sp. OAE506 | ABIE41_RS23665 | | TRAP transporter large permease | insig. | 33 | 98 |
| o | Caulobacter crescentus NA1000 | CCNA_01515 | | C4-dicarboxylate transporter large subunit | sig. | 37 | 96 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_01515 | | C4-dicarboxylate transporter large subunit | cofit | 37 | 96 |
| | Sinorhizobium meliloti 1021 | SM_b21351 | | C4-dicarboxylate large membrane transport protein | insig. | 37 | 99 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5506 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 35 | 97 |
| | Variovorax sp. OAS795 | ABID97_RS10330 | | TRAP transporter large permease | strong | 34 | 95 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1781 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 39 | 98 |
| | Pseudomonas sp. RS175 | PFR28_01613 | | Sialic acid TRAP transporter large permease protein SiaM | insig. | 35 | 95 |
| o | Escherichia fergusonii Becca | EFB2_00228 | | Sialic acid TRAP transporter large permease protein SiaM | insig. | 34 | 98 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS20465 | | 2,3-diketo-L-gulonate TRAP transporter large permease YiaN | insig. | 34 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_05803 | | C4-dicarboxylate TRAP transporter large permease protein DctM | insig. | 33 | 100 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2273 | | Predicted rhamnogalacturonide-specific TRAP-type transporter, large transmembrane component RhiC | insig. | 33 | 98 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF174 | | TRAP-type C4-dicarboxylate transport system, large permease component | no data | 37 | 97 |
| | Variovorax sp. OAS795 | ABID97_RS26070 | | TRAP transporter large permease subunit | no data | 37 | 96 |
| o | Rhizobium sp. OAE497 | ABIE40_RS25810 | | TRAP transporter large permease | insig. | 32 | 96 |
| | Bosea sp. OAE506 | ABIE41_RS06675 | | TRAP transporter large permease | insig. | 36 | 98 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00126 | | Sialic acid TRAP transporter large permease protein SiaM | cofit | 35 | 93 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1302 | | TRAP-type C4-dicarboxylate transport system, large permease component | insig. | 35 | 91 |
| | Variovorax sp. SCN45 | GFF1830 | | TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 | insig. | 33 | 99 |
| | Sinorhizobium meliloti 1021 | SM_b20979 | | large C4-dicarboxylate uptake permease, DedA family protein | insig. | 36 | 93 |