Homologs of GFF890 from Methylophilus sp. DMC18

HTH-type transcriptional activator RhaR
SEED: Uncharacterized protein ygiV
KEGG: AraC family transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Methylophilus sp. DMC18 GFF890 HTH-type transcriptional activator RhaR insig. 100 100
o Dechlorosoma suillum PS Dsui_2034 DNA gyrase inhibitor insig. 65 100
o Herbaspirillum seropedicae SmR1 HSERO_RS19895 AraC family transcriptional regulator insig. 63 100
o Azospirillum sp. SherDot2 MPMX19_01363 HTH-type transcriptional activator RhaS insig. 53 100
o Rahnella sp. WP5 EX31_RS13520 AraC family transcriptional regulator insig. 51 100
o Shewanella loihica PV-4 Shew_0371 AraC family transcriptional regulator (RefSeq) insig. 48 100
o Pseudomonas sp. RS175 PFR28_02003 HTH-type transcriptional activator RhaR insig. 50 97
o Pseudomonas fluorescens FW300-N2E3 AO353_28535 AraC family transcriptional regulator insig. 51 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3136 Uncharacterized protein ygiV insig. 49 100
o Pseudomonas simiae WCS417 PS417_01425 AraC family transcriptional regulator insig. 51 97
o Klebsiella pneumoniae MKP103 KDGMDA_05170 AraC family transcriptional regulator insig. 51 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_83 transcriptional regulator, AraC family insig. 50 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02865 HTH-type transcriptional activator RhaR insig. 48 100
o Pseudomonas sp. SVBP6 COO64_RS23290 GyrI-like domain-containing protein insig. 50 97
o Pseudomonas putida KT2440 PP_2173 Transcriptional regulator, AraC family sig. 47 100
o Pseudomonas fluorescens SBW25 PFLU_RS18330 AraC family transcriptional regulator insig. 50 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18330 AraC family transcriptional regulator insig. 50 97
o Pectobacterium carotovorum WPP14 HER17_RS19395 AraC family transcriptional regulator cofit 48 100
o Shewanella amazonensis SB2B Sama_0076 transcription activator, effector binding (RefSeq) insig. 46 96
o Ralstonia solanacearum PSI07 RPSI07_RS23330 AraC family transcriptional regulator insig. 44 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS05545 AraC family transcriptional regulator insig. 44 95
o Ralstonia solanacearum GMI1000 RS_RS00650 AraC family transcriptional regulator insig. 44 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10040 AraC family transcriptional regulator insig. 43 97
o Ralstonia solanacearum UW163 UW163_RS03540 AraC family transcriptional regulator insig. 43 97
o Xanthobacter sp. DMC5 GFF3513 HTH-type transcriptional activator RhaS insig. 40 100
o Caulobacter crescentus NA1000 CCNA_02611 AraC-family transcriptional regulator insig. 40 100
o Caulobacter crescentus NA1000 Δfur CCNA_02611 AraC-family transcriptional regulator cofit 40 100
o Pseudomonas fluorescens FW300-N2C3 AO356_23800 AraC family transcriptional regulator insig. 40 98
  Azospirillum sp. SherDot2 MPMX19_02438 DNA gyrase inhibitor insig. 34 97
  Escherichia coli Nissle 1917 ECOLIN_RS17415 GyrI-like domain-containing protein insig. 48 55
  Escherichia coli ECOR38 HEPCGN_17750 ygiV putative transcriptional regulator YgiV insig. 47 55
  Escherichia fergusonii Becca EFB2_00790 DNA gyrase inhibitor insig. 48 55
  Escherichia coli ECOR27 NOLOHH_10670 ygiV putative transcriptional regulator YgiV insig. 48 55
  Escherichia coli ECRC62 BNILDI_00845 ygiV putative transcriptional regulator YgiV insig. 48 55
  Escherichia coli BL21 ECD_02895 transcriptional repressor for mcbR biofilm gene insig. 47 55
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00679 DNA gyrase inhibitor insig. 47 55
  Escherichia coli BW25113 b3023 ygiV predicted transcriptional regulator (NCBI) insig. 47 55
  Escherichia coli ECRC100 OKFHMN_18890 ygiV putative transcriptional regulator YgiV insig. 47 55
  Escherichia coli ECRC101 MCAODC_09405 ygiV putative transcriptional regulator YgiV insig. 47 55
  Escherichia coli ECRC102 NIAGMN_16655 ygiV putative transcriptional regulator YgiV insig. 47 55
  Escherichia coli ECRC98 JDDGAC_22525 ygiV putative transcriptional regulator YgiV insig. 47 55
  Escherichia coli ECRC99 KEDOAH_09255 ygiV putative transcriptional regulator YgiV no data 47 55
o Variovorax sp. SCN45 GFF3429 Transcriptional regulator, AraC family insig. 33 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4190 transcriptional regulator, AraC family insig. 32 97
o Cupriavidus basilensis FW507-4G11 RR42_RS22525 AraC family transcriptional regulator insig. 29 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS00025 AraC family transcriptional regulator insig. 32 97
o Burkholderia phytofirmans PsJN BPHYT_RS00095 AraC family transcriptional regulator insig. 30 100
o Azospirillum brasilense Sp245 AZOBR_RS00835 transcriptional regulator insig. 32 97
  Pseudomonas sp. SVBP6 COO64_RS14840 GyrI-like domain-containing protein insig. 30 95
o Rhizobium sp. OAE497 ABIE40_RS10300 AraC family transcriptional regulator insig. 31 100
  Magnetospirillum magneticum AMB-1 AMB_RS13870 DNA gyrase inhibitor cofit 38 53
o Phaeobacter inhibens DSM 17395 PGA1_c30530 HTH-type transcriptional regulator, AraC family insig. 30 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4832 transcriptional regulator, AraC type; possible DNA gyrase inhibitor insig. 30 97
  Variovorax sp. SCN45 GFF1185 Transcriptional regulator, AraC family insig. 32 90
o Bacteroides thetaiotaomicron VPI-5482 BT2372 transcriptional regulator (NCBI ptt file) sig. 29 99
o Desulfovibrio vulgaris Hildenborough JW710 DVU0277 transcriptional regulator, AraC family (TIGR) insig. 23 97
o Rhodopseudomonas palustris CGA009 TX73_004525 AraC family transcriptional regulator insig. 28 97
  Bacteroides ovatus ATCC 8483 BACOVA_03043 transcriptional regulator, effector binding domain protein insig. 27 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1401.1 hypothetical protein sig. 27 90
  Ralstonia solanacearum GMI1000 RS_RS23160 AraC family transcriptional regulator insig. 26 100
  Cupriavidus basilensis FW507-4G11 RR42_RS20800 AraC family transcriptional regulator insig. 26 100
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS17815 bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase insig. 26 100
  Ralstonia solanacearum UW163 UW163_RS21325 bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase insig. 26 100
  Burkholderia phytofirmans PsJN BPHYT_RS26630 AraC family transcriptional regulator insig. 27 100
  Bacteroides thetaiotaomicron VPI-5482 BT1904 transcriptional regulator, AraC-type (NCBI ptt file) insig. 25 99
  Ralstonia solanacearum PSI07 RPSI07_RS05745 transcription regulator protein insig. 26 100
  Rahnella sp. WP5 EX31_RS03965 MDR efflux pump AcrAB transcriptional activator RobA insig. 25 97
  Bacteroides thetaiotaomicron VPI-5482 BT4142 conserved hypothetical protein (NCBI ptt file) insig. 27 100
  Pectobacterium carotovorum WPP14 HER17_RS02770 MDR efflux pump AcrAB transcriptional activator RobA insig. 25 84
  Bacteroides ovatus ATCC 8483 BACOVA_01480 transcriptional regulator, effector binding domain protein insig. 26 99
o Serratia liquefaciens MT49 IAI46_03005 MDR efflux pump AcrAB transcriptional activator RobA insig. 26 84
o Dickeya dianthicola ME23 DZA65_RS19505 MDR efflux pump AcrAB transcriptional activator RobA sig. 25 84
  Klebsiella pneumoniae MKP103 KDGMDA_12470 MDR efflux pump AcrAB transcriptional activator RobA insig. 26 84
o Dickeya dianthicola 67-19 HGI48_RS18365 MDR efflux pump AcrAB transcriptional activator RobA cofit 25 84
  Enterobacter asburiae PDN3 EX28DRAFT_3606 AraC-type DNA-binding domain-containing proteins insig. 30 56
  Dickeya dadantii 3937 DDA3937_RS18435 MDR efflux pump AcrAB transcriptional activator RobA insig. 35 38
  Enterobacter sp. TBS_079 MPMX20_00703 Right origin-binding protein sig. 30 56
o Klebsiella michiganensis M5al BWI76_RS04205 right oriC-binding transcriptional activator sig. 25 84
  Escherichia coli BL21 ECD_04272 right oriC-binding transcriptional activator, AraC family insig. 28 56
  Escherichia coli ECOR27 NOLOHH_03480 robA MDR efflux pump AcrAB transcriptional activator RobA cofit 28 56
  Escherichia coli ECOR38 HEPCGN_09155 robA MDR efflux pump AcrAB transcriptional activator RobA insig. 28 56
  Escherichia coli ECRC100 OKFHMN_11150 robA MDR efflux pump AcrAB transcriptional activator RobA insig. 28 56
  Escherichia coli ECRC101 MCAODC_01665 robA MDR efflux pump AcrAB transcriptional activator RobA strong 28 56
  Escherichia coli ECRC102 NIAGMN_09000 robA MDR efflux pump AcrAB transcriptional activator RobA insig. 28 56
  Escherichia coli ECRC62 BNILDI_08120 robA MDR efflux pump AcrAB transcriptional activator RobA cofit 28 56
  Escherichia coli ECRC98 JDDGAC_14745 robA MDR efflux pump AcrAB transcriptional activator RobA insig. 28 56
  Escherichia coli ECRC99 KEDOAH_17005 robA MDR efflux pump AcrAB transcriptional activator RobA no data 28 56
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03665 Right origin-binding protein insig. 28 56
  Escherichia coli Nissle 1917 ECOLIN_RS25230 MDR efflux pump AcrAB transcriptional activator RobA insig. 28 56
  Escherichia coli BW25113 b4396 rob DNA-binding transcriptional activator (NCBI) strong 28 56
  Paraburkholderia sabiae LMG 24235 QEN71_RS16105 AraC family transcriptional regulator insig. 27 95
  Desulfovibrio vulgaris Miyazaki F DvMF_1576 transcriptional regulator, AraC family (RefSeq) insig. 25 87
o Bacteroides stercoris CC31F HMPREF1181_RS07810 AraC family transcriptional regulator insig. 25 100
  Escherichia fergusonii Becca EFB2_04048 Right origin-binding protein insig. 28 56
  Erwinia amylovora T8 OLJFJH_01510 MDR efflux pump AcrAB transcriptional activator RobA sig. 31 57
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_06315 robA MDR efflux pump AcrAB transcriptional activator RobA cofit 30 48
  Erwinia tracheiphila SCR3 LU632_RS02595 robA MDR efflux pump AcrAB transcriptional activator RobA sig. 30 48
o Bifidobacterium breve UCC2003 BBR_RS14655 AraC family transcriptional regulator strong 28 96
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21865 MDR efflux pump AcrAB transcriptional activator RobA cofit 34 42
  Pantoea sp. MT58 IAI47_16240 MDR efflux pump AcrAB transcriptional activator RobA sig. 34 42