Homologs of GFF5314 from Sphingobium sp. HT1-2

hypothetical protein
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF5314 hypothetical protein cofit 100 100
o Caulobacter crescentus NA1000 CCNA_01032 RNA polymerase ECF-type sigma factor cofit 42 95
o Caulobacter crescentus NA1000 Δfur CCNA_01032 RNA polymerase ECF-type sigma factor cofit 42 95
  Variovorax sp. SCN45 GFF2401 hypothetical protein insig. 35 96
  Sphingobium sp. HT1-2 GFF4047 RNA polymerase ECF-type sigma factor cofit 38 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0766 RNA polymerase sigma factor, sigma-70 family insig. 35 87
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0584 RNA polymerase sigma factor, sigma-70 family insig. 34 84
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09360 RNA polymerase sigma factor insig. 38 69
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02400 RNA polymerase sigma factor cofit 30 72
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 38 71
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 39 71
  Sphingobium sp. HT1-2 GFF5276 RNA polymerase, sigma-24 subunit, ECF subfamily cofit 30 81
  Pseudomonas sp. BP01 JOY50_RS02475 sigma-70 family RNA polymerase sigma factor no data 36 71
  Sphingobium sp. HT1-2 GFF1845 hypothetical protein cofit 32 90
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0778 RNA polymerase sigma factor, sigma-70 family insig. 34 74
  Pseudomonas sp. BP01 JOY50_RS18970 sigma-70 family RNA polymerase sigma factor insig. 35 75
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 30 89
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 34 66
  Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 37 68
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1181 FIG006045: Sigma factor, ECF subfamily insig. 33 87
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 31 70
  Pseudomonas simiae WCS417 PS417_09655 RNA polymerase sigma factor insig. 33 66
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 33 70
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 32 70
  Sphingobium sp. HT1-2 GFF4091 hypothetical protein insig. 33 77
  Pseudomonas orientalis W4I3 QF045_RS09635 RNA polymerase sigma factor insig. 28 89
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09455 RNA polymerase sigma factor insig. 29 83
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02135 putative RNA polymerase sigma factor FecI cofit 33 66
  Pseudomonas sp. SVBP6 COO64_RS16360 RNA polymerase sigma factor sig. 29 70
  Variovorax sp. SCN45 GFF4261 RNA polymerase ECF-type sigma factor insig. 34 65
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0532 RNA polymerase sigma factor, sigma-70 family insig. 32 73
  Sphingobium sp. HT1-2 GFF2715 sigma factor insig. 36 71
  Pseudomonas putida KT2440 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily strong 33 71
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06665 RNA polymerase sigma factor insig. 31 73
  Ralstonia solanacearum UW163 UW163_RS06960 RNA polymerase sigma factor insig. 31 73
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 33 70
  Sphingobium sp. HT1-2 GFF3691 RNA polymerase ECF-type sigma factor cofit 32 73
  Pseudomonas stutzeri RCH2 Psest_0650 RNA polymerase sigma factor, sigma-70 family insig. 31 66
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01536 hypothetical protein cofit 29 75
  Alteromonas macleodii MIT1002 MIT1002_03920 putative RNA polymerase sigma factor FecI cofit 28 74
  Pseudomonas aeruginosa MRSN321 DY961_RS18835 RNA polymerase sigma factor sig. 31 69
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma no data 31 69
  Pseudomonas aeruginosa PUPa3 DQ20_RS52975 RNA polymerase sigma factor insig. 31 69
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 35 81
  Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 34 66
  Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 31 70
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09435 RNA polymerase sigma factor insig. 31 74
  Alteromonas macleodii MIT1002 MIT1002_01237 Sigma-24 cofit 30 81
  Pseudomonas fluorescens SBW25 PFLU_RS06940 sigma-70 family RNA polymerase sigma factor insig. 29 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06940 sigma-70 family RNA polymerase sigma factor sig. 29 89
  Sphingobium sp. HT1-2 GFF5333 sigma factor cofit 34 79
  Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 33 75
  Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 32 66
  Sphingobium sp. HT1-2 GFF5162 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 30 80
  Phocaeicola dorei CL03T12C01 ABI39_RS03415 RNA polymerase sigma-70 factor insig. 30 77
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily insig. 30 66
  Pseudomonas sp. SVBP6 COO64_RS18805 sigma-70 family RNA polymerase sigma factor insig. 30 77
  Variovorax sp. SCN45 GFF1645 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 26 73
  Variovorax sp. SCN45 GFF2440 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 35 66
  Pseudomonas sp. DMC3 GFF1889 putative RNA polymerase sigma factor FecI cofit 30 70
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09540 sigma-70 family RNA polymerase sigma factor no data 28 72
  Pseudomonas sp. SVBP6 COO64_RS02925 RNA polymerase sigma factor insig. 33 71
  Bacteroides ovatus ATCC 8483 BACOVA_02944 RNA polymerase sigma-70 factor insig. 33 69
  Pseudomonas orientalis W4I3 QF045_RS19140 sigma-70 family RNA polymerase sigma factor insig. 32 75
  Lysobacter sp. OAE881 ABIE51_RS06950 RNA polymerase sigma factor strong 31 87
  Pseudomonas fluorescens FW300-N2C3 AO356_21175 RNA polymerase subunit sigma strong 30 70
  Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 32 71
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 32 71
  Pseudomonas sp. SVBP6 COO64_RS22780 RNA polymerase sigma factor insig. 32 75
  Pseudomonas aeruginosa MRSN321 DY961_RS13375 sigma-70 family RNA polymerase sigma factor insig. 31 69
  Pseudomonas aeruginosa PA14 IKLFDK_20100 RNA polymerase subunit sigma sig. 31 69
  Pseudomonas aeruginosa PUPa3 DQ20_RS48675 sigma-70 family RNA polymerase sigma factor insig. 31 69
  Methylophilus sp. DMC18 GFF1078 hypothetical protein insig. 30 66
  Azospirillum brasilense Sp245 AZOBR_RS30810 RNA polymerase sigma70 insig. 34 87
  Pseudomonas sp. RS175 PFR28_00232 putative RNA polymerase sigma factor FecI insig. 28 73
  Rhodopseudomonas palustris CGA009 TX73_016965 RNA polymerase sigma factor insig. 34 76
  Pseudomonas fluorescens SBW25 PFLU_RS27705 RNA polymerase sigma factor insig. 31 73
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27705 RNA polymerase sigma factor insig. 31 73
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 31 71
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 30 70
  Ralstonia solanacearum GMI1000 RS_RS14615 RNA polymerase sigma factor insig. 28 73
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3041 RNA polymerase sigma factor, sigma-70 family insig. 30 75
  Ralstonia solanacearum PSI07 RPSI07_RS10560 RNA polymerase sigma factor insig. 27 73
  Pseudomonas fluorescens FW300-N2C3 AO356_21710 RNA polymerase subunit sigma insig. 33 70
  Bacteroides stercoris CC31F HMPREF1181_RS02545 sigma-70 family RNA polymerase sigma factor insig. 31 76
  Pseudomonas sp. BP01 JOY50_RS12920 RNA polymerase sigma factor insig. 30 75
  Variovorax sp. SCN45 GFF791 RNA polymerase sigma factor RpoE insig. 30 70
  Pseudomonas orientalis W4I3 QF045_RS08085 sigma-70 family RNA polymerase sigma factor insig. 28 66
  Pseudomonas aeruginosa PUPa3 DQ20_RS41200 RNA polymerase sigma factor insig. 32 71
  Pseudomonas syringae pv. syringae B728a Psyr_1040 RNA polymerase sigma factor, ECF subfamily strong 28 69
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1040 RNA polymerase sigma factor, ECF subfamily insig. 28 69
  Pseudomonas orientalis W4I3 QF045_RS00470 RNA polymerase sigma factor insig. 31 73
  Serratia liquefaciens MT49 IAI46_11745 sigma-70 family RNA polymerase sigma factor no data 29 69
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01226 putative RNA polymerase sigma factor FecI cofit 28 66
  Pseudomonas aeruginosa MRSN321 DY961_RS22365 RNA polymerase sigma factor insig. 30 72
  Pseudomonas aeruginosa PA14 IKLFDK_23065 RNA polymerase sigma factor sig. 30 72
  Pseudomonas aeruginosa PUPa3 DQ20_RS36960 RNA polymerase sigma factor insig. 30 72
  Cupriavidus basilensis FW507-4G11 RR42_RS31145 RNA polymerase sigma factor insig. 29 66
  Azospirillum brasilense Sp245 AZOBR_RS29160 putative RNA polymerase sigma-70 factor ECF subfamily insig. 29 88
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 28 76